Traes_4BL_011308A76 (Triticum aestivum)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF06217 (GAGA_bind) IPR010409 Traes_4BL_011308A76 T024759_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BPC1
M06715_2.00 		Arabidopsis thaliana
GAGAGAGAGAGAGAGAGAGAGAGA
TCTCTCTCTCTCTCTCTCTCTCTC		 Dap-seq
OMalley et al.(2016)
BPC1_col_a 		0.798 0.798
BPC1
M06716_2.00 		Arabidopsis thaliana
RAGAGAGAGARAGAR
YTCTYTCTCTCTCTY		 Dap-seq
OMalley et al.(2016)
BPC1_colamp_a 		0.798 0.798
BPC1
M09775_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BPC1_Q2 		0.798 0.798
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_4BL_011308A76.1 BBR 1 99

Links

Other BBR family TFs
Other Triticum aestivum TFs

87 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA005358 Oryza indica BGIOSGA005358 I
BRADI3G55430 Brachypodium distachyon BRADI3G55430 N
F775_13778 Aegilops tauschii F775_13778 N
MLOC_53202 Hordeum vulgare MLOC_53202 N
OBART02G37370 Oryza barthii OBART02G37370 I
OGLUM02G38510 Oryza glumaepatula OGLUM02G38510 I
OLONG_013725 Oryza longistaminata OLONG_013725 I
OMERI01G33350 Oryza meridionalis OMERI01G33350 I
ONIVA02G40130 Oryza nivara ONIVA02G40130 I
OPUNC02G34540 Oryza punctata OPUNC02G34540 I
ORGLA02G0325900 Oryza glaberrima ORGLA02G0325900 I
ORUFI02G38880 Oryza rufipogon ORUFI02G38880 I
Pavir.Gb01315 Panicum virgatum Pavir.Gb01315 I
Pavir.J14051 Panicum virgatum Pavir.J14051 I
Si009551m.g Setaria italica Si009551m.g I
Traes_6AL_E94233A40 Triticum aestivum Traes_6AL_E94233A40 N
TRIUR3_01942 Triticum urartu TRIUR3_01942 N