gene11436-v1.0-hybrid (Fragaria vesca)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 gene11436-v1.0-hybrid T049843_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH104
M01706_2.00 		Arabidopsis thaliana
GGCACGTGCC
GGCACGTGCC		 PBM
Weirauch et al.(2014)
pTH7365 		0.856 0.765
BHLH104
M06737_2.00 		Arabidopsis thaliana
GVCACGTGBMDDBHNSDNBH
DVNHSNDVHHKVCACGTGBC		 Dap-seq
OMalley et al.(2016)
bHLH104_col_b 		0.856 0.765
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna11436.1-v1.0-hybrid bHLH 75 125

Links

Other bHLH family TFs
Other Fragaria vesca TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA023199 Oryza indica BGIOSGA023199 N
BRADI1G19740 Brachypodium distachyon BRADI1G19740 N
GRMZM2G148940 Zea mays GRMZM2G148940 N
MLOC_68272 Hordeum vulgare MLOC_68272 N
OB06G27780 Oryza brachyantha OB06G27780 N
ORGLA06G0166100 Oryza glaberrima ORGLA06G0166100 N
OS06G0597800 Oryza sativa OS06G0597800 N
Pavir.J21189 Panicum virgatum Pavir.J21189 N
Pavir.J26020 Panicum virgatum Pavir.J26020 N
PDK_20s1456351g001 Phoenix dactylifera PDK_20s1456351g001 N
Sb10g023270 Sorghum bicolor Sb10g023270 N
Si007937m.g Setaria italica Si007937m.g N
Traes_7BL_8C67B476B Triticum aestivum Traes_7BL_8C67B476B N
Traes_7DL_2C70F034C Triticum aestivum Traes_7DL_2C70F034C N
TRIUR3_10746 Triticum urartu TRIUR3_10746 N