Pvit_15832 (Pogona vitticeps)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pvit_15832 T047758_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Bhlhe40
M00119_2.00 		Mus musculus
DCACGTGMN
NKCACGTGH		 PBM
Badis et al.(2009)
Bhlhb2_1274 		0.914 1.000
Bhlhe40
M01738_2.00 		Mus musculus
NCACRNBN
NVNYGTGN		 PBM
Weirauch et al.(2014)
pTH4330 		0.914 1.000
BHLHE40
M02788_2.00 		Homo sapiens
NKCACGTGMH
DKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB2_1 		0.914 1.000
Bhlhe40
M02817_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_1 		0.914 1.000
Bhlhe40
M02818_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_2 		0.914 1.000
BHLHE40
M04126_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_HT-SELEX 		0.914 1.000
BHLHE40
M07798_2.00 		Homo sapiens
DCACGTGMSN
NSKCACGTGH		 ChIP-seq
Gerstein et al.(2012)
HepG2_BHLHE40_HudsonAlpha 		0.914 1.000
BHLHE40
M08726_2.00 		Homo sapiens
DDCACGTGMS
SKCACGTGHH		 Misc
Kulakovskiy et al.(2013)
BHE40_HUMAN.H11MO.0.A 		0.914 1.000
Bhlhe40
M08761_2.00 		Mus musculus
DCACGTGMS
SKCACGTGH		 Misc
Kulakovskiy et al.(2013)
BHE40_MOUSE.H11MO.0.A 		0.914 1.000
BHLHE40
M09456_2.00 		Homo sapiens
DCACGTGMNN
NNKCACGTGH		 Misc
Heinz et al.(2010)
HepG2-BHLHE40_GSE31477 		0.914 1.000
BHLHE40
M09842_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BHLHE40_03 		0.914 1.000
BHLHE40
M09843_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q2 		0.914 1.000
BHLHE40
M09844_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q3 		0.914 1.000
BHLHE40
M09845_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STRA13_01 		0.914 1.000
BHLHE40
M04127_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_Methyl-HT-SELEX 		0.914 1.000
Bhlhe41
M01739_2.00 		Mus musculus
NMNCGTGMN
NKCACGNKN		 PBM
Weirauch et al.(2014)
pTH5060 		0.914 0.981
BHLHE41
M02782_2.00 		Homo sapiens
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB3_1 		0.914 0.981
BHLHE41
M02783_2.00 		Homo sapiens
RKCACGTGAY
RTCACGTGMY		 SELEX
Jolma et al.(2013)
BHLHE41_1 		0.914 0.981
BHLHE41
M04106_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_HT-SELEX 		0.914 0.981
BHLHE41
M09833_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q2 		0.914 0.981
BHLHE41
M09834_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q3 		0.914 0.981
BHLHE41
M04107_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_Methyl-HT-SELEX 		0.914 0.981
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_15832 bHLH 58 112

Links

Other bHLH family TFs
Other Pogona vitticeps TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_189484 Agaricus bisporus AGABI2DRAFT_189484 N 0.000
BN946_scf185007.g88 Trametes cinnabarina BN946_scf185007.g88 N 0.000
CC1G_06624 Coprinopsis cinerea CC1G_06624 N 0.000
CERSUDRAFT_110826 Ceriporiopsis subvermispora CERSUDRAFT_110826 N 0.000
estExt_Genewise1Plus.C_10574 Heterobasidion annosum estExt_Genewise1Plus.C_10574 N 0.000
fgenesh1_pg.C_scaffold_13000227 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_13000227 N 0.000
FIBRA_05800 Fibroporia radiculosa FIBRA_05800 N 0.000
FOMPIDRAFT_1022414 Fomitopsis pinicola FOMPIDRAFT_1022414 N 0.000
GALMADRAFT_234645 Galerina marginata GALMADRAFT_234645 N 0.000
GLOTRDRAFT_32332 Gloeophyllum trabeum GLOTRDRAFT_32332 N 0.000
HETIRDRAFT_58809 Heterobasidion irregulare HETIRDRAFT_58809 N 0.000
JAAARDRAFT_29212 Jaapia argillacea JAAARDRAFT_29212 N 0.000
LACBIDRAFT_320896 Laccaria bicolor LACBIDRAFT_320896 N 0.000
M378DRAFT_65406 Amanita muscaria M378DRAFT_65406 N 0.000
M404DRAFT_998367 Pisolithus tinctorius M404DRAFT_998367 N 0.000
M413DRAFT_62953 Hebeloma cylindrosporum M413DRAFT_62953 N 0.000
Moror_4814 Moniliophthora roreri Moror_4814 N 0.000
PAXRUDRAFT_22985 Paxillus rubicundulus PAXRUDRAFT_22985 N 0.000
PHACADRAFT_248056 Phanerochaete carnosa PHACADRAFT_248056 N 0.000
PHLGIDRAFT_439130 Phlebiopsis gigantea PHLGIDRAFT_439130 N 0.000
PILCRDRAFT_85396 Piloderma croceum PILCRDRAFT_85396 N 0.000
SCLCIDRAFT_503769 Scleroderma citrinum SCLCIDRAFT_503769 N 0.000
SERLA73DRAFT_163673 Serpula lacrymans SERLA73DRAFT_163673 N 0.000