CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bo3g028090
(
Brassica oleracea
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
Bo3g028090
T031120_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo3g028090.1
bHLH
156
210
GAKKPKLSSQSMAARERRRRIAEKTHELTKLIPGGQKLNTAEMFQAAAKYVKFLQ
Links
Other
bHLH
family TFs
Other
Brassica oleracea
TFs
61 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Al_scaffold_0004_1965
Arabidopsis lyrata
Al_scaffold_0004_1965
N
0.914
BHLH52
Arabidopsis thaliana
AT1G30670
N
0.901
BHLH53
Arabidopsis thaliana
AT2G34820
N
0.914
Bo4g039270
Brassica oleracea
Bo4g039270
N
0.914
Bo4g182930
Brassica oleracea
Bo4g182930
N
0.894
Bostr.23794s0621
Boechera stricta
Bostr.23794s0621
N
0.914
Bra005389
Brassica rapa
Bra005389
N
0.914
Bra021933
Brassica rapa
Bra021933
N
0.894
Bra022993
Brassica rapa
Bra022993
N
0.912
Cagra.1508s0136
Capsella grandiflora
Cagra.1508s0136
N
0.901
Carubv10011063m.g
Capsella rubella
Carubv10011063m.g
N
0.901
Ciclev10017579m.g
Citrus clementina
Ciclev10017579m.g
N
0.877
fgenesh1_pm.C_scaffold_1002485
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1002485
N
0.901
GSMUA_Achr11G16900_001
Musa acuminata
GSMUA_Achr11G16900_001
N
0.866
GSMUA_AchrUn_randomG20690_001
Musa acuminata
GSMUA_AchrUn_randomG20690_001
N
0.866
Lus10038432.g
Linum usitatissimum
Lus10038432.g
N
0.881
MDP0000216053
Malus domestica
MDP0000216053
N
orange1.1g041370m.g
Citrus sinensis
orange1.1g041370m.g
N
0.877
Pm010610
Prunus mume
Pm010610
N
0.890
PRUPE_ppa017597mg
Prunus persica
PRUPE_ppa017597mg
N
0.890
PRUPE_ppa025945mg
Prunus persica
PRUPE_ppa025945mg
N
TCM_027032
Theobroma cacao
TCM_027032
N
Thhalv10017751m.g
Eutrema salsugineum
Thhalv10017751m.g
N
0.914