CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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M408DRAFT_69509
(
Serendipita vermifera
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
M408DRAFT_69509
T041119_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIM28614
bHLH
39
59
RRATHNAVERLRRETLNGRFL
Links
Other
bHLH
family TFs
Other
Serendipita vermifera
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
27647.m000179
Ricinus communis
27647.m000179
I
29751.m001898
Ricinus communis
29751.m001898
I
29889.m003245
Ricinus communis
29889.m003245
I
30180.m001019
Ricinus communis
30180.m001019
I
AMTR_s00012p00251530
Amborella trichopoda
AMTR_s00012p00251530
I
AMTR_s00019p00208460
Amborella trichopoda
AMTR_s00019p00208460
I
AMTR_s00101p00128190
Amborella trichopoda
AMTR_s00101p00128190
I
AMTR_s00176p00045260
Amborella trichopoda
AMTR_s00176p00045260
I
Aquca_003_00124
Aquilegia coerulea
Aquca_003_00124
I
Aquca_003_00615
Aquilegia coerulea
Aquca_003_00615
I
Aquca_009_00074
Aquilegia coerulea
Aquca_009_00074
I
Aquca_009_00923
Aquilegia coerulea
Aquca_009_00923
I
Aquca_091_00086
Aquilegia coerulea
Aquca_091_00086
I
ARR14
Arabidopsis thaliana
AT2G01760
D
ARR14
Arabidopsis lyrata
scaffold_500093.1
I
ARR14
Vitis vinifera
VIT_01s0011g05830
I
AT3G10760
Arabidopsis thaliana
AT3G10760
I
AT5G05090
Arabidopsis thaliana
AT5G05090
D
BGIOSGA000023
Oryza indica
BGIOSGA000023
I
BGIOSGA004786
Oryza indica
BGIOSGA004786
I
BGIOSGA018058
Oryza indica
BGIOSGA018058
I
Bo1g010830
Brassica oleracea
Bo1g010830
I
Bo1g141480
Brassica oleracea
Bo1g141480
I
Bo2g134560
Brassica oleracea
Bo2g134560
I
Bo3g003150
Brassica oleracea
Bo3g003150
I
Bo3g132770
Brassica oleracea
Bo3g132770
I
Bo4g012890
Brassica oleracea
Bo4g012890
I
Bo5g019990
Brassica oleracea
Bo5g019990
I
Bo5g137150
Brassica oleracea
Bo5g137150
I
Bo9g177390
Brassica oleracea
Bo9g177390
I
BOA
Arabidopsis thaliana
AT5G59570
I
Bostr.13129s0456
Boechera stricta
Bostr.13129s0456
I
Bostr.18473s0293
Boechera stricta
Bostr.18473s0293
I
Bostr.19424s0999
Boechera stricta
Bostr.19424s0999
I
Bostr.26833s0280
Boechera stricta
Bostr.26833s0280
I
Bostr.27991s0013
Boechera stricta
Bostr.27991s0013
I
Bostr.9345s0035
Boechera stricta
Bostr.9345s0035
I
Bra004593
Brassica rapa
Bra004593
I
Bra005837
Brassica rapa
Bra005837
I
Bra009087
Brassica rapa
Bra009087
I
Bra018204
Brassica rapa
Bra018204
I
Bra029866
Brassica rapa
Bra029866
I
Bra033809
Brassica rapa
Bra033809
I
Bra034144
Brassica rapa
Bra034144
I
BRADI1G47400
Brachypodium distachyon
BRADI1G47400
I
BRADI1G69480
Brachypodium distachyon
BRADI1G69480
I
BRADI2G25380
Brachypodium distachyon
BRADI2G25380
I
BRADI2G54787
Brachypodium distachyon
BRADI2G54787
I
BRADI2G62067
Brachypodium distachyon
BRADI2G62067
I
BRADI3G54120
Brachypodium distachyon
BRADI3G54120
I
Cagra.0448s0013
Capsella grandiflora
Cagra.0448s0013
I
Cagra.0834s0003
Capsella grandiflora
Cagra.0834s0003
I
Cagra.0995s0002
Capsella grandiflora
Cagra.0995s0002
I
Cagra.1317s0057
Capsella grandiflora
Cagra.1317s0057
I
Cagra.1504s0014
Capsella grandiflora
Cagra.1504s0014
I
Cagra.1642s0062
Capsella grandiflora
Cagra.1642s0062
I
Cagra.2235s0034
Capsella grandiflora
Cagra.2235s0034
I
Carubv10003130m.g
Capsella rubella
Carubv10003130m.g
I
Carubv10014134m.g
Capsella rubella
Carubv10014134m.g
I
Carubv10017603m.g
Capsella rubella
Carubv10017603m.g
I
Carubv10018465m.g
Capsella rubella
Carubv10018465m.g
I
Carubv10024859m.g
Capsella rubella
Carubv10024859m.g
I
Carubv10024931m.g
Capsella rubella
Carubv10024931m.g
I
Carubv10026895m.g
Capsella rubella
Carubv10026895m.g
I
cassava19434.valid.m1
Manihot esculenta
cassava19434.valid.m1
I
cassava20582.m1
Manihot esculenta
cassava20582.m1
I
cassava34353.m1
Manihot esculenta
cassava34353.m1
I
cassava43032.valid.m1
Manihot esculenta
cassava43032.valid.m1
I
Ca_02989
Cicer arietinum
Ca_02989
I
Ca_07144
Cicer arietinum
Ca_07144
I
Ca_16282
Cicer arietinum
Ca_16282
I
CHLREDRAFT_111844
Chlamydomonas reinhardtii
CHLREDRAFT_111844
I
chr1.CM0269.130.nd
Lotus japonicus
chr1.CM0269.130.nd
I
chr3.CM0792.160.nd
Lotus japonicus
chr3.CM0792.160.nd
N
Ciclev10004470m.g
Citrus clementina
Ciclev10004470m.g
I
Ciclev10004989m.g
Citrus clementina
Ciclev10004989m.g
I
Ciclev10012203m.g
Citrus clementina
Ciclev10012203m.g
I
Ciclev10014527m.g
Citrus clementina
Ciclev10014527m.g
I
Ciclev10028658m.g
Citrus clementina
Ciclev10028658m.g
I
Cla008353
Citrullus lanatus
Cla008353
I
Cla009424
Citrullus lanatus
Cla009424
I
Cla012286
Citrullus lanatus
Cla012286
I
Cla013530
Citrullus lanatus
Cla013530
N
Cla017714
Citrullus lanatus
Cla017714
I
Cla022101
Citrullus lanatus
Cla022101
I
Cucsa.117700
Cucumis sativus
Cucsa.117700
I
Cucsa.138850
Cucumis sativus
Cucsa.138850
N
Cucsa.140020
Cucumis sativus
Cucsa.140020
I
Cucsa.252760
Cucumis sativus
Cucsa.252760
I
Cucsa.358530
Cucumis sativus
Cucsa.358530
I
estExt_fgenesh2_pg.C_Chr_120081
Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_120081
I
est_orfs.10_1861_4270447:1
Micromonas pusilla
est_orfs.10_1861_4270447:1
I
Eucgr.A00189
Eucalyptus grandis
Eucgr.A00189
I
Eucgr.A02201
Eucalyptus grandis
Eucgr.A02201
I
Eucgr.B02313
Eucalyptus grandis
Eucgr.B02313
I
Eucgr.G02094
Eucalyptus grandis
Eucgr.G02094
I
Eucgr.K01670
Eucalyptus grandis
Eucgr.K01670
I
EuGene.0000090108
Micromonas pusilla
EuGene.0000090108
I
EuGene.0000130210
Micromonas pusilla
EuGene.0000130210
I
EuGene.0600010100
Micromonas sp RCC299
EuGene.0600010100
I
evm.TU.supercontig_2.186
Carica papaya
evm.TU.supercontig_2.186
I
evm.TU.supercontig_81.106
Carica papaya
evm.TU.supercontig_81.106
I
evm.TU.supercontig_9.105
Carica papaya
evm.TU.supercontig_9.105
I
evm.TU.supercontig_92.70
Carica papaya
evm.TU.supercontig_92.70
I
e_gw1.1.649.1
Ostreococcus RCC809
e_gw1.1.649.1
I
F775_08927
Aegilops tauschii
F775_08927
I
F775_26936
Aegilops tauschii
F775_26936
I
F775_32153
Aegilops tauschii
F775_32153
I
fgenesh2_kg.8__1908__AT5G59570.1
Arabidopsis lyrata
fgenesh2_kg.8__1908__AT5G59570.1
I
fgeneshCV_pg.C_scaffold_15000185
Chlorella vulgaris
fgeneshCV_pg.C_scaffold_15000185
I
gene17673-v1.0-hybrid
Fragaria vesca
gene17673-v1.0-hybrid
I
gene30204-v1.0-hybrid
Fragaria vesca
gene30204-v1.0-hybrid
I
GLYMA02G21820
Glycine max
GLYMA02G21820
I
GLYMA03G27890
Glycine max
GLYMA03G27890
I
GLYMA07G37220
Glycine max
GLYMA07G37220
I
GLYMA09G04470
Glycine max
GLYMA09G04470
I
GLYMA11G14490
Glycine max
GLYMA11G14490
I
GLYMA12G06406
Glycine max
GLYMA12G06406
I
GLYMA15G15520
Glycine max
GLYMA15G15520
I
GLYMA17G03380
Glycine max
GLYMA17G03380
I
GLYMA19G30700
Glycine max
GLYMA19G30700
I
Gorai.001G112200
Gossypium raimondii
Gorai.001G112200
I
Gorai.002G029200
Gossypium raimondii
Gorai.002G029200
I
Gorai.002G230800
Gossypium raimondii
Gorai.002G230800
I
Gorai.003G129100
Gossypium raimondii
Gorai.003G129100
I
Gorai.005G156900
Gossypium raimondii
Gorai.005G156900
I
Gorai.006G259700
Gossypium raimondii
Gorai.006G259700
I
Gorai.007G351500
Gossypium raimondii
Gorai.007G351500
I
Gorai.009G097100
Gossypium raimondii
Gorai.009G097100
I
Gorai.011G196400
Gossypium raimondii
Gorai.011G196400
I
GRMZM2G067702
Zea mays
GRMZM2G067702
I
GRMZM2G074908
Zea mays
GRMZM2G074908
I
GRMZM2G099797
Zea mays
GRMZM2G099797
I
GRMZM2G126834
Zea mays
GRMZM2G126834
I
GRMZM2G398055
Zea mays
GRMZM2G398055
I
GRMZM2G471600
Zea mays
GRMZM2G471600
I
GSMUA_Achr10G02420_001
Musa acuminata
GSMUA_Achr10G02420_001
I
GSMUA_Achr10G12590_001
Musa acuminata
GSMUA_Achr10G12590_001
I
GSMUA_Achr11G14170_001
Musa acuminata
GSMUA_Achr11G14170_001
I
GSMUA_Achr1G22230_001
Musa acuminata
GSMUA_Achr1G22230_001
I
GSMUA_Achr2G01920_001
Musa acuminata
GSMUA_Achr2G01920_001
I
GSMUA_Achr5G07060_001
Musa acuminata
GSMUA_Achr5G07060_001
I
GSMUA_Achr5G27500_001
Musa acuminata
GSMUA_Achr5G27500_001
I
GSMUA_Achr8G05880_001
Musa acuminata
GSMUA_Achr8G05880_001
I
GSMUA_Achr8G30850_001
Musa acuminata
GSMUA_Achr8G30850_001
I
GSMUA_AchrUn_randomG18750_001
Musa acuminata
GSMUA_AchrUn_randomG18750_001
I
gw1.104.128.1
Physcomitrella patens
gw1.104.128.1
I
gw1.15.242.1
Coccomyxa subellipsoidea C169
gw1.15.242.1
I
gw1.27.80.1
Physcomitrella patens
gw1.27.80.1
I
gw1.29.164.1
Physcomitrella patens
gw1.29.164.1
I
gw1.29.165.1
Physcomitrella patens
gw1.29.165.1
I
gw1.37.160.1
Volvox carteri
gw1.37.160.1
I
LPERR01G31830
Leersia perrieri
LPERR01G31830
I
LPERR01G39850
Leersia perrieri
LPERR01G39850
I
LPERR03G08040
Leersia perrieri
LPERR03G08040
I
LPERR05G13030
Leersia perrieri
LPERR05G13030
I
Lus10010442.g
Linum usitatissimum
Lus10010442.g
I
Lus10012102.g
Linum usitatissimum
Lus10012102.g
I
Lus10027291.g
Linum usitatissimum
Lus10027291.g
I
Lus10038996.g
Linum usitatissimum
Lus10038996.g
I
Lus10040780.g
Linum usitatissimum
Lus10040780.g
I
MDP0000224740
Malus domestica
MDP0000224740
I
MDP0000290818
Malus domestica
MDP0000290818
I
MDP0000669078
Malus domestica
MDP0000669078
I
MDP0000672486
Malus domestica
MDP0000672486
I
MDP0000846313
Malus domestica
MDP0000846313
I
mg021488m
Mimulus guttatus
mg021488m
I
mgf001591m
Mimulus guttatus
mgf001591m
I
mgf008790m
Mimulus guttatus
mgf008790m
I
mgf010113m
Mimulus guttatus
mgf010113m
I
mgf012203m
Mimulus guttatus
mgf012203m
I
mgf014801m
Mimulus guttatus
mgf014801m
I
mgf014863m
Mimulus guttatus
mgf014863m
I
MLOC_24056
Hordeum vulgare
MLOC_24056
I
MLOC_24962
Hordeum vulgare
MLOC_24962
I
MLOC_37446
Hordeum vulgare
MLOC_37446
I
MLOC_76165
Hordeum vulgare
MLOC_76165
I
MTR_4g064730
Medicago truncatula
MTR_4g064730
I
MTR_4g121020
Medicago truncatula
MTR_4g121020
I
MTR_7g089010
Medicago truncatula
MTR_7g089010
I
MYBC1
Arabidopsis thaliana
AT2G40970
I
MYBC1
Arabidopsis lyrata
scaffold_402901.1
I
OB03G19140
Oryza brachyantha
OB03G19140
I
OBART01G37040
Oryza barthii
OBART01G37040
I
OBART01G45440
Oryza barthii
OBART01G45440
I
OBART03G08950
Oryza barthii
OBART03G08950
I
OGLUM01G41000
Oryza glumaepatula
OGLUM01G41000
I
OGLUM01G49830
Oryza glumaepatula
OGLUM01G49830
I
OGLUM03G09080
Oryza glumaepatula
OGLUM03G09080
I
OLONG_001321
Oryza longistaminata
OLONG_001321
I
OLONG_002370
Oryza longistaminata
OLONG_002370
I
OLONG_010516
Oryza longistaminata
OLONG_010516
I
OMERI01G34110
Oryza meridionalis
OMERI01G34110
I
OMERI01G42240
Oryza meridionalis
OMERI01G42240
I
OMERI03G08390
Oryza meridionalis
OMERI03G08390
I
OMERI05G06680
Oryza meridionalis
OMERI05G06680
I
ONIVA01G41940
Oryza nivara
ONIVA01G41940
I
ONIVA01G51730
Oryza nivara
ONIVA01G51730
I
ONIVA05G17050
Oryza nivara
ONIVA05G17050
I
ONIVA06G01160
Oryza nivara
ONIVA06G01160
I
OPUNC01G35910
Oryza punctata
OPUNC01G35910
I
OPUNC01G44410
Oryza punctata
OPUNC01G44410
I
OPUNC03G08640
Oryza punctata
OPUNC03G08640
I
OPUNC05G14480
Oryza punctata
OPUNC05G14480
I
orange1.1g005938m.g
Citrus sinensis
orange1.1g005938m.g
I
orange1.1g020690m.g
Citrus sinensis
orange1.1g020690m.g
I
orange1.1g047187m.g
Citrus sinensis
orange1.1g047187m.g
I
ORGLA01G0309000
Oryza glaberrima
ORGLA01G0309000
I
ORGLA01G0392100
Oryza glaberrima
ORGLA01G0392100
I
ORGLA03G0086800
Oryza glaberrima
ORGLA03G0086800
I
ORGLA05G0141400
Oryza glaberrima
ORGLA05G0141400
I
ORUFI01G40390
Oryza rufipogon
ORUFI01G40390
I
ORUFI01G48960
Oryza rufipogon
ORUFI01G48960
I
ORUFI03G09090
Oryza rufipogon
ORUFI03G09090
I
OS01G0844900
Oryza sativa
OS01G0844900
I
OS05G0412000
Oryza sativa
OS05G0412000
I
Pavir.Ba03246
Panicum virgatum
Pavir.Ba03246
I
Pavir.Ea04181
Panicum virgatum
Pavir.Ea04181
I
Pavir.Eb04079
Panicum virgatum
Pavir.Eb04079
I
Pavir.Ia04946
Panicum virgatum
Pavir.Ia04946
I
Pavir.Ib00921
Panicum virgatum
Pavir.Ib00921
I
Pavir.J06465
Panicum virgatum
Pavir.J06465
I
Pavir.J10623
Panicum virgatum
Pavir.J10623
I
PCL1
Arabidopsis thaliana
AT3G46640
I
PCL1
Arabidopsis lyrata
fgenesh2_kg.5__1030__AT3G46640.2
I
PCL1
Oryza sativa
OS01G0971800
I
PDK_20s1346241g001
Phoenix dactylifera
PDK_20s1346241g001
I
PGSC0003DMG400002144
Solanum tuberosum
PGSC0003DMG400002144
I
PGSC0003DMG400003196
Solanum tuberosum
PGSC0003DMG400003196
I
PGSC0003DMG400007174
Solanum tuberosum
PGSC0003DMG400007174
I
PGSC0003DMG400023534
Solanum tuberosum
PGSC0003DMG400023534
I
PGSC0003DMG400028100
Solanum tuberosum
PGSC0003DMG400028100
I
PGSC0003DMG400029514
Solanum tuberosum
PGSC0003DMG400029514
I
PGSC0003DMG400030328
Solanum tuberosum
PGSC0003DMG400030328
I
PGSC0003DMG401025624
Solanum tuberosum
PGSC0003DMG401025624
I
PK02601.1
Cannabis sativa
PK02601.1
I
PK05290.1
Cannabis sativa
PK05290.1
I
PK23977.1
Cannabis sativa
PK23977.1
I
PK26059.1
Cannabis sativa
PK26059.1
I
Pm000693
Prunus mume
Pm000693
I
Pm031149
Prunus mume
Pm031149
I
POPTR_0001s25040
Populus trichocarpa
POPTR_0001s25040
I
POPTR_0006s03340
Populus trichocarpa
POPTR_0006s03340
I
POPTR_0008s13490
Populus trichocarpa
POPTR_0008s13490
I
POPTR_0008s22990
Populus trichocarpa
POPTR_0008s22990
I
POPTR_0009s03990
Populus trichocarpa
POPTR_0009s03990
I
POPTR_0010s00320
Populus trichocarpa
POPTR_0010s00320
I
POPTR_0010s11600
Populus trichocarpa
POPTR_0010s11600
I
POPTR_0016s03240
Populus trichocarpa
POPTR_0016s03240
I
PRUPE_ppa002408mg
Prunus persica
PRUPE_ppa002408mg
I
PRUPE_ppa008837mg
Prunus persica
PRUPE_ppa008837mg
I
PRUPE_ppa026577mg
Prunus persica
PRUPE_ppa026577mg
I
RR21
Oryza indica
BGIOSGA012149
I
RR21
Oryza sativa
OS03G0224200
I
SapurV1A.0015s0530
Salix purpurea
SapurV1A.0015s0530
I
SapurV1A.0041s0350
Salix purpurea
SapurV1A.0041s0350
I
SapurV1A.0055s0320
Salix purpurea
SapurV1A.0055s0320
I
SapurV1A.0128s0090
Salix purpurea
SapurV1A.0128s0090
I
SapurV1A.0159s0180
Salix purpurea
SapurV1A.0159s0180
I
SapurV1A.1916s0020
Salix purpurea
SapurV1A.1916s0020
I
Sb01g042400
Sorghum bicolor
Sb01g042400
I
Sb03g039610
Sorghum bicolor
Sb03g039610
I
Sb03g047330
Sorghum bicolor
Sb03g047330
I
Sb09g020340
Sorghum bicolor
Sb09g020340
I
scaffold_301238.1
Arabidopsis lyrata
scaffold_301238.1
I
scaffold_600469.1
Arabidopsis lyrata
scaffold_600469.1
I
SELMODRAFT_115021
Selaginella moellendorffii
SELMODRAFT_115021
I
SELMODRAFT_173793
Selaginella moellendorffii
SELMODRAFT_173793
I
SELMODRAFT_36646
Selaginella moellendorffii
SELMODRAFT_36646
I
SELMODRAFT_440049
Selaginella moellendorffii
SELMODRAFT_440049
I
SELMODRAFT_450181
Selaginella moellendorffii
SELMODRAFT_450181
I
Si002016m.g
Setaria italica
Si002016m.g
I
Si002653m.g
Setaria italica
Si002653m.g
I
Si034517m.g
Setaria italica
Si034517m.g
I
Solyc01g065540.2
Solanum lycopersicum
Solyc01g065540.2
I
Solyc04g008050.2
Solanum lycopersicum
Solyc04g008050.2
I
Solyc05g054390.2
Solanum lycopersicum
Solyc05g054390.2
I
Solyc06g005680.2
Solanum lycopersicum
Solyc06g005680.2
I
Solyc06g076350.2
Solanum lycopersicum
Solyc06g076350.2
I
Solyc07g005140.2
Solanum lycopersicum
Solyc07g005140.2
I
Solyc10g078310.1
Solanum lycopersicum
Solyc10g078310.1
I
Solyc10g080960.1
Solanum lycopersicum
Solyc10g080960.1
I
TCM_011067
Theobroma cacao
TCM_011067
I
TCM_021300
Theobroma cacao
TCM_021300
I
TCM_041791
Theobroma cacao
TCM_041791
I
TCM_045790
Theobroma cacao
TCM_045790
I
Thhalv10002605m.g
Eutrema salsugineum
Thhalv10002605m.g
I
Thhalv10004402m.g
Eutrema salsugineum
Thhalv10004402m.g
I
Thhalv10014387m.g
Eutrema salsugineum
Thhalv10014387m.g
I
Thhalv10017945m.g
Eutrema salsugineum
Thhalv10017945m.g
I
Thhalv10021133m.g
Eutrema salsugineum
Thhalv10021133m.g
I
TRAES3BF076800040CFD_g
Triticum aestivum
TRAES3BF076800040CFD_g
I
Traes_4AS_6486B493A
Triticum aestivum
Traes_4AS_6486B493A
I
Traes_4BL_941E7DE4D
Triticum aestivum
Traes_4BL_941E7DE4D
I
Traes_4DL_2527CA8BF
Triticum aestivum
Traes_4DL_2527CA8BF
I
Traes_6AL_9C9D677D4
Triticum aestivum
Traes_6AL_9C9D677D4
I
Traes_6BL_790C095EE
Triticum aestivum
Traes_6BL_790C095EE
I
Traes_6DL_D1C9CE275
Triticum aestivum
Traes_6DL_D1C9CE275
I
TRIUR3_24314
Triticum urartu
TRIUR3_24314
I
TRIUR3_25342
Triticum urartu
TRIUR3_25342
I
VIT_05s0077g01480
Vitis vinifera
VIT_05s0077g01480
I
VIT_06s0004g05120
Vitis vinifera
VIT_06s0004g05120
I
VIT_08s0040g00900
Vitis vinifera
VIT_08s0040g00900
I
VIT_11s0206g00060
Vitis vinifera
VIT_11s0206g00060
I