tcf21 (Oryzias latipes)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSORLG00000016491 T036467_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Msc
M01730_2.00 		Mus musculus
NVCRKMYGBN
NVCRKMYGBN		 PBM
Weirauch et al.(2014)
pTH5112 		0.914 1.000
MSC
M02801_2.00 		Homo sapiens
AACAGCTGTT
AACAGCTGTT		 SELEX
Jolma et al.(2013)
MSC_1 		0.914 1.000
MSC
M04183_2.00 		Homo sapiens
NRMCAGMTGBYN
NRVCAKCTGKYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_1 		0.914 1.000
MSC
M04184_2.00 		Homo sapiens
NRVCAYVTGBYN
NRVCABRTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_2 		0.914 1.000
MSC
M04187_2.00 		Homo sapiens
NRMCAGCTGBYV
BRVCAGCTGKYN		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_1 		0.914 1.000
MSC
M04188_2.00 		Homo sapiens
BRMCATATGKYN
NRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_2 		0.914 1.000
MSC
M04185_2.00 		Homo sapiens
NRVCAGCTGBBN
NVVCAGCTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_1 		0.914 1.000
MSC
M04186_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_2 		0.914 1.000
MSC
M04189_2.00 		Homo sapiens
BRACAGCTGTYV
BRACAGCTGTYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_1 		0.914 1.000
MSC
M04190_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_2 		0.914 1.000
Tcf21
M01746_2.00 		Mus musculus
RMCAKMTGK
MCAKMTGKY		 PBM
Weirauch et al.(2014)
pTH5087 		0.914 0.981
Tcf21
M02819_2.00 		Mus musculus
VNAACAGCTGTTVN
NBAACAGCTGTTNB		 SELEX
Jolma et al.(2013)
Tcf21_1 		0.914 0.981
TCF21
M04092_2.00 		Homo sapiens
BAACAGCTGBYN
NRVCAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_1 		0.914 0.981
TCF21
M04093_2.00 		Homo sapiens
NRCCATATGKYV
BRMCATATGGYN		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_2 		0.914 0.981
TCF21
M04094_2.00 		Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_1 		0.914 0.981
TCF21
M04095_2.00 		Homo sapiens
BACCATATGKYV
BRMCATATGGTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_2 		0.914 0.981
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000020645 bHLH 72 124

Links

Other bHLH family TFs
Other Oryzias latipes TFs

188 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB05588.1 Alternaria brassicicola AB05588.1 N
ACRE_065310 Acremonium chrysogenum ACRE_065310 I
BAUCODRAFT_122462 Baudoinia compniacensis BAUCODRAFT_122462 I
BBA_06902 Beauveria bassiana BBA_06902 I
Bcin07g03570 Botrytis cinerea Bcin07g03570 N
CFIO01_09529 Colletotrichum fioriniae CFIO01_09529 I
CH063_07756 Colletotrichum higginsianum CH063_07756 I
CMQ_3833 Grosmannia clavigera CMQ_3833 I
Cob_02853 Colletotrichum orbiculare Cob_02853 I
COCSADRAFT_146273 Bipolaris sorokiniana COCSADRAFT_146273 I
CPUR_05349 Claviceps purpurea CPUR_05349 I
CSUB01_05661 Colletotrichum sublineola CSUB01_05661 I
DOTSEDRAFT_166261 Dothistroma septosporum DOTSEDRAFT_166261 N
estExt_fgenesh2_pg.C_120136 Neurospora discreta estExt_fgenesh2_pg.C_120136 I
estExt_Genewise1.C_32477 Cryphonectria parasitica estExt_Genewise1.C_32477 I
estExt_Genewise1Plus.C_320202 Mycosphaerella fijiensis estExt_Genewise1Plus.C_320202 N
e_gw1.82.71.1 Nectria haematococca e_gw1.82.71.1 I
F503_03916 Ophiostoma piceae uamh F503_03916 I
F503_04451 Ophiostoma piceae uamh F503_04451 I
FFUJ_04549 Fusarium fujikuroi FFUJ_04549 I
FOXG_06378 Fusarium oxysporum FOXG_06378 I
FPSE_07181 Fusarium pseudograminearum FPSE_07181 I
FVEG_04228 Fusarium verticillioides FVEG_04228 I
GGTG_04125 Gaeumannomyces graminis GGTG_04125 I
GGTG_10910 Gaeumannomyces graminis GGTG_10910 I
GLRG_07219 Colletotrichum graminicola GLRG_07219 I
HMPREF1624_04479 Sporothrix schenckii HMPREF1624_04479 I
LEMA_P116160.1 Leptosphaeria maculans LEMA_P116160.1 N
M437DRAFT_58098 Aureobasidium melanogenum M437DRAFT_58098 N
M438DRAFT_343903 Aureobasidium pullulans M438DRAFT_343903 N
MAJ_02866 Metarhizium majus MAJ_02866 I
MBR_01984 Metarhizium brunneum MBR_01984 I
MGU_02665 Metarhizium guizhouense MGU_02665 I
MYCFIDRAFT_131283 Pseudocercospora fijiensis MYCFIDRAFT_131283 N
NCU05308 Neurospora crassa NCU05308 D
NechaG49895 Fusarium solani NechaG49895 I
OCS_03653 Ophiocordyceps sinensis OCS_03653 I
OIDMADRAFT_108168 Oidiodendron maius OIDMADRAFT_108168 I
PFICI_05140 Pestalotiopsis fici PFICI_05140 I
PODANS_3_4010 Podospora anserina PODANS_3_4010 I
S40285_08437 Stachybotrys chlorohalonata S40285_08437 I
S40288_04589 Stachybotrys chartarum S40288_04589 I
SBOR_0518 Sclerotinia borealis SBOR_0518 I
SMAC_01681 Sordaria macrospora SMAC_01681 I
SNOG_13376 Stagonospora nodorum SNOG_13376 I
SPBR_05575 Sporothrix brasiliensis SPBR_05575 I
SS1G_01905 Sclerotinia sclerotiorum SS1G_01905 I
TRIATDRAFT_294558 Trichoderma atroviride TRIATDRAFT_294558 I
TRIVIDRAFT_213406 Trichoderma virens TRIVIDRAFT_213406 I
VDAG_08009 Verticillium dahliae VDAG_08009 I
VDBG_01253 Verticillium alfalfae VDBG_01253 I
VDBG_01253 Verticillium albo atrum VDBG_01253 I
VHEMI00550 Torrubiella hemipterigena VHEMI00550 I
X797_005973 Metarhizium robertsii X797_005973 I