CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.H00573
(
Eucalyptus grandis
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF06217 (GAGA_bind)
IPR010409
Eucgr.H00573
T024847_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.H00573.1
BBR
1
285
MDGDNSLNMRNWGYYEPTATMRGLGLNLMSSVPEKPLFDSRSAAVMAASNGSAYHHRDLGASQAVYPMDYMRDAWMSPREKFFNPMSGNHNYSMIPETSTAHHMQMVQPPDLSKDERATQVEQVGIGNEIIENGPSKKRPGPKGPKSPKPKKAKRGPRAPKAETAPSVPRARTIKKTTELMINGINMDISCIPIPVCSCTGTPQQCYRWGSGGWQSACCTTGLSMYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFTNPIDLRTHWAKHGTNKFVTIR
Links
Other
BBR
family TFs
Other
Eucalyptus grandis
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000013478
Ailuropoda melanoleuca
ENSAMEG00000013478
I
ENSBTAP00000019345-D1
Bos grunniens
ENSBTAP00000019345-D1
I
ENSCSAG00000015065
Chlorocebus sabaeus
ENSCSAG00000015065
I
ENSDNOG00000024891
Dasypus novemcinctus
ENSDNOG00000024891
I
ENSETEG00000016371
Echinops telfairi
ENSETEG00000016371
I
ENSGMOG00000017815
Gadus morhua
ENSGMOG00000017815
I
ENSMICG00000011160
Microcebus murinus
ENSMICG00000011160
I
ENSMLUG00000015053
Myotis lucifugus
ENSMLUG00000015053
I
ENSMMUG00000019719
Macaca mulatta
ENSMMUG00000019719
I
ENSMPUG00000017558
Mustela putorius furo
ENSMPUG00000017558
I
ENSNLEG00000006985
Nomascus leucogenys
ENSNLEG00000006985
I
ENSOARG00000013174
Ovis aries
ENSOARG00000013174
I
ENSONIG00000020305
Oreochromis niloticus
ENSONIG00000020305
I
ENSPANG00000007536
Papio anubis
ENSPANG00000007536
I
ENSPFOG00000015709
Poecilia formosa
ENSPFOG00000015709
I
ENSSTOG00000005866
Ictidomys tridecemlineatus
ENSSTOG00000005866
I
ENSTNIG00000004434
Tetraodon nigroviridis
ENSTNIG00000004434
I
ENSXMAG00000009637
Xiphophorus maculatus
ENSXMAG00000009637
I
GB53867
Apis mellifera
GB53867
I
GM16048
Drosophila sechellia
FBgn0170964
I
Myotis_brandtii_SNAI1_10026057
Myotis brandtii
Myotis_brandtii_SNAI1_10026057
I
Myotis_brandtii_SNAI1_10026379
Myotis brandtii
Myotis_brandtii_SNAI1_10026379
I
SNAI1
Bos taurus
ENSBTAG00000014554
I
SNAI1
Tupaia belangeri
ENSTBEG00000012262
I
SNAI1
Tursiops truncatus
ENSTTRG00000002029
I
Snai1
Rattus norvegicus
ENSRNOG00000009594
I
SNAI1
Pteropus vampyrus
ENSPVAG00000004119
I
SNAI1
Pan troglodytes
ENSPTRG00000013614
I
SNAI1
Otolemur garnettii
ENSOGAG00000030111
I
SNAI1
Oryctolagus cuniculus
ENSOCUG00000005422
I
Snai1
Mus musculus
ENSMUSG00000042821
D
SNAI1
Loxodonta africana
ENSLAFG00000030265
I
SNAI1
Gorilla gorilla
ENSGGOG00000024422
I
SNAI1
Canis familiaris
ENSCAFG00000011499
I
SNAI1
Callithrix jacchus
ENSCJAG00000000518
I
SNAI1
Cavia porcellus
ENSCPOG00000026663
I
SNAI1
Procavia capensis
ENSPCAG00000011934
I
SNAI1
Homo sapiens
ENSG00000124216
D
SNAI1
Felis catus
ENSFCAG00000010558
I
SNAI1
Equus caballus
ENSECAG00000009787
I
snai1a
Takifugu rubripes
ENSTRUG00000012293
I
snai1a
Danio rerio
ENSDARG00000056995
I
snai1a
Tetraodon nigroviridis
ENSTNIG00000007311
I
snai1a
Gasterosteus aculeatus
ENSGACG00000010147
I
snai3
Takifugu rubripes
ENSTRUG00000002385
I
snai3
Xenopus tropicalis
XB-GENE-488030
I