ARNT (Tetraodon nigroviridis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSTNIG00000008064 T037730_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arnt
M01719_2.00 		Mus musculus
NNKCACGTGMNN
NNKCACGTGMNN		 PBM
Weirauch et al.(2014)
pTH5111 		0.914 1.000
ARNT
M08732_2.00 		Homo sapiens
NKRCGTGMN
NKCACGYMN		 Misc
Kulakovskiy et al.(2013)
ARNT_HUMAN.H11MO.0.B 		0.914 1.000
ARNT
M09459_2.00 		Homo sapiens
KCACGTNN
NNACGTGM		 Misc
Heinz et al.(2010)
T47D-HIF1b_GSE59937 		0.914 1.000
ARNT
M09863_2.00 		Homo sapiens
NVNNNCACGTGNHHHN
NDDDNCACGTGNNNBN		 Transfac
Matys et al.(2006)
V$ARNT_01 		0.914 1.000
ARNT
M09864_2.00 		Homo sapiens
VVNNNRKCACGTGMYNNNBB
VVNNNRKCACGTGMYNNNBB		 Transfac
Matys et al.(2006)
V$ARNT_02 		0.914 1.000
ARNT
M09865_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ARNT_Q6_01 		0.914 1.000
ARNT
M09866_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ARNT_Q6 		0.914 1.000
tgo
M06005_2.00 		Drosophila melanogaster
RDDTCGTGAYY
RRTCACGAHHY		 B1H
Zhu et al.(2011)
dys_tgo_SANGER_5_FBgn0015014 		0.914 0.926
tgo
M06006_2.00 		Drosophila melanogaster
SDTTGCGTGAC
GTCACGCAAHS		 B1H
Zhu et al.(2011)
ss_tgo_SANGER_10_FBgn0015014 		0.914 0.926
tgo
M06007_2.00 		Drosophila melanogaster
KCACGTGAC
GTCACGTGM		 B1H
Zhu et al.(2011)
tgo_cyc_SANGER_5_FBgn0015014 		0.914 0.926
tgo
M06008_2.00 		Drosophila melanogaster
RTACGTGAC
GTCACGTAY		 B1H
Zhu et al.(2011)
tgo_sima_SANGER_5_FBgn0015014 		0.914 0.926
tgo
M06009_2.00 		Drosophila melanogaster
VWACGTGACY
RGTCACGTWB		 B1H
Zhu et al.(2011)
tgo_sim_SANGER_5_FBgn0015014 		0.914 0.926
tgo
M06010_2.00 		Drosophila melanogaster
TGCGTGAC
GTCACGCA		 B1H
Zhu et al.(2011)
tgo_ss_SANGER_5_FBgn0015014 		0.914 0.926
tgo
M06011_2.00 		Drosophila melanogaster
RCACGTGAC
GTCACGTGY		 B1H
Zhu et al.(2011)
tgo_tai_SANGER_5_FBgn0015014 		0.914 0.926
tgo
M06012_2.00 		Drosophila melanogaster
VTACGTGACB
VGTCACGTAB		 B1H
Zhu et al.(2011)
tgo_trh_SANGER_5_FBgn0015014 		0.914 0.926
Arnt2
M01720_2.00 		Mus musculus
NCAYRTGMNN
NNKCAYRTGN		 PBM
Weirauch et al.(2014)
pTH5159 		0.862 0.944
ARNT2
M04170_2.00 		Homo sapiens
RDCACGTGMN
NKCACGTGHY		 SELEX
Yin et al.(2017)
ARNT2_eDBD_HT-SELEX 		0.862 0.944
Arnt2
M09888_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ARNT2_01 		0.862 0.944
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000010888 bHLH 74 127

Links

Other bHLH family TFs
Other Tetraodon nigroviridis TFs

199 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00047p00131170 Amborella trichopoda AMTR_s00047p00131170 I
Aquca_013_00902 Aquilegia coerulea Aquca_013_00902 I
Aquca_037_00296 Aquilegia coerulea Aquca_037_00296 I
BGIOSGA013244 Oryza indica BGIOSGA013244 I
BGIOSGA031868 Oryza indica BGIOSGA031868 I
Bo2g007300 Brassica oleracea Bo2g007300 I
Bo3g185290 Brassica oleracea Bo3g185290 I
Bo6g051360 Brassica oleracea Bo6g051360 I
Bostr.3640s0136 Boechera stricta Bostr.3640s0136 I
Bostr.6758s0027 Boechera stricta Bostr.6758s0027 I
Bra028725 Brassica rapa Bra028725 I
Bra030855 Brassica rapa Bra030855 I
BRADI4G01150 Brachypodium distachyon BRADI4G01150 I
Cagra.0001s0028 Capsella grandiflora Cagra.0001s0028 I
Carubv10010337m.g Capsella rubella Carubv10010337m.g I
CORT_0A11870 Candida orthopsilosis CORT_0A11870 I
CPAG_04505 Candida parapsilosis CPAG_04505 I
ENSAMXG00000003582 Astyanax mexicanus ENSAMXG00000003582 I
ENSAPLG00000006951 Anas platyrhynchos ENSAPLG00000006951 I
ENSGMOG00000012435 Gadus morhua ENSGMOG00000012435 I
ENSONIG00000017061 Oreochromis niloticus ENSONIG00000017061 I
ENSPMAG00000006175 Petromyzon marinus ENSPMAG00000006175 I
e_gw1.1.2234.1 Mucor circinelloides e_gw1.1.2234.1 I
e_gw1.11.241.1 Mucor circinelloides e_gw1.11.241.1 I
e_gwh1.1.1.994.1 Pichia stipitis e_gwh1.1.1.994.1 I
fgeneshPB_pg.12__294 Phycomyces blakesleeanus fgeneshPB_pg.12__294 I
GLOINDRAFT_79885 Rhizophagus irregularis GLOINDRAFT_79885 I
Gorai.004G244700 Gossypium raimondii Gorai.004G244700 I
GRMZM2G161418 Zea mays GRMZM2G161418 I
LELG_01062 Lodderomyces elongisporus LELG_01062 I
LotgiG129673 Lottia gigantea LotgiG129673 I
LPERR10G07850 Leersia perrieri LPERR10G07850 I
MDP0000289755 Malus domestica MDP0000289755 I
mgf009543m Mimulus guttatus mgf009543m I
MLOC_37365 Hordeum vulgare MLOC_37365 I
MTR_4g029010 Medicago truncatula MTR_4g029010 I
OLONG_010453 Oryza longistaminata OLONG_010453 I
OMERI10G08240 Oryza meridionalis OMERI10G08240 I
ONIVA01G08510 Oryza nivara ONIVA01G08510 I
OPUNC01G04710 Oryza punctata OPUNC01G04710 I
orange1.1g029591m.g Citrus sinensis orange1.1g029591m.g I
ORGLA06G0285000 Oryza glaberrima ORGLA06G0285000 I
ORGLA10G0095800 Oryza glaberrima ORGLA10G0095800 I
ORUFI03G29280 Oryza rufipogon ORUFI03G29280 I
ORUFI10G11330 Oryza rufipogon ORUFI10G11330 I
OS10G0432300 Oryza sativa OS10G0432300 I
Pavir.Ib03379 Panicum virgatum Pavir.Ib03379 I
Pavir.Ib04166 Panicum virgatum Pavir.Ib04166 I
Pavir.J18057 Panicum virgatum Pavir.J18057 I
Pavir.J26398 Panicum virgatum Pavir.J26398 I
PDK_20s1328661g002 Phoenix dactylifera PDK_20s1328661g002 I
PICST_38880 Scheffersomyces stipitis PICST_38880 I
PNEG_00724 Pneumocystis murina PNEG_00724 I
POPTR_0019s04890 Populus trichocarpa POPTR_0019s04890 I
PredSwiss_ASS2010_1907.1 Pneumocystis carinii PredSwiss_ASS2010_1907.1 I
PredSwiss_CON251.1 Pneumocystis carinii PredSwiss_CON251.1 I
PredSwiss_EST785.1 Pneumocystis carinii PredSwiss_EST785.1 I
RHTO_08020 Rhodosporidium toruloides RHTO_08020 I
RO3G_15549 Rhizopus oryzae RO3G_15549 I
RO3G_16620 Rhizopus oryzae RO3G_16620 I
SapurV1A.0308s0180 Salix purpurea SapurV1A.0308s0180 I
Sb08g022273 Sorghum bicolor Sb08g022273 I
SELMODRAFT_16705 Selaginella moellendorffii SELMODRAFT_16705 I
SELMODRAFT_37142 Selaginella moellendorffii SELMODRAFT_37142 I
Si023295m.g Setaria italica Si023295m.g I
Si039719m.g Setaria italica Si039719m.g I
SJAG_00421 Schizosaccharomyces japonicus SJAG_00421 I
SKUD_163604 Saccharomyces kudriavzevii SKUD_163604 I
SPAPADRAFT_58486 Spathaspora passalidarum SPAPADRAFT_58486 I
SU7_0942 Saccharomyces arboricola SU7_0942 I
tbp Gasterosteus aculeatus ENSGACG00000016147 I
tbp Danio rerio ENSDARG00000014994 I
tbp Oryzias latipes ENSORLG00000010757 I
TBP2 Arabidopsis thaliana AT1G55520 I
TBP2 Arabidopsis lyrata fgenesh2_kg.1__4564__AT1G55520.2 I
TBPL2 Microcebus murinus ENSMICG00000000943 I
TBPL2 Meleagris gallopavo ENSMGAG00000013657 I
TBPL2 Gallus gallus ENSGALG00000012145 I
tbpl2 Tetraodon nigroviridis ENSTNIG00000002597 I
TBPL2 Tursiops truncatus ENSTTRG00000002034 I
tbpl2.L Xenopus laevis XB-GENE-876147 I
Thhalv10022351m.g Eutrema salsugineum Thhalv10022351m.g I
Traes_4AL_D48452758 Triticum aestivum Traes_4AL_D48452758 I
Traes_5AS_03EE89960 Triticum aestivum Traes_5AS_03EE89960 I
Traes_5BS_AD70A5AF7 Triticum aestivum Traes_5BS_AD70A5AF7 I
trf3 Takifugu rubripes ENSTRUG00000009283 I