ENSDORG00000006908 (Dipodomys ordii)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSDORG00000006908 T033873_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Bhlhe40
M00119_2.00 		Mus musculus
DCACGTGMN
NKCACGTGH		 PBM
Badis et al.(2009)
Bhlhb2_1274 		0.914 1.000
Bhlhe40
M01738_2.00 		Mus musculus
NCACRNBN
NVNYGTGN		 PBM
Weirauch et al.(2014)
pTH4330 		0.914 1.000
BHLHE40
M02788_2.00 		Homo sapiens
NKCACGTGMH
DKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB2_1 		0.914 1.000
Bhlhe40
M02817_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_1 		0.914 1.000
Bhlhe40
M02818_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_2 		0.914 1.000
BHLHE40
M04126_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_HT-SELEX 		0.914 1.000
BHLHE40
M07798_2.00 		Homo sapiens
DCACGTGMSN
NSKCACGTGH		 ChIP-seq
Gerstein et al.(2012)
HepG2_BHLHE40_HudsonAlpha 		0.914 1.000
BHLHE40
M08726_2.00 		Homo sapiens
DDCACGTGMS
SKCACGTGHH		 Misc
Kulakovskiy et al.(2013)
BHE40_HUMAN.H11MO.0.A 		0.914 1.000
Bhlhe40
M08761_2.00 		Mus musculus
DCACGTGMS
SKCACGTGH		 Misc
Kulakovskiy et al.(2013)
BHE40_MOUSE.H11MO.0.A 		0.914 1.000
BHLHE40
M09456_2.00 		Homo sapiens
DCACGTGMNN
NNKCACGTGH		 Misc
Heinz et al.(2010)
HepG2-BHLHE40_GSE31477 		0.914 1.000
BHLHE40
M09842_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BHLHE40_03 		0.914 1.000
BHLHE40
M09843_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q2 		0.914 1.000
BHLHE40
M09844_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q3 		0.914 1.000
BHLHE40
M09845_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STRA13_01 		0.914 1.000
BHLHE40
M04127_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_Methyl-HT-SELEX 		0.914 1.000
Bhlhe41
M01739_2.00 		Mus musculus
NMNCGTGMN
NKCACGNKN		 PBM
Weirauch et al.(2014)
pTH5060 		0.914 0.981
BHLHE41
M02782_2.00 		Homo sapiens
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB3_1 		0.914 0.981
BHLHE41
M02783_2.00 		Homo sapiens
RKCACGTGAY
RTCACGTGMY		 SELEX
Jolma et al.(2013)
BHLHE41_1 		0.914 0.981
BHLHE41
M04106_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_HT-SELEX 		0.914 0.981
BHLHE41
M09833_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q2 		0.914 0.981
BHLHE41
M09834_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q3 		0.914 0.981
BHLHE41
M04107_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_Methyl-HT-SELEX 		0.914 0.981
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDORP00000006473 bHLH 54 108

Links

Other bHLH family TFs
Other Dipodomys ordii TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA006734 Oryza indica BGIOSGA006734 I 0.000
BGIOSGA007649 Oryza indica BGIOSGA007649 I 0.000
GRMZM2G098904 Zea mays GRMZM2G098904 I 0.000
LPERR02G04950 Leersia perrieri LPERR02G04950 I 0.000
MDP0000441891 Malus domestica MDP0000441891 I 0.000
OBART02G05680 Oryza barthii OBART02G05680 I 0.000
OBART02G11580 Oryza barthii OBART02G11580 I 0.000
OGLUM02G05620 Oryza glumaepatula OGLUM02G05620 I 0.000
OGLUM02G11500 Oryza glumaepatula OGLUM02G11500 I 0.000
OMERI02G06470 Oryza meridionalis OMERI02G06470 I 0.000
OMERI02G12230 Oryza meridionalis OMERI02G12230 I 0.000
ONIVA02G06040 Oryza nivara ONIVA02G06040 I 0.000
ONIVA02G12920 Oryza nivara ONIVA02G12920 I 0.000
OPUNC02G10230 Oryza punctata OPUNC02G10230 I 0.000
ORGLA02G0052000 Oryza glaberrima ORGLA02G0052000 I 0.000
ORGLA02G0104200 Oryza glaberrima ORGLA02G0104200 I 0.000
ORUFI02G05790 Oryza rufipogon ORUFI02G05790 I 0.000
ORUFI02G11610 Oryza rufipogon ORUFI02G11610 I 0.000
OS02G0175100 Oryza sativa OS02G0175100 I 0.000
OS02G0266800 Oryza sativa OS02G0266800 D 0.000
Pavir.Aa03364 Panicum virgatum Pavir.Aa03364 I 0.000
Pavir.Ab00505 Panicum virgatum Pavir.Ab00505 I 0.000
PDK_20s1417191g003 Phoenix dactylifera PDK_20s1417191g003 I 0.000
Sb04g005020 Sorghum bicolor Sb04g005020 I 0.000
Si017778m.g Setaria italica Si017778m.g I 0.000