CJA17634 (Caenorhabditis japonica)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 CJA17634 T205981_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Six4
M00563_2.00 		Drosophila melanogaster
NNDANMHNN
NNDKNTHNN		 PBM
Busser et al.(2012a)
Six4 		0.652 0.635
Six4
M06530_2.00 		Drosophila melanogaster
TGABAC
GTVTCA		 B1H
Mathelier et al.(2014)
MA0204.1 		0.652 0.635
Six4
M06334_2.00 		Drosophila melanogaster
WDDTGABAC
GTVTCAHHW		 B1H
Zhu et al.(2011)
Six4_Cell_FBgn0027364 		0.652 0.635
Six4
M06335_2.00 		Drosophila melanogaster
NTGAKACB
VGTMTCAN		 B1H
Zhu et al.(2011)
Six4_SOLEXA_2_FBgn0027364 		0.652 0.635
Six4
M06336_2.00 		Drosophila melanogaster
NNNTGABA
TVTCANNN		 B1H
Zhu et al.(2011)
Six4_SOLEXA_FBgn0027364 		0.652 0.635
Six4
M00461_2.00 		Mus musculus
NNKABMHNN
NNDKVTMNN		 PBM
Berger et al.(2008)
Six4_2860 		0.649 0.635
SIX4
M04939_2.00 		Homo sapiens
NVYGATACVB
VBGTATCRBN		 SELEX
Yin et al.(2017)
SIX4_eDBD_HT-SELEX 		0.649 0.635
Six4
M09198_2.00 		Mus musculus
DGDAABHNSASNNN
NNNSTSNDVTTHCH		 Misc
Kulakovskiy et al.(2013)
SIX4_MOUSE.H11MO.0.C 		0.649 0.635
SIX4
M10646_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX4_Q3 		0.649 0.635
SIX4
M04940_2.00 		Homo sapiens
NBGTAWCRHN
NDYGWTACVN		 SELEX
Yin et al.(2017)
SIX4_eDBD_Methyl-HT-SELEX 		0.649 0.635
SIX5
M08208_2.00 		Homo sapiens
GARWTGTAGT
ACTACAWYTC		 ChIP-seq
Contrino et al.(2012)
Mv121 		0.648 0.558
SIX5
M08209_2.00 		Homo sapiens
GGAGTTGT
ACAACTCC		 ChIP-seq
Contrino et al.(2012)
Mv123 		0.648 0.558
SIX5
M10738_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX5_01 		0.648 0.558
SIX5
M10739_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX5_02 		0.648 0.558
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CJA17634 Homeodomain 130 182

Links

Other Homeodomain family TFs
Other Caenorhabditis japonica TFs

222 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PXEA_0002133501 Protopolystoma xenopodis PXEA_0002133501 I 0.814
TCLT_0000291601 Thelazia callipaeda TCLT_0000291601 I 0.780
PEQ_0000660801 Parascaris equorum PEQ_0000660801 I 0.732
EEL_0000988301 Elaeophora elaphi EEL_0000988301 N 0.726
TCLT_0000938801 Thelazia callipaeda TCLT_0000938801 N 0.726
ANCCEY_01677 Ancylostoma ceylanicum ANCCEY_01677 N 0.716
ANCDUO_23484 Ancylostoma duodenale ANCDUO_23484 N 0.716
nLs.2.1.2.g03086 Litomosoides sigmodontis nLs.2.1.2.g03086 I 0.715
YQE_03710 Dendroctonus ponderosae YQE_03710 I 0.714
Bm522 Brugia malayi Bm522 N 0.707
WBGene00242653 Onchocerca volvulus WBGene00242653 N 0.707
BTMF_0000534901 Brugia timori BTMF_0000534901 N 0.704
snap_masked-nMf.1.1.scaf01656-processed-gene-0.6 Meloidogyne floridensis snap_masked-nMf.1.1.scaf01656-processed-gene-0.6 N 0.689
TCNE_0000507501 Toxocara canis TCNE_0000507501 N 0.687
HelroG92182 Helobdella robusta HelroG92182 N 0.686
ENSMMUP00000024349 Macaca fascicularis ENSMMUP00000024349 N 0.681
PEQ_0000211101 Parascaris equorum PEQ_0000211101 N 0.666
tetur06g00560 Tetranychus urticae tetur06g00560 I 0.664
six5 Danio rerio ENSDARG00000068406 I 0.661
ENSONIG00000003682 Oreochromis niloticus ENSONIG00000003682 I 0.661
six5 Oryzias latipes ENSORLG00000006762 I 0.661
ENSPFOG00000009796 Poecilia formosa ENSPFOG00000009796 I 0.661
six5 Tetraodon nigroviridis ENSTNIG00000007742 I 0.661
six5 Takifugu rubripes ENSTRUG00000011163 I 0.661
ENSXMAG00000004315 Xiphophorus maculatus ENSXMAG00000004315 I 0.661
SPU_017380 Strongylocentrotus purpuratus SPU_017380 I 0.661
six4 Xenopus tropicalis XB-GENE-481699 I 0.661
Pvit_17416 Pogona vitticeps Pvit_17416 I 0.660
PEQ_0000072101 Parascaris equorum PEQ_0000072101 N 0.660
CJA00270 Caenorhabditis japonica CJA00270 I 0.659
ENSTTRG00000001084 Tursiops truncatus ENSTTRG00000001084 I 0.656
SVUK_0002108701 Strongylus vulgaris SVUK_0002108701 N 0.655
six5 Gasterosteus aculeatus ENSGACG00000009721 I 0.654
Six4 Drosophila melanogaster FBgn0027364 D 0.652
GA17741 Drosophila pseudoobscura FBgn0077751 I 0.652
GF24111 Drosophila ananassae FBgn0101105 I 0.652
GG13283 Drosophila erecta FBgn0105555 I 0.652
GH14784 Drosophila grimshawi FBgn0122260 I 0.652
GI11887 Drosophila mojavensis FBgn0134645 I 0.652
GM22186 Drosophila sechellia FBgn0177057 I 0.652
GD12161 Drosophila simulans FBgn0183898 I 0.652
GJ13766 Drosophila virilis FBgn0200986 I 0.652
GK12359 Drosophila willistoni FBgn0214369 I 0.652
GE22381 Drosophila yakuba FBgn0239604 I 0.652
GE22732 Drosophila yakuba FBgn0239938 I 0.652
LCUP015129 Lucilia cuprina LCUP015129 I 0.652
MDOA003378 Musca domestica MDOA003378 I 0.652
CapteG227938 Capitella teleta CapteG227938 I 0.649
CGI_10022945 Crassostrea gigas CGI_10022945 I 0.649
ENSAMEG00000002968 Ailuropoda melanoleuca ENSAMEG00000002968 I 0.649
ENSAMXG00000019352 Astyanax mexicanus ENSAMXG00000019352 I 0.649
ENSAPLG00000008107 Anas platyrhynchos ENSAPLG00000008107 I 0.649
SIX4 Canis familiaris ENSCAFG00000015627 I 0.649
SIX4 Callithrix jacchus ENSCJAG00000019133 I 0.649
ENSCPOG00000014392 Cavia porcellus ENSCPOG00000014392 I 0.649
ENSCSAG00000014171 Chlorocebus sabaeus ENSCSAG00000014171 I 0.649
six4a Danio rerio ENSDARG00000004695 I 0.649
six4b Danio rerio ENSDARG00000031983 I 0.649
SIX4 Dasypus novemcinctus ENSDNOG00000044446 I 0.649
SIX4 Equus caballus ENSECAG00000023515 I 0.649
ENSFALG00000003446 Ficedula albicollis ENSFALG00000003446 I 0.649
SIX4 Homo sapiens ENSG00000100625 D 0.649
SIX4 Gallus gallus ENSGALG00000017389 I 0.649
ENSGMOG00000010829 Gadus morhua ENSGMOG00000010829 I 0.649
ENSLACG00000013126 Latimeria chalumnae ENSLACG00000013126 I 0.649
ENSLACG00000018526 Latimeria chalumnae ENSLACG00000018526 I 0.649
SIX4 Loxodonta africana ENSLAFG00000021577 I 0.649
ENSLOCG00000010093 Lepisosteus oculatus ENSLOCG00000010093 I 0.649
ENSMEUG00000015192 Macropus eugenii ENSMEUG00000015192 I 0.649
SIX4 Meleagris gallopavo ENSMGAG00000013569 I 0.649
SIX4 Microcebus murinus ENSMICG00000003524 I 0.649
ENSMMUG00000001640 Macaca mulatta ENSMMUG00000001640 I 0.649
SIX4 Monodelphis domestica ENSMODG00000008646 I 0.649
Six4 Mus musculus ENSMUSG00000034460 D 0.649
ENSOARG00000021130 Ovis aries ENSOARG00000021130 I 0.649
SIX4 Otolemur garnettii ENSOGAG00000016082 I 0.649
SIX4 Ochotona princeps ENSOPRG00000011678 I 0.649
ENSPANG00000020970 Papio anubis ENSPANG00000020970 I 0.649
SIX4 Procavia capensis ENSPCAG00000014927 I 0.649
ENSPPYG00000005875 Pongo abelii ENSPPYG00000005875 I 0.649
SIX4 Pan troglodytes ENSPTRG00000006411 I 0.649
Six4 Rattus norvegicus ENSRNOG00000007250 I 0.649
ENSSHAG00000016030 Sarcophilus harrisii ENSSHAG00000016030 I 0.649
SIX4 Sus scrofa ENSSSCG00000005089 I 0.649
ENSSTOG00000029039 Ictidomys tridecemlineatus ENSSTOG00000029039 I 0.649
ENSTSYG00000001908 Tarsius syrichta ENSTSYG00000001908 I 0.649
ISCW023235 Ixodes scapularis ISCW023235 I 0.649
LotgiG115798 Lottia gigantea LotgiG115798 I 0.649
NV11991 Nasonia vitripennis NV11991 I 0.649
Aan_R001649 Calypte anna Aan_R001649 I 0.649
Afo_R010343 Aptenodytes forsteri Afo_R010343 I 0.649
Cmyd_10008495 Chelonia mydas Cmyd_10008495 I 0.649
Myotis_brandtii_SIX4_10027187 Myotis brandtii Myotis_brandtii_SIX4_10027187 I 0.649
Ogr08726 Ophisaurus gracilis Ogr08726 I 0.649
Ocbimv22032757m.g Octopus bimaculoides Ocbimv22032757m.g I 0.649
SMU15013596 Schmidtea mediterranea SMU15013596 I 0.649
CpipJ_CPIJ007957 Culex pipiens CpipJ_CPIJ007957 I 0.648
AAEL010327 Aedes aegypti AAEL010327 I 0.648
ACEP26590 Atta cephalotes ACEP26590 I 0.648
ACYPI010082 Acyrthosiphon pisum ACYPI010082 I 0.648
ADAC000140 Anopheles darlingi ADAC000140 I 0.648
AGAP011065 Anopheles gambiae AGAP011065 I 0.648
AGAP011067 Anopheles gambiae AGAP011067 I 0.648
BGIBMGA000091 Bombyx mori BGIBMGA000091 I 0.648
CPIJ007957 Culex quinquefasciatus CPIJ007957 I 0.648
ENSAMEG00000000785 Ailuropoda melanoleuca ENSAMEG00000000785 I 0.648
ENSAMXG00000015232 Astyanax mexicanus ENSAMXG00000015232 I 0.648
SIX5 Bos taurus ENSBTAG00000013346 I 0.648
SIX5 Canis familiaris ENSCAFG00000004394 I 0.648
SIX5 Callithrix jacchus ENSCJAG00000012372 I 0.648
SIX5 Cavia porcellus ENSCPOG00000014282 I 0.648
ENSCSAG00000003151 Chlorocebus sabaeus ENSCSAG00000003151 I 0.648
SIX5 Dasypus novemcinctus ENSDNOG00000035763 I 0.648
SIX5 Equus caballus ENSECAG00000015419 I 0.648
ENSEEUG00000006684 Erinaceus europaeus ENSEEUG00000006684 I 0.648
SIX5 Felis catus ENSFCAG00000030970 I 0.648
SIX5 Homo sapiens ENSG00000177045 D 0.648
six4a Gasterosteus aculeatus ENSGACG00000008440 I 0.648
SIX5 Gorilla gorilla ENSGGOG00000007958 I 0.648
SIX5 Loxodonta africana ENSLAFG00000030935 I 0.648
ENSMICG00000001845 Microcebus murinus ENSMICG00000001845 I 0.648
SIX5 Myotis lucifugus ENSMLUG00000001318 I 0.648
ENSMMUG00000016455 Macaca mulatta ENSMMUG00000016455 I 0.648
ENSMPUG00000005715 Mustela putorius furo ENSMPUG00000005715 I 0.648
Six5 Mus musculus ENSMUSG00000040841 I 0.648
ENSOANG00000013518 Ornithorhynchus anatinus ENSOANG00000013518 I 0.648
SIX5 Otolemur garnettii ENSOGAG00000013460 I 0.648
ENSONIG00000020117 Oreochromis niloticus ENSONIG00000020117 I 0.648
six4a Oryzias latipes ENSORLG00000015756 I 0.648
ENSPANG00000005316 Papio anubis ENSPANG00000005316 I 0.648
SIX5 Procavia capensis ENSPCAG00000004939 I 0.648
ENSPFOG00000004053 Poecilia formosa ENSPFOG00000004053 I 0.648
ENSPPYG00000010131 Pongo abelii ENSPPYG00000010131 I 0.648
SIX5 Pan troglodytes ENSPTRG00000033681 I 0.648
SIX5 Pteropus vampyrus ENSPVAG00000001347 I 0.648
Six5 Rattus norvegicus ENSRNOG00000060146 I 0.648
ENSSTOG00000028295 Ictidomys tridecemlineatus ENSSTOG00000028295 I 0.648
six4a Tetraodon nigroviridis ENSTNIG00000017344 I 0.648
six4a Takifugu rubripes ENSTRUG00000010704 I 0.648
SIX5 Tursiops truncatus ENSTTRG00000014303 I 0.648
ENSXMAG00000013480 Xiphophorus maculatus ENSXMAG00000013480 I 0.648
KGM_20665 Danaus plexippus KGM_20665 I 0.648
MCINX003783 Melitaea cinxia MCINX003783 I 0.648
RPRC000264 Rhodnius prolixus RPRC000264 I 0.648
SINV15566 Solenopsis invicta SINV15566 I 0.648
TC003852 Tribolium castaneum TC003852 I 0.648
Cflo_08297--XP_001120698.1_APIME Camponotus floridanus Cflo_08297--XP_001120698.1_APIME I 0.648
ENSBTAP00000017753-D1 Bos grunniens ENSBTAP00000017753-D1 I 0.648
Hsal_06384--XP_001120698.1_APIME Harpegnathos saltator Hsal_06384--XP_001120698.1_APIME I 0.648
LDEC015106 Leptinotarsa decemlineata LDEC015106 I 0.648
LDEC016907 Leptinotarsa decemlineata LDEC016907 I 0.648
AALB010817 Anopheles albimanus AALB010817 I 0.648
AARA005499 Anopheles arabiensis AARA005499 I 0.648
AATE008460 Anopheles atroparvus AATE008460 I 0.648
ACOM023033 Anopheles coluzzii ACOM023033 I 0.648
ACUA023926 Anopheles culicifacies ACUA023926 I 0.648
ADIR002306 Anopheles dirus ADIR002306 I 0.648
AEPI002096 Anopheles epiroticus AEPI002096 I 0.648
AFAF011509 Anopheles farauti AFAF011509 I 0.648
AFUN004151 Anopheles funestus AFUN004151 I 0.648
AMEC008377 Anopheles melas AMEC008377 I 0.648
AMEM005184 Anopheles merus AMEM005184 I 0.648
AMIN008523 Anopheles minimus AMIN008523 I 0.648
AQUA001156 Anopheles quadriannulatus AQUA001156 I 0.648
ASIS016521 Anopheles sinensis ASIS016521 I 0.648
ASTEI05569 Anopheles stephensi ASTEI05569 I 0.648
ENSGMOG00000008067 Gadus morhua ENSGMOG00000008067 I 0.646
six45 Ciona intestinalis ENSCING00000004748 I 0.644
ENSCSAVG00000001518 Ciona savignyi ENSCSAVG00000001518 I 0.644
Pvit_16914 Pogona vitticeps Pvit_16914 I 0.644
BGLB013708 Biomphalaria glabrata BGLB013708 I 0.644
GL12751 Drosophila persimilis FBgn0150357 I 0.642
SPAL_0000663500 Strongyloides papillosus SPAL_0000663500 I 0.642
SSTP_0000577700 Strongyloides stercoralis SSTP_0000577700 I 0.642
SVE_0935100 Strongyloides venezuelensis SVE_0935100 I 0.642
PTRK_0000425200 Parastrongyloides trichosuri PTRK_0000425200 I 0.641
ANCCAN_20712 Ancylostoma caninum ANCCAN_20712 I 0.640
ANCDUO_14963 Ancylostoma duodenale ANCDUO_14963 I 0.640
CGOC_0001175101 Cylicostephanus goldi CGOC_0001175101 I 0.640
HPBE_0001084301 Heligmosomoides bakeri HPBE_0001084301 I 0.640
HPLM_0001489701 Haemonchus placei HPLM_0001489701 I 0.640
NBR_0000072001 Nippostrongylus brasiliensis NBR_0000072001 I 0.640
SVUK_0000475301 Strongylus vulgaris SVUK_0000475301 I 0.640
HelroG72129 Helobdella robusta HelroG72129 I 0.639
ENSLOCG00000014840 Lepisosteus oculatus ENSLOCG00000014840 I 0.638
CBG06764 Caenorhabditis briggsae CBG06764 I 0.637
CBN13130 Caenorhabditis brenneri CBN13130 I 0.637
ceh-33 Caenorhabditis elegans WBGene00000454 I 0.637
SMAR005228 Strigamia maritima SMAR005228 I 0.636
HDID_0000865801 Hymenolepis diminuta HDID_0000865801 I 0.635
HmN_000307400 Hymenolepis microstoma HmN_000307400 I 0.635
EmuJ_000130200 Echinococcus multilocularis EmuJ_000130200 I 0.633
CBG04628 Caenorhabditis briggsae CBG04628 I 0.629
CBN23950 Caenorhabditis brenneri CBN23950 I 0.629
unc-39 Caenorhabditis elegans WBGene00006775 I 0.629
ALUE_0000011401 Ascaris lumbricoides ALUE_0000011401 I 0.626
ALUE_0001616301 Ascaris lumbricoides ALUE_0001616301 I 0.626
ASU_04955 Ascaris suum ASU_04955 I 0.626
DME_0000792901 Dracunculus medinensis DME_0000792901 I 0.626
L798_10542 Zootermopsis nevadensis L798_10542 I 0.624
L898_g28442 Steinernema monticolum L898_g28442 I 0.623
BXY_0223800 Bursaphelenchus xylophilus BXY_0223800 I 0.620
SNAPOd2T00005340001 Oikopleura dioica SNAPOd2T00005340001 N 0.618
six9 Oryzias latipes ENSORLG00000006757 I 0.617
SIX4 Choloepus hoffmanni ENSCHOG00000005951 I 0.615
HelroG143898 Helobdella robusta HelroG143898 I 0.615
A_05252 Schistosoma haematobium A_05252 I 0.615
SCUD_0000585201 Schistosoma curassoni SCUD_0000585201 I 0.615
SMRZ_0001033601 Schistosoma margrebowiei SMRZ_0001033601 I 0.615
SMTD_0001710001 Schistosoma mattheei SMTD_0001710001 I 0.615
Smp_039470 Schistosoma mansoni Smp_039470 I 0.613
A_06874 Schistosoma haematobium A_06874 I 0.613
csin101618 Clonorchis sinensis csin101618 I 0.613
SMRZ_0000838301 Schistosoma margrebowiei SMRZ_0000838301 I 0.613
T265_04509 Opisthorchis viverrini T265_04509 I 0.613
PHUM363270 Pediculus humanus PHUM363270 I 0.610
nRc.2.0.1.g08154 Romanomermis culicivorax nRc.2.0.1.g08154 I 0.610
SBAD_0000431501 Soboliphyme baturini SBAD_0000431501 I 0.610
MhA1_Contig1753.frz3.fgene1 Meloidogyne hapla MhA1_Contig1753.frz3.fgene1 I 0.606
TRE_0000254801 Trichobilharzia regenti TRE_0000254801 I 0.605
TRE_0000553301 Trichobilharzia regenti TRE_0000553301 I 0.601
GB55286 Apis mellifera GB55286 I 0.600