CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSTOG00000021007
(
Ictidomys tridecemlineatus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSSTOG00000021007
T037524_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Bhlhe41
M01739_2.00
Mus musculus
NMNCGTGMN
NKCACGNKN
PBM
Weirauch et al.(2014)
pTH5060
0.914
1.000
BHLHE41
M02782_2.00
Homo sapiens
NKCACGTGMN
NKCACGTGMN
SELEX
Jolma et al.(2013)
BHLHB3_1
0.914
1.000
BHLHE41
M02783_2.00
Homo sapiens
RKCACGTGAY
RTCACGTGMY
SELEX
Jolma et al.(2013)
BHLHE41_1
0.914
1.000
BHLHE41
M04106_2.00
Homo sapiens
VTCACGTGAB
VTCACGTGAB
SELEX
Yin et al.(2017)
BHLHE41_eDBD_HT-SELEX
0.914
1.000
BHLHE41
M09833_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEC2_Q2
0.914
1.000
BHLHE41
M09834_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEC2_Q3
0.914
1.000
BHLHE41
M04107_2.00
Homo sapiens
RTCACGTGAY
RTCACGTGAY
SELEX
Yin et al.(2017)
BHLHE41_eDBD_Methyl-HT-SELEX
0.914
1.000
Bhlhe40
M00119_2.00
Mus musculus
DCACGTGMN
NKCACGTGH
PBM
Badis et al.(2009)
Bhlhb2_1274
0.914
0.981
Bhlhe40
M01738_2.00
Mus musculus
NCACRNBN
NVNYGTGN
PBM
Weirauch et al.(2014)
pTH4330
0.914
0.981
BHLHE40
M02788_2.00
Homo sapiens
NKCACGTGMH
DKCACGTGMN
SELEX
Jolma et al.(2013)
BHLHB2_1
0.914
0.981
Bhlhe40
M02817_2.00
Mus musculus
NKCACGTGMN
NKCACGTGMN
SELEX
Jolma et al.(2013)
Bhlhb2_1
0.914
0.981
Bhlhe40
M02818_2.00
Mus musculus
NKCACGTGMN
NKCACGTGMN
SELEX
Jolma et al.(2013)
Bhlhb2_2
0.914
0.981
BHLHE40
M04126_2.00
Homo sapiens
VTCACGTGAB
VTCACGTGAB
SELEX
Yin et al.(2017)
BHLHE40_eDBD_HT-SELEX
0.914
0.981
BHLHE40
M07798_2.00
Homo sapiens
DCACGTGMSN
NSKCACGTGH
ChIP-seq
Gerstein et al.(2012)
HepG2_BHLHE40_HudsonAlpha
0.914
0.981
BHLHE40
M08726_2.00
Homo sapiens
DDCACGTGMS
SKCACGTGHH
Misc
Kulakovskiy et al.(2013)
BHE40_HUMAN.H11MO.0.A
0.914
0.981
Bhlhe40
M08761_2.00
Mus musculus
DCACGTGMS
SKCACGTGH
Misc
Kulakovskiy et al.(2013)
BHE40_MOUSE.H11MO.0.A
0.914
0.981
BHLHE40
M09456_2.00
Homo sapiens
DCACGTGMNN
NNKCACGTGH
Misc
Heinz et al.(2010)
HepG2-BHLHE40_GSE31477
0.914
0.981
BHLHE40
M09842_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BHLHE40_03
0.914
0.981
BHLHE40
M09843_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEC1_Q2
0.914
0.981
BHLHE40
M09844_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEC1_Q3
0.914
0.981
BHLHE40
M09845_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STRA13_01
0.914
0.981
BHLHE40
M04127_2.00
Homo sapiens
RTCACGTGAY
RTCACGTGAY
SELEX
Yin et al.(2017)
BHLHE40_eDBD_Methyl-HT-SELEX
0.914
0.981
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSTOP00000019129
bHLH
46
100
KLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLKALT
Links
Other
bHLH
family TFs
Other
Ictidomys tridecemlineatus
TFs
117 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AARA005398
Anopheles arabiensis
AARA005398
N
0.000
AATE013347
Anopheles atroparvus
AATE013347
N
0.000
ACEP13748
Atta cephalotes
ACEP13748
N
0.000
ACUA015214
Anopheles culicifacies
ACUA015214
N
0.000
ADIR004989
Anopheles dirus
ADIR004989
N
0.000
AFAF002833
Anopheles farauti
AFAF002833
N
0.000
AFUN008632
Anopheles funestus
AFUN008632
N
0.000
AMAM016984
Anopheles maculatus
AMAM016984
N
0.000
ASIM_0001581901
Anisakis simplex
ASIM_0001581901
N
0.000
ASIS022569
Anopheles sinensis
ASIS022569
N
0.000
ASIS022602
Anopheles sinensis
ASIS022602
N
0.000
ASTEI07322
Anopheles stephensi
ASTEI07322
N
0.000
BGIBMGA006133
Bombyx mori
BGIBMGA006133
N
0.000
CLEC007059
Cimex lectularius
CLEC007059
N
0.000
CLEC007062
Cimex lectularius
CLEC007062
N
0.000
CPIJ002496
Culex quinquefasciatus
CPIJ002496
N
0.000
CPIJ012536
Culex quinquefasciatus
CPIJ012536
N
0.000
CpipJ_CPIJ002496
Culex pipiens
CpipJ_CPIJ002496
N
0.000
CpipJ_CPIJ012536
Culex pipiens
CpipJ_CPIJ012536
N
0.000
DME_0000858201
Dracunculus medinensis
DME_0000858201
N
0.000
GPUH_0002286201
Gongylonema pulchrum
GPUH_0002286201
N
0.000
gw.266.126.1
Branchiostoma floridae
gw.266.126.1
N
0.000
ISCW020918
Ixodes scapularis
ISCW020918
N
0.000
L889_g12163
Steinernema feltiae
L889_g12163
N
0.000
L893_g23375
Steinernema glaseri
L893_g23375
N
0.000
LCUP009738
Lucilia cuprina
LCUP009738
N
0.000
LDEC020738
Leptinotarsa decemlineata
LDEC020738
N
0.000
MCINX006866
Melitaea cinxia
MCINX006866
N
0.000
MESCA008698
Megaselia scalaris
MESCA008698
N
0.000
Myotis_brandtii_Gfi1_10004111
Myotis brandtii
Myotis_brandtii_Gfi1_10004111
N
0.000
Ocbimv22006972m.g
Octopus bimaculoides
Ocbimv22006972m.g
N
0.000
PPAI008930
Phlebotomus papatasi
PPAI008930
N
0.000
RPRC005967
Rhodnius prolixus
RPRC005967
N
0.000
RPRC005969
Rhodnius prolixus
RPRC005969
N
0.000
SBAD_0001083101
Soboliphyme baturini
SBAD_0001083101
N
0.000
scaffold152-EXSNAP2012.15
Pristionchus exspectatus
scaffold152-EXSNAP2012.15
N
0.000
SINV20314
Solenopsis invicta
SINV20314
N
0.000
SINV24825
Solenopsis invicta
SINV24825
N
0.000
SMAR014254
Strigamia maritima
SMAR014254
N
0.000
SMAR014824
Strigamia maritima
SMAR014824
N
0.000
SMRZ_0001144901
Schistosoma margrebowiei
SMRZ_0001144901
N
0.000
SPER_0000300601
Spirometra erinaceieuropaei
SPER_0000300601
N
0.000