POPTR_0005s23930 (Populus trichocarpa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 POPTR_0005s23930 T043814_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0005s23930.1 bHLH 147 194

Links

Other bHLH family TFs
Other Populus trichocarpa TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29598.m000464 Ricinus communis 29598.m000464 N 0.846
29883.m001988 Ricinus communis 29883.m001988 N 0.888
Aquca_017_00590 Aquilegia coerulea Aquca_017_00590 N 0.876
AT1G03040 Arabidopsis thaliana AT1G03040 N 0.858
Bo01031s030 Brassica oleracea Bo01031s030 N 0.858
Bo2g100750 Brassica oleracea Bo2g100750 N 0.858
Bo5g003580 Brassica oleracea Bo5g003580 N 0.858
Bo9g005930 Brassica oleracea Bo9g005930 N 0.858
Bostr.2983s0202 Boechera stricta Bostr.2983s0202 N 0.858
Bra000872 Brassica rapa Bra000872 N 0.858
Bra018539 Brassica rapa Bra018539 N 0.858
Bra033368 Brassica rapa Bra033368 N 0.858
Bra036256 Brassica rapa Bra036256 N 0.858
BRADI3G54070 Brachypodium distachyon BRADI3G54070 I 0.841
Cagra.0635s0023 Capsella grandiflora Cagra.0635s0023 N 0.858
Cagra.0897s0074 Capsella grandiflora Cagra.0897s0074 N 0.858
Carubv10001523m.g Capsella rubella Carubv10001523m.g N 0.858
Carubv10009831m.g Capsella rubella Carubv10009831m.g N 0.858
cassava18573.valid.m1 Manihot esculenta cassava18573.valid.m1 N 0.846
cassava36725.valid.m1 Manihot esculenta cassava36725.valid.m1 N 0.888
Ca_03755 Cicer arietinum Ca_03755 N 0.876
Ca_07790 Cicer arietinum Ca_07790 N 0.888
Ca_12194 Cicer arietinum Ca_12194 N 0.888
chr1.CM0375.380.nc Lotus japonicus chr1.CM0375.380.nc N 0.888
chr5.LjT29J15.30.nc Lotus japonicus chr5.LjT29J15.30.nc N 0.863
Ciclev10001768m.g Citrus clementina Ciclev10001768m.g N 0.856
Ciclev10021443m.g Citrus clementina Ciclev10021443m.g N 0.888
Cla011475 Citrullus lanatus Cla011475 N 0.876
Cla015040 Citrullus lanatus Cla015040 N 0.888
Cucsa.289090 Cucumis sativus Cucsa.289090 N 0.876
Cucsa.388780 Cucumis sativus Cucsa.388780 N 0.888
Eucgr.B01487 Eucalyptus grandis Eucgr.B01487 N 0.888
Eucgr.H04337 Eucalyptus grandis Eucgr.H04337 N 0.876
evm.TU.supercontig_117.94 Carica papaya evm.TU.supercontig_117.94 N 0.876
evm.TU.supercontig_52.97 Carica papaya evm.TU.supercontig_52.97 N 0.852
fgenesh2_kg.1__235__AT1G03040.1 Arabidopsis lyrata fgenesh2_kg.1__235__AT1G03040.1 N 0.858
gene08188-v1.0-hybrid Fragaria vesca gene08188-v1.0-hybrid N 0.876
gene16564-v1.0-hybrid Fragaria vesca gene16564-v1.0-hybrid N 0.876
GLYMA02G16110 Glycine max GLYMA02G16110 N 0.888
GLYMA03G31510 Glycine max GLYMA03G31510 N 0.888
GLYMA10G03690 Glycine max GLYMA10G03690 N 0.888
GLYMA10G30430 Glycine max GLYMA10G30430 N 0.876
GLYMA19G34360 Glycine max GLYMA19G34360 N 0.888
GLYMA20G36770 Glycine max GLYMA20G36770 N 0.876
Gorai.001G242500 Gossypium raimondii Gorai.001G242500 N 0.888
Gorai.004G075200 Gossypium raimondii Gorai.004G075200 N 0.888
Gorai.004G218900 Gossypium raimondii Gorai.004G218900 N 0.888
Gorai.007G141800 Gossypium raimondii Gorai.007G141800 N 0.888
Gorai.007G277200 Gossypium raimondii Gorai.007G277200 N 0.876
GSMUA_Achr4G21070_001 Musa acuminata GSMUA_Achr4G21070_001 I 0.846
GSMUA_Achr5G03100_001 Musa acuminata GSMUA_Achr5G03100_001 I 0.846
Lus10002720.g Linum usitatissimum Lus10002720.g N 0.852
Lus10006587.g Linum usitatissimum Lus10006587.g N 0.846
Lus10014726.g Linum usitatissimum Lus10014726.g N 0.852
Lus10015909.g Linum usitatissimum Lus10015909.g N 0.846
Lus10018761.g Linum usitatissimum Lus10018761.g N 0.852
Lus10024850.g Linum usitatissimum Lus10024850.g N 0.879
MDP0000176749 Malus domestica MDP0000176749 N 0.876
MDP0000295593 Malus domestica MDP0000295593 N 0.876
mgf001465m Mimulus guttatus mgf001465m N 0.902
MTR_1g070870 Medicago truncatula MTR_1g070870 N 0.888
MTR_1g080890 Medicago truncatula MTR_1g080890 N 0.876
orange1.1g022649m.g Citrus sinensis orange1.1g022649m.g N 0.888
PGSC0003DMG400006089 Solanum tuberosum PGSC0003DMG400006089 N 0.876
PGSC0003DMG400013393 Solanum tuberosum PGSC0003DMG400013393 N 0.876
PGSC0003DMG400019334 Solanum tuberosum PGSC0003DMG400019334 N 0.888
PK20184.1 Cannabis sativa PK20184.1 N 0.876
PK25419.1 Cannabis sativa PK25419.1 N 0.888
Pm003525 Prunus mume Pm003525 N 0.876
Pm020229 Prunus mume Pm020229 N 0.876
POPTR_0002s04620 Populus trichocarpa POPTR_0002s04620 N 0.888
PRUPE_ppa008172mg Prunus persica PRUPE_ppa008172mg N 0.876
PRUPE_ppa009299mg Prunus persica PRUPE_ppa009299mg N 0.876
SapurV1A.0006s1290 Salix purpurea SapurV1A.0006s1290 N 0.888
SapurV1A.0860s0050 Salix purpurea SapurV1A.0860s0050 N 0.914
Solyc03g005350.2 Solanum lycopersicum Solyc03g005350.2 N 0.874
Solyc09g065820.2 Solanum lycopersicum Solyc09g065820.2 N 0.888
Solyc09g083220.2 Solanum lycopersicum Solyc09g083220.2 N 0.876
TCM_004217 Theobroma cacao TCM_004217 N 0.888
TCM_026346 Theobroma cacao TCM_026346 N 0.876
Thhalv10008279m.g Eutrema salsugineum Thhalv10008279m.g N 0.858
Thhalv10028824m.g Eutrema salsugineum Thhalv10028824m.g N 0.858
Traes_6BL_AEB13ECDE Triticum aestivum Traes_6BL_AEB13ECDE I 0.841
UNE12 Arabidopsis thaliana AT4G02590 N 0.858
UNE12 Arabidopsis lyrata fgenesh2_kg.6__3435__AT4G02590.2 N 0.858
VIT_05s0020g04620 Vitis vinifera VIT_05s0020g04620 N 0.876
VIT_07s0141g00220 Vitis vinifera VIT_07s0141g00220 N 0.888
VIT_14s0030g02230 Vitis vinifera VIT_14s0030g02230 N 0.876