Gorai.011G292100 (Gossypium raimondii)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Gorai.011G292100 T050104_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK01630.1
M01118_2.00 		Cannabis sativa
GCACGTGD
HCACGTGC		 PBM
Lambert et al.(2019)
pTH11426 		0.894 0.840
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.011G292100.1 bHLH 62 111

Links

Other bHLH family TFs
Other Gossypium raimondii TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29814.m000735 Ricinus communis 29814.m000735 I 0.894
BHLH51 Arabidopsis thaliana AT2G40200 N 0.844
Bo3g034790 Brassica oleracea Bo3g034790 N 0.844
Bo4g188890 Brassica oleracea Bo4g188890 N 0.844
Bostr.23794s0037 Boechera stricta Bostr.23794s0037 N 0.844
Bra000177 Brassica rapa Bra000177 I 0.866
Bra017024 Brassica rapa Bra017024 N 0.844
Cagra.7053s0004 Capsella grandiflora Cagra.7053s0004 N 0.844
Carubv10023707m.g Capsella rubella Carubv10023707m.g N 0.844
cassava37862.valid.m1 Manihot esculenta cassava37862.valid.m1 I 0.894
Ca_13402 Cicer arietinum Ca_13402 I 0.894
chr2.CM0002.120.nc Lotus japonicus chr2.CM0002.120.nc I 0.883
Ciclev10032356m.g Citrus clementina Ciclev10032356m.g I 0.894
Cla006707 Citrullus lanatus Cla006707 I 0.894
Cucsa.136730 Cucumis sativus Cucsa.136730 I 0.894
Eucgr.J00190 Eucalyptus grandis Eucgr.J00190 I 0.894
evm.TU.supercontig_19.156 Carica papaya evm.TU.supercontig_19.156 I 0.894
fgenesh2_kg.108__1__AT2G40200.1 Arabidopsis lyrata fgenesh2_kg.108__1__AT2G40200.1 I 0.866
fgenesh2_kg.4__2126__AT2G40200.1 Arabidopsis lyrata fgenesh2_kg.4__2126__AT2G40200.1 N 0.842
gene21000-v1.0-hybrid Fragaria vesca gene21000-v1.0-hybrid I 0.864
GLYMA02G42570 Glycine max GLYMA02G42570 I 0.852
GLYMA11G35480 Glycine max GLYMA11G35480 I 0.894
GLYMA18G02940 Glycine max GLYMA18G02940 I 0.894
Gorai.012G078100 Gossypium raimondii Gorai.012G078100 I 0.852
Lus10007502.g Linum usitatissimum Lus10007502.g I 0.894
Lus10028978.g Linum usitatissimum Lus10028978.g I 0.894
MTR_3g070970 Medicago truncatula MTR_3g070970 I 0.894
orange1.1g023629m.g Citrus sinensis orange1.1g023629m.g I 0.894
PGSC0003DMG400027725 Solanum tuberosum PGSC0003DMG400027725 I 0.852
PK01630.1 Cannabis sativa PK01630.1 D 0.894
Pm018950 Prunus mume Pm018950 I 0.894
POPTR_0008s07090 Populus trichocarpa POPTR_0008s07090 I 0.894
POPTR_0010s19400 Populus trichocarpa POPTR_0010s19400 I 0.892
PRUPE_ppa010134mg Prunus persica PRUPE_ppa010134mg I 0.894
SapurV1A.0061s0470 Salix purpurea SapurV1A.0061s0470 I 0.894
Solyc03g095980.2 Solanum lycopersicum Solyc03g095980.2 I 0.852
TCM_042475 Theobroma cacao TCM_042475 I 0.894
Thhalv10017126m.g Eutrema salsugineum Thhalv10017126m.g N 0.844
VIT_13s0067g01350 Vitis vinifera VIT_13s0067g01350 I 0.894