bhlhe41 (Tetraodon nigroviridis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSTNIG00000012152 T037760_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Bhlhe41
M01739_2.00 		Mus musculus
NMNCGTGMN
NKCACGNKN		 PBM
Weirauch et al.(2014)
pTH5060 		0.889 0.944
BHLHE41
M02782_2.00 		Homo sapiens
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB3_1 		0.889 0.944
BHLHE41
M02783_2.00 		Homo sapiens
RKCACGTGAY
RTCACGTGMY		 SELEX
Jolma et al.(2013)
BHLHE41_1 		0.889 0.944
BHLHE41
M04106_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_HT-SELEX 		0.889 0.944
BHLHE41
M09833_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q2 		0.889 0.944
BHLHE41
M09834_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q3 		0.889 0.944
BHLHE41
M04107_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_Methyl-HT-SELEX 		0.889 0.944
Bhlhe40
M00119_2.00 		Mus musculus
DCACGTGMN
NKCACGTGH		 PBM
Badis et al.(2009)
Bhlhb2_1274 		0.889 0.926
Bhlhe40
M01738_2.00 		Mus musculus
NCACRNBN
NVNYGTGN		 PBM
Weirauch et al.(2014)
pTH4330 		0.889 0.926
BHLHE40
M02788_2.00 		Homo sapiens
NKCACGTGMH
DKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB2_1 		0.889 0.926
Bhlhe40
M02817_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_1 		0.889 0.926
Bhlhe40
M02818_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_2 		0.889 0.926
BHLHE40
M04126_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_HT-SELEX 		0.889 0.926
BHLHE40
M07798_2.00 		Homo sapiens
DCACGTGMSN
NSKCACGTGH		 ChIP-seq
Gerstein et al.(2012)
HepG2_BHLHE40_HudsonAlpha 		0.889 0.926
BHLHE40
M08726_2.00 		Homo sapiens
DDCACGTGMS
SKCACGTGHH		 Misc
Kulakovskiy et al.(2013)
BHE40_HUMAN.H11MO.0.A 		0.889 0.926
Bhlhe40
M08761_2.00 		Mus musculus
DCACGTGMS
SKCACGTGH		 Misc
Kulakovskiy et al.(2013)
BHE40_MOUSE.H11MO.0.A 		0.889 0.926
BHLHE40
M09456_2.00 		Homo sapiens
DCACGTGMNN
NNKCACGTGH		 Misc
Heinz et al.(2010)
HepG2-BHLHE40_GSE31477 		0.889 0.926
BHLHE40
M09842_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BHLHE40_03 		0.889 0.926
BHLHE40
M09843_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q2 		0.889 0.926
BHLHE40
M09844_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q3 		0.889 0.926
BHLHE40
M09845_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STRA13_01 		0.889 0.926
BHLHE40
M04127_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_Methyl-HT-SELEX 		0.889 0.926
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000015116 bHLH 47 101

Links

Other bHLH family TFs
Other Tetraodon nigroviridis TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSBTAP00000050946-D1 Bos grunniens ENSBTAP00000050946-D1 I 0.000
ENSCSAG00000012508 Chlorocebus sabaeus ENSCSAG00000012508 I 0.000
ENSMPUG00000008568 Mustela putorius furo ENSMPUG00000008568 I 0.000
ENSNLEG00000015192 Nomascus leucogenys ENSNLEG00000015192 I 0.000
ENSOARG00000016682 Ovis aries ENSOARG00000016682 I 0.000
ENSP00000248643 Macaca fascicularis ENSP00000248643 I 0.000
ENSPANG00000007445 Papio anubis ENSPANG00000007445 I 0.000
ENSPPYG00000017826 Pongo abelii ENSPPYG00000017826 I 0.000
ENSSTOG00000001846 Ictidomys tridecemlineatus ENSSTOG00000001846 I 0.000
ENSTSYG00000012629 Tarsius syrichta ENSTSYG00000012629 I 0.000
MTERF1 Tupaia belangeri ENSTBEG00000005760 I 0.000
MTERF1 Sus scrofa ENSSSCG00000015309 I 0.000
Mterf1 Rattus norvegicus ENSRNOG00000007899 I 0.000
MTERF1 Pan troglodytes ENSPTRG00000019388 I 0.000
MTERF1 Tursiops truncatus ENSTTRG00000010321 I 0.000
MTERF1 Vicugna pacos ENSVPAG00000005202 I 0.000
MTERF1 Canis familiaris ENSCAFG00000001908 I 0.000
MTERF1 Otolemur garnettii ENSOGAG00000001378 I 0.000
MTERF1 Oryctolagus cuniculus ENSOCUG00000010902 I 0.000
MTERF1 Macaca mulatta ENSMMUG00000015516 I 0.000
MTERF1 Myotis lucifugus ENSMLUG00000011330 I 0.000
MTERF1 Loxodonta africana ENSLAFG00000000054 I 0.000
MTERF1 Gorilla gorilla ENSGGOG00000025995 I 0.000
MTERF1 Homo sapiens ENSG00000127989 D 0.000
MTERF1 Felis catus ENSFCAG00000030885 I 0.000
MTERF1 Erinaceus europaeus ENSEEUG00000013448 I 0.000
MTERF1 Cavia porcellus ENSCPOG00000003510 I 0.000
MTERF1 Bos taurus ENSBTAG00000045617 I 0.000
Mterf1a Mus musculus ENSMUSG00000040429 I 0.000
Mterf1b Mus musculus ENSMUSG00000053178 I 0.000
Myotis_brandtii_MTERF_10033812 Myotis brandtii Myotis_brandtii_MTERF_10033812 I 0.000