cassava64.valid.m1 (Manihot esculenta)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 cassava64.valid.m1 T048116_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gw1.270.82.1
M01758_2.00 		Physcomitrella patens
NCACGTGH
DCACGTGN		 PBM
Weirauch et al.(2014)
pTH8457 		0.853 0.745
BHLH49
M01052_2.00 		Arabidopsis thaliana
NNCACGTGCN
NGCACGTGNN		 PBM
Sullivan et al.(2014)
pTH7309 		0.853 0.725
PK06517.1
M01122_2.00 		Cannabis sativa
NCACGTGC
GCACGTGN		 PBM
Lambert et al.(2019)
pTH10104 		0.853 0.725
BHLH74
M06720_2.00 		Arabidopsis thaliana
SDHSDNDNNCACGTGVNNNNW
WNNNNBCACGTGNNHNHSDHS		 Dap-seq
OMalley et al.(2016)
bHLH74_col_a 		0.853 0.725
BHLH74
M06721_2.00 		Arabidopsis thaliana
CACGTGAY
RTCACGTG		 Dap-seq
OMalley et al.(2016)
bHLH74_colamp_a 		0.853 0.725
BHLH77
M06736_2.00 		Arabidopsis thaliana
NKCACGTGVHNWHNB
VNDWNDBCACGTGMN		 Dap-seq
OMalley et al.(2016)
bHLH77_col_a 		0.853 0.706
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava64.valid.m1 bHLH 143 193

Links

Other bHLH family TFs
Other Manihot esculenta TFs

326 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACEP16468 Atta cephalotes ACEP16468 I
ANCCAN_22289 Ancylostoma caninum ANCCAN_22289 I
Bm3787 Brugia malayi Bm3787 I
CBG05944 Caenorhabditis briggsae CBG05944 I
CBN22467 Caenorhabditis brenneri CBN22467 N
CBN28114 Caenorhabditis brenneri CBN28114 N
Cflo_03542--XP_624213.2_APIME Camponotus floridanus Cflo_03542--XP_624213.2_APIME I
CGOC_0001446101 Cylicostephanus goldi CGOC_0001446101 I
CJA16298 Caenorhabditis japonica CJA16298 N
CRE05362 Caenorhabditis remanei CRE05362 I
CRE12534 Caenorhabditis remanei CRE12534 I
DAPPUDRAFT_303110 Daphnia pulex DAPPUDRAFT_303110 I
DICVIV_13314 Dictyocaulus viviparus DICVIV_13314 N
DICVIV_13447 Dictyocaulus viviparus DICVIV_13447 N
EEL_0000817201 Elaeophora elaphi EEL_0000817201 I
ENSONIG00000014385 Oreochromis niloticus ENSONIG00000014385 I
GB52904 Apis mellifera GB52904 I
HCOI00283900 Haemonchus contortus HCOI00283900 I
HCOI00567800 Haemonchus contortus HCOI00567800 I
HPBE_0002060301 Heligmosomoides bakeri HPBE_0002060301 I
Hsal_04850--XP_624213.2_APIME Harpegnathos saltator Hsal_04850--XP_624213.2_APIME I
ISCW009328 Ixodes scapularis ISCW009328 I
L596_g25556 Steinernema carpocapsae L596_g25556 I
L798_15710 Zootermopsis nevadensis L798_15710 I
L889_g7248 Steinernema feltiae L889_g7248 I
L892_g14860 Steinernema scapterisci L892_g14860 I
L893_g3995 Steinernema glaseri L893_g3995 I
L898_g23217 Steinernema monticolum L898_g23217 I
nAv.1.0.1.g10286 Acanthocheilonema viteae nAv.1.0.1.g10286 I
nDi.2.2.2.g04518 Dirofilaria immitis nDi.2.2.2.g04518 I
nhr-8 Caenorhabditis elegans WBGene00003607 I
NR1I2 Oryctolagus cuniculus ENSOCUG00000006125 I
nr1i3 Xenopus tropicalis XB-GENE-479859 I
NV10187 Nasonia vitripennis NV10187 I
PTRK_0000134600 Parastrongyloides trichosuri PTRK_0000134600 N
TELCIR_04193 Teladorsagia circumcincta TELCIR_04193 I
tetur34g00750 Tetranychus urticae tetur34g00750 I
WUBG_13334 Wuchereria bancrofti WUBG_13334 I