CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MITF
(
Tupaia belangeri
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSTBEG00000017713
T037610_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Mitf
M01741_2.00
Mus musculus
NCDCGTGAYN
NRTCACGHGN
PBM
Weirauch et al.(2014)
pTH5465
0.914
1.000
MITF
M08058_2.00
Homo sapiens
NNNDRTCACGTGAYHNNN
NNNDRTCACGTGAYHNNN
ChIP-seq
Mathelier et al.(2014)
MA0620.2
0.914
1.000
MITF
M08740_2.00
Homo sapiens
YCAYGTGACH
DGTCACRTGR
Misc
Kulakovskiy et al.(2013)
MITF_HUMAN.H11MO.0.A
0.914
1.000
Mitf
M08765_2.00
Mus musculus
BCHYGTGACY
RGTCACRDGV
Misc
Kulakovskiy et al.(2013)
MITF_MOUSE.H11MO.0.A
0.914
1.000
Mitf
M09475_2.00
Mus musculus
GTCACRWGVB
VBCWYGTGAC
Misc
Heinz et al.(2010)
MastCells-MITF_GSE48085
0.914
1.000
MITF
M09880_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MITF_Q4
0.914
1.000
MITF
M09881_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MITF_Q6
0.914
1.000
Tfe3
M01715_2.00
Mus musculus
NCDCRTGAYN
NRTCAYGHGN
PBM
Weirauch et al.(2014)
pTH5057
0.914
0.981
Tfe3
M05833_2.00
Mus musculus
CACGTGAY
RTCACGTG
SMiLE-seq
Isakova et al.(2017)
TFE3
0.914
0.981
Tfe3
M08743_2.00
Mus musculus
TCACGTGACH
DGTCACGTGA
Misc
Kulakovskiy et al.(2013)
TFE3_MOUSE.H11MO.0.A
0.914
0.981
Tfe3
M09884_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TFEA_01
0.914
0.981
TFE3
M02773_2.00
Homo sapiens
VNCACGTGMY
RKCACGTGNB
SELEX
Jolma et al.(2013)
TFE3_1
0.871
0.963
TFE3
M04058_2.00
Homo sapiens
YVCACGTGAYN
NRTCACGTGBR
SELEX
Yin et al.(2017)
TFE3_eDBD_HT-SELEX
0.871
0.963
TFE3
M08709_2.00
Homo sapiens
TCACGTGACH
DGTCACGTGA
Misc
Kulakovskiy et al.(2013)
TFE3_HUMAN.H11MO.0.B
0.871
0.963
TFE3
M09790_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TFEA_Q6
0.871
0.963
TFE3
M04059_2.00
Homo sapiens
NRTCACATGBB
VVCATGTGAYN
SELEX
Yin et al.(2017)
TFE3_eDBD_Methyl-HT-SELEX
0.871
0.963
Tfec
M00755_2.00
Mus musculus
NNCACGTGNN
NNCACGTGNN
PBM
Weirauch et al.(2013)
pTH2885
0.870
0.926
Tfec
M01736_2.00
Mus musculus
NCNCRTGVYN
NRBCAYGNGN
PBM
Weirauch et al.(2014)
pTH5065
0.870
0.926
TFEC
M02778_2.00
Homo sapiens
RNCACRTGAB
VTCAYGTGNY
SELEX
Jolma et al.(2013)
TFEC_1
0.870
0.907
TFEC
M04078_2.00
Homo sapiens
NVCACGTGACN
NGTCACGTGBN
SELEX
Yin et al.(2017)
TFEC_eDBD_HT-SELEX
0.870
0.907
TFEC
M04079_2.00
Homo sapiens
VNCATGTGAYN
NRTCACATGNB
SELEX
Yin et al.(2017)
TFEC_eDBD_Methyl-HT-SELEX
0.870
0.907
Tfeb
M01728_2.00
Mus musculus
CWCGTGAY
RTCACGWG
PBM
Weirauch et al.(2014)
pTH5072
0.855
0.889
TFEB
M02781_2.00
Homo sapiens
RNCACGTGAY
RTCACGTGNY
SELEX
Jolma et al.(2013)
TFEB_1
0.855
0.889
TFEB
M02727_2.00
Homo sapiens
RTCACGTGAY
RTCACGTGAY
SELEX
Jolma et al.(2010)
TFEB_dimer
0.855
0.889
TFEB
M04088_2.00
Homo sapiens
YVCACGTGAYN
NRTCACGTGBR
SELEX
Yin et al.(2017)
TFEB_eDBD_HT-SELEX
0.855
0.889
TFEB
M08718_2.00
Homo sapiens
CACGTGAYY
RRTCACGTG
Misc
Kulakovskiy et al.(2013)
TFEB_HUMAN.H11MO.0.C
0.855
0.889
Tfeb
M08753_2.00
Mus musculus
CACGTGAYY
RRTCACGTG
Misc
Kulakovskiy et al.(2013)
TFEB_MOUSE.H11MO.0.C
0.855
0.889
TFEB
M04089_2.00
Homo sapiens
VNCATGTGAYN
NRTCACATGNB
SELEX
Yin et al.(2017)
TFEB_eDBD_Methyl-HT-SELEX
0.855
0.889
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTBEP00000015407
bHLH
312
365
KKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQ
Links
Other
bHLH
family TFs
Other
Tupaia belangeri
TFs
242 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R010744
Calypte anna
Aan_R010744
I
ALUE_0000283301
Ascaris lumbricoides
ALUE_0000283301
N
ASU_06082
Ascaris suum
ASU_06082
N
BXY_1667600
Bursaphelenchus xylophilus
BXY_1667600
N
CapteG226618
Capitella teleta
CapteG226618
I
CGI_10008753
Crassostrea gigas
CGI_10008753
I
DAPPUDRAFT_3881
Daphnia pulex
DAPPUDRAFT_3881
I
DME_0000045201
Dracunculus medinensis
DME_0000045201
N
ENSACAG00000008549
Anolis carolinensis
ENSACAG00000008549
I
ENSGALG00000003599
Gallus gallus
ENSGALG00000003599
I
ENSMGAG00000004357
Meleagris gallopavo
ENSMGAG00000004357
I
ENSPFOG00000007309
Poecilia formosa
ENSPFOG00000007309
I
ENSTGUG00000007382
Taeniopygia guttata
ENSTGUG00000007382
I
fgenesh2_kg.scaffold_118000001
Branchiostoma floridae
fgenesh2_kg.scaffold_118000001
I
HMEL015536
Heliconius melpomene
HMEL015536
I
Hsal_04471--XP_624689.2_APIME
Harpegnathos saltator
Hsal_04471--XP_624689.2_APIME
I
KGM_08622
Danaus plexippus
KGM_08622
I
L596_g22450
Steinernema carpocapsae
L596_g22450
N
L889_g2700
Steinernema feltiae
L889_g2700
N
L892_g7838
Steinernema scapterisci
L892_g7838
N
nDi.2.2.2.g09215
Dirofilaria immitis
nDi.2.2.2.g09215
N
Ogr08509
Ophisaurus gracilis
Ogr08509
I
Pvit_16222
Pogona vitticeps
Pvit_16222
I
SMAR009230
Strigamia maritima
SMAR009230
I
TCLT_0000448101
Thelazia callipaeda
TCLT_0000448101
N
tetur04g00890
Tetranychus urticae
tetur04g00890
I
WBGene00244664
Onchocerca volvulus
WBGene00244664
N
YQE_10853
Dendroctonus ponderosae
YQE_10853
I