CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI3G53060
(
Brachypodium distachyon
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
BRADI3G53060
T031683_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI3G53060.1
bHLH
191
236
QSLAAKNRREKISERLRTLQEMVPNGTKVDMVTMLEKAISYVKFLQ
Links
Other
bHLH
family TFs
Other
Brachypodium distachyon
TFs
110 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
28609.m000209
Ricinus communis
28609.m000209
N
0.879
AC216731.3_FG001
Zea mays
AC216731.3_FG001
N
0.879
AMTR_s00024p00250370
Amborella trichopoda
AMTR_s00024p00250370
N
0.879
Aquca_041_00164
Aquilegia coerulea
Aquca_041_00164
N
0.879
BGIOSGA002533
Oryza indica
BGIOSGA002533
N
0.879
BGIOSGA008903
Oryza indica
BGIOSGA008903
N
0.879
BHLH83
Arabidopsis thaliana
AT1G66470
N
0.879
BHLH86
Arabidopsis thaliana
AT5G37800
N
0.879
Bo00835s050
Brassica oleracea
Bo00835s050
N
0.879
Bo6g101000
Brassica oleracea
Bo6g101000
N
0.879
Bostr.26959s0271
Boechera stricta
Bostr.26959s0271
N
0.879
Bostr.9638s0100
Boechera stricta
Bostr.9638s0100
N
0.879
Bra019708
Brassica rapa
Bra019708
N
0.879
BRADI1G42440
Brachypodium distachyon
BRADI1G42440
N
0.847
BRADI2G01000
Brachypodium distachyon
BRADI2G01000
N
0.879
Cagra.2629s0001
Capsella grandiflora
Cagra.2629s0001
N
0.879
Cagra.8123s0001
Capsella grandiflora
Cagra.8123s0001
N
0.914
Carubv10007389m.g
Capsella rubella
Carubv10007389m.g
N
0.879
Carubv10021322m.g
Capsella rubella
Carubv10021322m.g
N
0.879
cassava10199.m1
Manihot esculenta
cassava10199.m1
N
0.879
Ca_16136
Cicer arietinum
Ca_16136
N
0.879
Ciclev10013420m.g
Citrus clementina
Ciclev10013420m.g
N
0.879
Cla020067
Citrullus lanatus
Cla020067
N
0.879
Cucsa.006340
Cucumis sativus
Cucsa.006340
N
0.879
estExt_fgenesh1_pg.C_1470079
Physcomitrella patens
estExt_fgenesh1_pg.C_1470079
N
0.853
estExt_fgenesh1_pg.C_840011
Physcomitrella patens
estExt_fgenesh1_pg.C_840011
N
0.853
Eucgr.F02831
Eucalyptus grandis
Eucgr.F02831
N
0.879
evm.TU.contig_27490
Carica papaya
evm.TU.contig_27490
N
0.879
F775_02947
Aegilops tauschii
F775_02947
N
0.847
F775_03185
Aegilops tauschii
F775_03185
N
0.883
F775_23458
Aegilops tauschii
F775_23458
N
0.879
F775_25020
Aegilops tauschii
F775_25020
N
0.903
F775_43492
Aegilops tauschii
F775_43492
N
0.903
gene17937-v1.0-hybrid
Fragaria vesca
gene17937-v1.0-hybrid
N
0.879
GLYMA02G41370
Glycine max
GLYMA02G41370
N
0.879
GLYMA11G33840
Glycine max
GLYMA11G33840
N
0.879
GLYMA14G07590
Glycine max
GLYMA14G07590
N
0.879
GLYMA18G04420
Glycine max
GLYMA18G04420
N
0.879
Gorai.001G086800
Gossypium raimondii
Gorai.001G086800
N
0.879
Gorai.004G064400
Gossypium raimondii
Gorai.004G064400
N
0.879
GRMZM2G066057
Zea mays
GRMZM2G066057
N
0.911
GSMUA_Achr10G20230_001
Musa acuminata
GSMUA_Achr10G20230_001
N
0.879
GSMUA_Achr2G22860_001
Musa acuminata
GSMUA_Achr2G22860_001
N
0.879
GSMUA_Achr3G01250_001
Musa acuminata
GSMUA_Achr3G01250_001
N
0.849
GSMUA_Achr6G09370_001
Musa acuminata
GSMUA_Achr6G09370_001
N
0.879
LPERR01G00690
Leersia perrieri
LPERR01G00690
N
0.879
LPERR02G24230
Leersia perrieri
LPERR02G24230
N
0.879
Lus10017634.g
Linum usitatissimum
Lus10017634.g
N
0.879
Lus10033592.g
Linum usitatissimum
Lus10033592.g
N
0.879
MDP0000435722
Malus domestica
MDP0000435722
N
0.879
mgf025678m
Mimulus guttatus
mgf025678m
N
0.879
MLOC_37511
Hordeum vulgare
MLOC_37511
N
0.847
MTR_5g079500
Medicago truncatula
MTR_5g079500
N
0.879
OB01G10850
Oryza brachyantha
OB01G10850
N
0.879
OB02G36990
Oryza brachyantha
OB02G36990
N
0.879
OBART01G00850
Oryza barthii
OBART01G00850
N
0.879
OBART02G29800
Oryza barthii
OBART02G29800
N
0.879
OGLUM01G00830
Oryza glumaepatula
OGLUM01G00830
N
0.879
OGLUM02G30450
Oryza glumaepatula
OGLUM02G30450
N
0.879
OLONG_010619
Oryza longistaminata
OLONG_010619
N
0.879
OMERI01G00290
Oryza meridionalis
OMERI01G00290
N
0.879
OMERI02G28660
Oryza meridionalis
OMERI02G28660
N
0.879
ONIVA01G00780
Oryza nivara
ONIVA01G00780
N
0.879
ONIVA02G32560
Oryza nivara
ONIVA02G32560
N
0.879
OPUNC01G00700
Oryza punctata
OPUNC01G00700
N
0.879
OPUNC02G27370
Oryza punctata
OPUNC02G27370
N
0.879
orange1.1g038918m.g
Citrus sinensis
orange1.1g038918m.g
N
0.879
ORGLA01G0007400
Oryza glaberrima
ORGLA01G0007400
N
0.879
ORGLA02G0253300
Oryza glaberrima
ORGLA02G0253300
N
0.879
ORUFI01G00830
Oryza rufipogon
ORUFI01G00830
N
0.879
ORUFI02G31420
Oryza rufipogon
ORUFI02G31420
N
0.879
OS01G0111500
Oryza sativa
OS01G0111500
N
0.879
OS02G0710300
Oryza sativa
OS02G0710300
N
0.879
Pavir.Aa00611
Panicum virgatum
Pavir.Aa00611
N
0.879
Pavir.Db01008
Panicum virgatum
Pavir.Db01008
N
0.847
Pavir.Eb00817
Panicum virgatum
Pavir.Eb00817
N
0.876
Pavir.J04215
Panicum virgatum
Pavir.J04215
N
0.879
Pavir.J20533
Panicum virgatum
Pavir.J20533
N
0.879
PGSC0003DMG400030650
Solanum tuberosum
PGSC0003DMG400030650
N
0.879
Pm014359
Prunus mume
Pm014359
N
0.879
POPTR_0004s08770
Populus trichocarpa
POPTR_0004s08770
N
0.879
POPTR_0005s14360
Populus trichocarpa
POPTR_0005s14360
N
0.879
PRUPE_ppa025775mg
Prunus persica
PRUPE_ppa025775mg
N
0.879
RHD6
Arabidopsis lyrata
scaffold_201372.1
N
0.879
RSL1
Arabidopsis lyrata
fgenesh2_kg.7__3192__AT5G37800.1
N
0.879
SapurV1A.0102s0280
Salix purpurea
SapurV1A.0102s0280
N
0.879
SapurV1A.0230s0340
Salix purpurea
SapurV1A.0230s0340
N
0.879
Sb03g008290
Sorghum bicolor
Sb03g008290
N
0.911
Sb04g030230
Sorghum bicolor
Sb04g030230
N
0.879
SELMODRAFT_409967
Selaginella moellendorffii
SELMODRAFT_409967
N
0.856
SELMODRAFT_413232
Selaginella moellendorffii
SELMODRAFT_413232
N
0.859
SELMODRAFT_414414
Selaginella moellendorffii
SELMODRAFT_414414
N
0.856
SELMODRAFT_426794
Selaginella moellendorffii
SELMODRAFT_426794
N
0.859
Si004720m.g
Setaria italica
Si004720m.g
N
0.876
Si019575m.g
Setaria italica
Si019575m.g
N
0.879
Solyc02g091440.1
Solanum lycopersicum
Solyc02g091440.1
N
0.879
TCM_019210
Theobroma cacao
TCM_019210
N
0.879
Thhalv10018927m.g
Eutrema salsugineum
Thhalv10018927m.g
N
0.879
Thhalv10028239m.g
Eutrema salsugineum
Thhalv10028239m.g
N
0.879
TRAES3BF060500180CFD_g
Triticum aestivum
TRAES3BF060500180CFD_g
N
0.879
Traes_3AS_0D78930B4
Triticum aestivum
Traes_3AS_0D78930B4
N
0.879
Traes_6BL_9B25E6A10
Triticum aestivum
Traes_6BL_9B25E6A10
N
0.903
Traes_6BL_A964BE52B
Triticum aestivum
Traes_6BL_A964BE52B
N
0.903
Traes_6DL_3DCFAB31F
Triticum aestivum
Traes_6DL_3DCFAB31F
N
0.903
Traes_7BS_A0A8B25DF
Triticum aestivum
Traes_7BS_A0A8B25DF
N
0.847
Traes_7DS_4053B6E88
Triticum aestivum
Traes_7DS_4053B6E88
N
0.847
TRIUR3_11692
Triticum urartu
TRIUR3_11692
N
0.879
TRIUR3_14379
Triticum urartu
TRIUR3_14379
N
0.847
TRIUR3_27166
Triticum urartu
TRIUR3_27166
N
0.903
VIT_14s0006g01470
Vitis vinifera
VIT_14s0006g01470
N
0.879