Ocbimv22024043m.g (Octopus bimaculoides)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Ocbimv22024043m.g T048861_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HAND2
M04150_2.00 		Homo sapiens
MACACCTGBD
HVCAGGTGTK		 SELEX
Yin et al.(2017)
HAND2_eDBD_HT-SELEX 		0.866 0.885
HAND2
M04151_2.00 		Homo sapiens
MACACCTGYD
HRCAGGTGTK		 SELEX
Yin et al.(2017)
HAND2_eDBD_Methyl-HT-SELEX 		0.866 0.885
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ocbimv22024043m.p bHLH 89 141

Links

Other bHLH family TFs
Other Octopus bimaculoides TFs

86 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30006.m000282 Ricinus communis 30006.m000282 N
30170.m013669 Ricinus communis 30170.m013669 N
AMTR_s00159p00062070 Amborella trichopoda AMTR_s00159p00062070 N
Aquca_009_00241 Aquilegia coerulea Aquca_009_00241 N
AT2G41710 Arabidopsis thaliana AT2G41710 N
BBM Vitis vinifera VIT_04s0023g00950 N
BGIOSGA019793 Oryza indica BGIOSGA019793 N
BGIOSGA023402 Oryza indica BGIOSGA023402 N
Bo3g035770 Brassica oleracea Bo3g035770 N
Bo4g013420 Brassica oleracea Bo4g013420 N
Bostr.11568s0008 Boechera stricta Bostr.11568s0008 N
Bra004641 Brassica rapa Bra004641 N
BRADI2G26987 Brachypodium distachyon BRADI2G26987 N
Cagra.0914s0005 Capsella grandiflora Cagra.0914s0005 N
Carubv10023272m.g Capsella rubella Carubv10023272m.g N
cassava19560.m1 Manihot esculenta cassava19560.m1 N
cassava40681.m1 Manihot esculenta cassava40681.m1 N
cassava421.valid.m1 Manihot esculenta cassava421.valid.m1 N
Ca_07237 Cicer arietinum Ca_07237 N
chr3.CM0452.130.nd Lotus japonicus chr3.CM0452.130.nd N
Ciclev10005012m.g Citrus clementina Ciclev10005012m.g N
Cla022214 Citrullus lanatus Cla022214 N
Cucsa.338170 Cucumis sativus Cucsa.338170 N
Cucsa.353040 Cucumis sativus Cucsa.353040 I
Eucgr.A02341 Eucalyptus grandis Eucgr.A02341 N
evm.TU.supercontig_129.70 Carica papaya evm.TU.supercontig_129.70 N
evm.TU.supercontig_224.4 Carica papaya evm.TU.supercontig_224.4 N
evm.TU.supercontig_99.39 Carica papaya evm.TU.supercontig_99.39 N
F775_10869 Aegilops tauschii F775_10869 N
fgenesh2_kg.4__2311__AT2G41710.2 Arabidopsis lyrata fgenesh2_kg.4__2311__AT2G41710.2 N
gene02470-v1.0-hybrid Fragaria vesca gene02470-v1.0-hybrid N
GLYMA02G33090 Glycine max GLYMA02G33090 N
GLYMA03G29240 Glycine max GLYMA03G29240 N
GLYMA19G31960 Glycine max GLYMA19G31960 N
Gorai.003G091500 Gossypium raimondii Gorai.003G091500 N
GRMZM2G013657 Zea mays GRMZM2G013657 N
GRMZM2G146688 Zea mays GRMZM2G146688 N
LjSGA_012098.1 Lotus japonicus LjSGA_012098.1 N
LPERR05G11930 Leersia perrieri LPERR05G11930 N
Lus10000965.g Linum usitatissimum Lus10000965.g N
Lus10011730.g Linum usitatissimum Lus10011730.g N
Lus10039650.g Linum usitatissimum Lus10039650.g N
Lus10040140.g Linum usitatissimum Lus10040140.g N
MDP0000314518 Malus domestica MDP0000314518 N
MDP0000803527 Malus domestica MDP0000803527 N
mgf017600m Mimulus guttatus mgf017600m N
mgf019897m Mimulus guttatus mgf019897m N
MLOC_7325 Hordeum vulgare MLOC_7325 N
MTR_7g091390 Medicago truncatula MTR_7g091390 N
OB03G42600 Oryza brachyantha OB03G42600 N
OB05G22940 Oryza brachyantha OB05G22940 N
OB06G31060 Oryza brachyantha OB06G31060 N
OBART05G15060 Oryza barthii OBART05G15060 N
OBART06G23380 Oryza barthii OBART06G23380 N
OGLUM05G15890 Oryza glumaepatula OGLUM05G15890 N
OGLUM06G03000 Oryza glumaepatula OGLUM06G03000 N
OLONG_002212 Oryza longistaminata OLONG_002212 N
OLONG_020459 Oryza longistaminata OLONG_020459 N
OMERI05G13370 Oryza meridionalis OMERI05G13370 N
OMERI06G23370 Oryza meridionalis OMERI06G23370 N
ONIVA05G15390 Oryza nivara ONIVA05G15390 N
OPUNC05G13110 Oryza punctata OPUNC05G13110 N
orange1.1g018292m.g Citrus sinensis orange1.1g018292m.g N
ORGLA05G0129100 Oryza glaberrima ORGLA05G0129100 N
Pavir.Ca01410 Panicum virgatum Pavir.Ca01410 N
Pavir.Cb01456 Panicum virgatum Pavir.Cb01456 N
PDK_20s1313371g002 Phoenix dactylifera PDK_20s1313371g002 N
PK12273.1 Cannabis sativa PK12273.1 N
PK15670.1 Cannabis sativa PK15670.1 N
PK18855.1 Cannabis sativa PK18855.1 N
POPTR_0006s04820 Populus trichocarpa POPTR_0006s04820 N
POPTR_0016s05670 Populus trichocarpa POPTR_0016s05670 N
PRUPE_ppa006202mg Prunus persica PRUPE_ppa006202mg N
SapurV1A.0037s0030 Salix purpurea SapurV1A.0037s0030 N
SapurV1A.3066s0020 Salix purpurea SapurV1A.3066s0020 N
Sb09g019190 Sorghum bicolor Sb09g019190 N
Si021952m.g Setaria italica Si021952m.g N
Solyc02g030210.2 Solanum lycopersicum Solyc02g030210.2 N
TCM_024554 Theobroma cacao TCM_024554 N
Thhalv10016812m.g Eutrema salsugineum Thhalv10016812m.g N
Traes_6AS_53FA034C9 Triticum aestivum Traes_6AS_53FA034C9 N
TRIUR3_07433 Triticum urartu TRIUR3_07433 N
VIT_08s0007g08580 Vitis vinifera VIT_08s0007g08580 N