PEQ_0000660801 (Parascaris equorum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 PEQ_0000660801 T235683_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Six4
M00563_2.00 		Drosophila melanogaster
NNDANMHNN
NNDKNTHNN		 PBM
Busser et al.(2012a)
Six4 		0.613 0.604
Six4
M06530_2.00 		Drosophila melanogaster
TGABAC
GTVTCA		 B1H
Mathelier et al.(2014)
MA0204.1 		0.613 0.604
Six4
M06334_2.00 		Drosophila melanogaster
WDDTGABAC
GTVTCAHHW		 B1H
Zhu et al.(2011)
Six4_Cell_FBgn0027364 		0.613 0.604
Six4
M06335_2.00 		Drosophila melanogaster
NTGAKACB
VGTMTCAN		 B1H
Zhu et al.(2011)
Six4_SOLEXA_2_FBgn0027364 		0.613 0.604
Six4
M06336_2.00 		Drosophila melanogaster
NNNTGABA
TVTCANNN		 B1H
Zhu et al.(2011)
Six4_SOLEXA_FBgn0027364 		0.613 0.604
Six4
M00461_2.00 		Mus musculus
NNKABMHNN
NNDKVTMNN		 PBM
Berger et al.(2008)
Six4_2860 		0.605 0.562
SIX4
M04939_2.00 		Homo sapiens
NVYGATACVB
VBGTATCRBN		 SELEX
Yin et al.(2017)
SIX4_eDBD_HT-SELEX 		0.605 0.562
Six4
M09198_2.00 		Mus musculus
DGDAABHNSASNNN
NNNSTSNDVTTHCH		 Misc
Kulakovskiy et al.(2013)
SIX4_MOUSE.H11MO.0.C 		0.605 0.562
SIX4
M10646_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX4_Q3 		0.605 0.562
SIX4
M04940_2.00 		Homo sapiens
NBGTAWCRHN
NDYGWTACVN		 SELEX
Yin et al.(2017)
SIX4_eDBD_Methyl-HT-SELEX 		0.605 0.562
SIX5
M08208_2.00 		Homo sapiens
GARWTGTAGT
ACTACAWYTC		 ChIP-seq
Contrino et al.(2012)
Mv121 		0.600 0.542
SIX5
M08209_2.00 		Homo sapiens
GGAGTTGT
ACAACTCC		 ChIP-seq
Contrino et al.(2012)
Mv123 		0.600 0.542
SIX5
M10738_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX5_01 		0.600 0.542
SIX5
M10739_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX5_02 		0.600 0.542
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PEQ_0000660801-mRNA-1 Homeodomain 95 142

Links

Other Homeodomain family TFs
Other Parascaris equorum TFs

184 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCNE_0000507501 Toxocara canis TCNE_0000507501 N 0.808
TCLT_0000291601 Thelazia callipaeda TCLT_0000291601 I 0.777
PXEA_0002133501 Protopolystoma xenopodis PXEA_0002133501 I 0.774
SVUK_0002108701 Strongylus vulgaris SVUK_0002108701 N 0.754
CJA17634 Caenorhabditis japonica CJA17634 I 0.732
BTMF_0000534901 Brugia timori BTMF_0000534901 N 0.716
HelroG92182 Helobdella robusta HelroG92182 N 0.704
YQE_03710 Dendroctonus ponderosae YQE_03710 I 0.701
ANCDUO_23484 Ancylostoma duodenale ANCDUO_23484 N 0.697
nLs.2.1.2.g03086 Litomosoides sigmodontis nLs.2.1.2.g03086 I 0.694
TCLT_0000938801 Thelazia callipaeda TCLT_0000938801 N 0.694
ANCCEY_01677 Ancylostoma ceylanicum ANCCEY_01677 N 0.693
EEL_0000988301 Elaeophora elaphi EEL_0000988301 N 0.690
snap_masked-nMf.1.1.scaf01656-processed-gene-0.6 Meloidogyne floridensis snap_masked-nMf.1.1.scaf01656-processed-gene-0.6 N 0.690
Bm522 Brugia malayi Bm522 N 0.686
WBGene00242653 Onchocerca volvulus WBGene00242653 N 0.686
ENSMMUP00000024349 Macaca fascicularis ENSMMUP00000024349 N 0.678
PEQ_0000211101 Parascaris equorum PEQ_0000211101 N 0.672
L898_g28442 Steinernema monticolum L898_g28442 I 0.651
PEQ_0000072101 Parascaris equorum PEQ_0000072101 N 0.644
maker-nMf.1.1.scaf08801-snap-gene-0.8 Meloidogyne floridensis maker-nMf.1.1.scaf08801-snap-gene-0.8 N 0.636
SNAPOd2T00005340001 Oikopleura dioica SNAPOd2T00005340001 N 0.634
CBG06764 Caenorhabditis briggsae CBG06764 I 0.632
CBN13130 Caenorhabditis brenneri CBN13130 I 0.632
ceh-33 Caenorhabditis elegans WBGene00000454 I 0.632
six9 Oryzias latipes ENSORLG00000006757 I 0.622
ENSTTRG00000001084 Tursiops truncatus ENSTTRG00000001084 I 0.621
HETIRDRAFT_166553 Heterobasidion irregulare HETIRDRAFT_166553 N 0.621
fgenesh3_kg.1__236__4585_0_CCPA2104.b1_CCOZ_CCPA_CCPB_CCPC_EXTA Heterobasidion annosum fgenesh3_kg.1__236__4585_0_CCPA2104.b1_CCOZ_CCPA_CCPB_CCPC_EXTA N 0.621
CapteG227938 Capitella teleta CapteG227938 I 0.616
LotgiG115798 Lottia gigantea LotgiG115798 I 0.616
SMAR005228 Strigamia maritima SMAR005228 I 0.616
Ocbimv22032757m.g Octopus bimaculoides Ocbimv22032757m.g I 0.616
EmuJ_000130200 Echinococcus multilocularis EmuJ_000130200 I 0.616
HDID_0000865801 Hymenolepis diminuta HDID_0000865801 I 0.616
HmN_000307400 Hymenolepis microstoma HmN_000307400 I 0.616
tetur06g00560 Tetranychus urticae tetur06g00560 I 0.615
Six4 Drosophila melanogaster FBgn0027364 D 0.613
GA17741 Drosophila pseudoobscura FBgn0077751 I 0.613
GF24111 Drosophila ananassae FBgn0101105 I 0.613
GG13283 Drosophila erecta FBgn0105555 I 0.613
GH14784 Drosophila grimshawi FBgn0122260 I 0.613
GI11887 Drosophila mojavensis FBgn0134645 I 0.613
GM22186 Drosophila sechellia FBgn0177057 I 0.613
GD12161 Drosophila simulans FBgn0183898 I 0.613
GJ13766 Drosophila virilis FBgn0200986 I 0.613
GK12359 Drosophila willistoni FBgn0214369 I 0.613
GE22381 Drosophila yakuba FBgn0239604 I 0.613
GE22732 Drosophila yakuba FBgn0239938 I 0.613
MDOA003378 Musca domestica MDOA003378 I 0.613
CpipJ_CPIJ007957 Culex pipiens CpipJ_CPIJ007957 I 0.612
AAEL010327 Aedes aegypti AAEL010327 I 0.612
ACEP26590 Atta cephalotes ACEP26590 I 0.612
ADAC000140 Anopheles darlingi ADAC000140 I 0.612
AGAP011065 Anopheles gambiae AGAP011065 I 0.612
AGAP011067 Anopheles gambiae AGAP011067 I 0.612
BGIBMGA000091 Bombyx mori BGIBMGA000091 I 0.612
CGI_10022945 Crassostrea gigas CGI_10022945 I 0.612
CPIJ007957 Culex quinquefasciatus CPIJ007957 I 0.612
KGM_20665 Danaus plexippus KGM_20665 I 0.612
MCINX003783 Melitaea cinxia MCINX003783 I 0.612
SINV15566 Solenopsis invicta SINV15566 I 0.612
Cflo_08297--XP_001120698.1_APIME Camponotus floridanus Cflo_08297--XP_001120698.1_APIME I 0.612
Hsal_06384--XP_001120698.1_APIME Harpegnathos saltator Hsal_06384--XP_001120698.1_APIME I 0.612
SMU15013596 Schmidtea mediterranea SMU15013596 I 0.612
AALB010817 Anopheles albimanus AALB010817 I 0.612
AARA005499 Anopheles arabiensis AARA005499 I 0.612
AATE008460 Anopheles atroparvus AATE008460 I 0.612
ACOM023033 Anopheles coluzzii ACOM023033 I 0.612
ACUA023926 Anopheles culicifacies ACUA023926 I 0.612
ADIR002306 Anopheles dirus ADIR002306 I 0.612
AEPI002096 Anopheles epiroticus AEPI002096 I 0.612
AFAF011509 Anopheles farauti AFAF011509 I 0.612
AFUN004151 Anopheles funestus AFUN004151 I 0.612
AMEC008377 Anopheles melas AMEC008377 I 0.612
AMEM005184 Anopheles merus AMEM005184 I 0.612
AMIN008523 Anopheles minimus AMIN008523 I 0.612
AQUA001156 Anopheles quadriannulatus AQUA001156 I 0.612
ASIS016521 Anopheles sinensis ASIS016521 I 0.612
ASTEI05569 Anopheles stephensi ASTEI05569 I 0.612
GL12751 Drosophila persimilis FBgn0150357 I 0.611
ISCW023235 Ixodes scapularis ISCW023235 I 0.611
NV11991 Nasonia vitripennis NV11991 I 0.611
HelroG183929 Helobdella robusta HelroG183929 N 0.610
DME_0000792901 Dracunculus medinensis DME_0000792901 I 0.606
ENSAMEG00000002968 Ailuropoda melanoleuca ENSAMEG00000002968 I 0.605
ENSAPLG00000008107 Anas platyrhynchos ENSAPLG00000008107 I 0.605
SIX4 Canis familiaris ENSCAFG00000015627 I 0.605
SIX4 Callithrix jacchus ENSCJAG00000019133 I 0.605
ENSCPOG00000014392 Cavia porcellus ENSCPOG00000014392 I 0.605
ENSCSAG00000014171 Chlorocebus sabaeus ENSCSAG00000014171 I 0.605
six4a Danio rerio ENSDARG00000004695 I 0.605
SIX4 Dasypus novemcinctus ENSDNOG00000044446 I 0.605
SIX4 Equus caballus ENSECAG00000023515 I 0.605
ENSFALG00000003446 Ficedula albicollis ENSFALG00000003446 I 0.605
SIX4 Homo sapiens ENSG00000100625 D 0.605
SIX4 Gallus gallus ENSGALG00000017389 I 0.605
ENSLACG00000018526 Latimeria chalumnae ENSLACG00000018526 I 0.605
SIX4 Loxodonta africana ENSLAFG00000021577 I 0.605
ENSLOCG00000010093 Lepisosteus oculatus ENSLOCG00000010093 I 0.605
ENSMEUG00000015192 Macropus eugenii ENSMEUG00000015192 I 0.605
SIX4 Meleagris gallopavo ENSMGAG00000013569 I 0.605
SIX4 Microcebus murinus ENSMICG00000003524 I 0.605
ENSMMUG00000001640 Macaca mulatta ENSMMUG00000001640 I 0.605
SIX4 Monodelphis domestica ENSMODG00000008646 I 0.605
Six4 Mus musculus ENSMUSG00000034460 D 0.605
ENSOARG00000021130 Ovis aries ENSOARG00000021130 I 0.605
SIX4 Otolemur garnettii ENSOGAG00000016082 I 0.605
ENSONIG00000020117 Oreochromis niloticus ENSONIG00000020117 I 0.605
SIX4 Ochotona princeps ENSOPRG00000011678 I 0.605
six4a Oryzias latipes ENSORLG00000015756 I 0.605
ENSPANG00000020970 Papio anubis ENSPANG00000020970 I 0.605
SIX4 Procavia capensis ENSPCAG00000014927 I 0.605
ENSPFOG00000004053 Poecilia formosa ENSPFOG00000004053 I 0.605
ENSPPYG00000005875 Pongo abelii ENSPPYG00000005875 I 0.605
SIX4 Pan troglodytes ENSPTRG00000006411 I 0.605
Six4 Rattus norvegicus ENSRNOG00000007250 I 0.605
ENSSHAG00000016030 Sarcophilus harrisii ENSSHAG00000016030 I 0.605
SIX4 Sus scrofa ENSSSCG00000005089 I 0.605
ENSSTOG00000029039 Ictidomys tridecemlineatus ENSSTOG00000029039 I 0.605
six4a Tetraodon nigroviridis ENSTNIG00000017344 I 0.605
six4a Takifugu rubripes ENSTRUG00000010704 I 0.605
ENSTSYG00000001908 Tarsius syrichta ENSTSYG00000001908 I 0.605
ENSXMAG00000013480 Xiphophorus maculatus ENSXMAG00000013480 I 0.605
SPU_017380 Strongylocentrotus purpuratus SPU_017380 I 0.605
Aan_R001649 Calypte anna Aan_R001649 I 0.605
Afo_R010343 Aptenodytes forsteri Afo_R010343 I 0.605
Cmyd_10008495 Chelonia mydas Cmyd_10008495 I 0.605
Myotis_brandtii_SIX4_10027187 Myotis brandtii Myotis_brandtii_SIX4_10027187 I 0.605
Ogr08726 Ophisaurus gracilis Ogr08726 I 0.605
Pvit_17416 Pogona vitticeps Pvit_17416 I 0.605
BGLB013708 Biomphalaria glabrata BGLB013708 I 0.605
SIX4 Choloepus hoffmanni ENSCHOG00000005951 I 0.604
ACYPI010082 Acyrthosiphon pisum ACYPI010082 I 0.601
ENSAMEG00000000785 Ailuropoda melanoleuca ENSAMEG00000000785 I 0.600
ENSAMXG00000015232 Astyanax mexicanus ENSAMXG00000015232 I 0.600
ENSAMXG00000019352 Astyanax mexicanus ENSAMXG00000019352 I 0.600
SIX5 Bos taurus ENSBTAG00000013346 I 0.600
SIX5 Canis familiaris ENSCAFG00000004394 I 0.600
six45 Ciona intestinalis ENSCING00000004748 I 0.600
SIX5 Callithrix jacchus ENSCJAG00000012372 I 0.600
SIX5 Cavia porcellus ENSCPOG00000014282 I 0.600
ENSCSAG00000003151 Chlorocebus sabaeus ENSCSAG00000003151 I 0.600
ENSCSAVG00000001518 Ciona savignyi ENSCSAVG00000001518 I 0.600
six4b Danio rerio ENSDARG00000031983 I 0.600
six5 Danio rerio ENSDARG00000068406 I 0.600
SIX5 Dasypus novemcinctus ENSDNOG00000035763 I 0.600
SIX5 Equus caballus ENSECAG00000015419 I 0.600
ENSEEUG00000006684 Erinaceus europaeus ENSEEUG00000006684 I 0.600
SIX5 Felis catus ENSFCAG00000030970 I 0.600
SIX5 Homo sapiens ENSG00000177045 D 0.600
six4a Gasterosteus aculeatus ENSGACG00000008440 I 0.600
SIX5 Gorilla gorilla ENSGGOG00000007958 I 0.600
ENSGMOG00000010829 Gadus morhua ENSGMOG00000010829 I 0.600
ENSLACG00000013126 Latimeria chalumnae ENSLACG00000013126 I 0.600
SIX5 Loxodonta africana ENSLAFG00000030935 I 0.600
ENSMICG00000001845 Microcebus murinus ENSMICG00000001845 I 0.600
SIX5 Myotis lucifugus ENSMLUG00000001318 I 0.600
ENSMMUG00000016455 Macaca mulatta ENSMMUG00000016455 I 0.600
ENSMPUG00000005715 Mustela putorius furo ENSMPUG00000005715 I 0.600
Six5 Mus musculus ENSMUSG00000040841 I 0.600
ENSOANG00000013518 Ornithorhynchus anatinus ENSOANG00000013518 I 0.600
SIX5 Otolemur garnettii ENSOGAG00000013460 I 0.600
ENSONIG00000003682 Oreochromis niloticus ENSONIG00000003682 I 0.600
six5 Oryzias latipes ENSORLG00000006762 I 0.600
ENSPANG00000005316 Papio anubis ENSPANG00000005316 I 0.600
SIX5 Procavia capensis ENSPCAG00000004939 I 0.600
ENSPFOG00000009796 Poecilia formosa ENSPFOG00000009796 I 0.600
ENSPPYG00000010131 Pongo abelii ENSPPYG00000010131 I 0.600
SIX5 Pan troglodytes ENSPTRG00000033681 I 0.600
SIX5 Pteropus vampyrus ENSPVAG00000001347 I 0.600
Six5 Rattus norvegicus ENSRNOG00000060146 I 0.600
ENSSTOG00000028295 Ictidomys tridecemlineatus ENSSTOG00000028295 I 0.600
SIX5 Tursiops truncatus ENSTTRG00000014303 I 0.600
ENSXMAG00000004315 Xiphophorus maculatus ENSXMAG00000004315 I 0.600
HelroG72129 Helobdella robusta HelroG72129 I 0.600
RPRC000264 Rhodnius prolixus RPRC000264 I 0.600
TC003852 Tribolium castaneum TC003852 I 0.600
ENSBTAP00000017753-D1 Bos grunniens ENSBTAP00000017753-D1 I 0.600
Pvit_16914 Pogona vitticeps Pvit_16914 I 0.600
LCUP015129 Lucilia cuprina LCUP015129 I 0.600
LDEC015106 Leptinotarsa decemlineata LDEC015106 I 0.600
LDEC016907 Leptinotarsa decemlineata LDEC016907 I 0.600
six4 Xenopus tropicalis XB-GENE-481699 I 0.600