TMUE_s0036001100 (Trichuris muris)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 TMUE_s0036001100 T055301_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Fer1
M03620_2.00 		Drosophila melanogaster
VDCASCTGHY
RDCAGSTGHB		 SELEX
Nitta et al.(2015)
Fer1_1 		0.890 0.865
Fer1
M05990_2.00 		Drosophila melanogaster
HVCASMTGWCV
BGWCAKSTGBD		 B1H
Zhu et al.(2011)
Fer1_da_SANGER_10_FBgn0037475 		0.890 0.865
Fer1
M05991_2.00 		Drosophila melanogaster
WYRHCAGCTGACG
CGTCAGCTGDYRW		 B1H
Zhu et al.(2011)
Fer1_SANGER_5_FBgn0037475 		0.890 0.865
PTF1A
M04156_2.00 		Homo sapiens
AACAGCTGACRB
VYGTCAGCTGTT		 SELEX
Yin et al.(2017)
PTF1A_eDBD_HT-SELEX 		0.870 0.808
PTF1A
M08736_2.00 		Homo sapiens
SCAGCTGBYNBNNYYYHN
NDRRRNNVNRVCAGCTGS		 Misc
Kulakovskiy et al.(2013)
PTF1A_HUMAN.H11MO.0.B 		0.870 0.808
Ptf1a
M08757_2.00 		Mus musculus
SCAGCTGBYNBNNYYYHN
NDRRRNNVNRVCAGCTGS		 Misc
Kulakovskiy et al.(2013)
PTF1A_MOUSE.H11MO.0.A 		0.870 0.808
Ptf1a
M09470_2.00 		Mus musculus
NVVCASSTGB
VCASSTGBBN		 Misc
Heinz et al.(2010)
Panc1-Ptf1a_GSE47459 		0.870 0.808
PTF1A
M04157_2.00 		Homo sapiens
AMCAGCTGACRB
VYGTCAGCTGKT		 SELEX
Yin et al.(2017)
PTF1A_eDBD_Methyl-HT-SELEX 		0.870 0.808
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TMUE_s0036001100 bHLH 151 203

Links

Other bHLH family TFs
Other Trichuris muris TFs

126 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29693.m002060 Ricinus communis 29693.m002060 I
30064.m000506 Ricinus communis 30064.m000506 I
30076.m004623 Ricinus communis 30076.m004623 I
30147.m014087 Ricinus communis 30147.m014087 I
AAEL008660 Aedes aegypti AAEL008660 I 0.890
AALB002674 Anopheles albimanus AALB002674 I 0.890
AARA001906 Anopheles arabiensis AARA001906 I 0.890
AATE014019 Anopheles atroparvus AATE014019 I 0.890
ACHR004799 Anopheles christyi ACHR004799 I 0.890
ACOM034154 Anopheles coluzzii ACOM034154 I 0.890
ACUA004590 Anopheles culicifacies ACUA004590 I 0.890
ACYPI37626 Acyrthosiphon pisum ACYPI37626 I 0.890
ADAC008497 Anopheles darlingi ADAC008497 I 0.890
ADIR010545 Anopheles dirus ADIR010545 I 0.890
AEPI006242 Anopheles epiroticus AEPI006242 I 0.890
AFAF002909 Anopheles farauti AFAF002909 I 0.890
AFUN008310 Anopheles funestus AFUN008310 I 0.890
AGAP001448 Anopheles gambiae AGAP001448 I 0.890
AMAM018725 Anopheles maculatus AMAM018725 I 0.890
AMEC009154 Anopheles melas AMEC009154 I 0.890
AMEM011331 Anopheles merus AMEM011331 I 0.890
AMIN003266 Anopheles minimus AMIN003266 I 0.890
AQUA006634 Anopheles quadriannulatus AQUA006634 I 0.890
ASIS019386 Anopheles sinensis ASIS019386 I 0.890
BGLB003958 Biomphalaria glabrata BGLB003958 I 0.870
Bo4g092630 Brassica oleracea Bo4g092630 I
Bo5g061050 Brassica oleracea Bo5g061050 I
Bo7g044930 Brassica oleracea Bo7g044930 I
CapteG59283 Capitella teleta CapteG59283 I 0.866
cassava33018.m1 Manihot esculenta cassava33018.m1 I
cassava36063.valid.m1 Manihot esculenta cassava36063.valid.m1 I
cassava40330.m1 Manihot esculenta cassava40330.m1 I
cassava9760.m1 Manihot esculenta cassava9760.m1 I
Ca_15343 Cicer arietinum Ca_15343 I
CGI_10017809 Crassostrea gigas CGI_10017809 I 0.890
Ciclev10005203m.g Citrus clementina Ciclev10005203m.g I
Ciclev10018230m.g Citrus clementina Ciclev10018230m.g I
CLEC012470 Cimex lectularius CLEC012470 I 0.890
CPIJ006258 Culex quinquefasciatus CPIJ006258 I 0.890
CpipJ_CPIJ006258 Culex pipiens CpipJ_CPIJ006258 I 0.890
csin111295 Clonorchis sinensis csin111295 I 0.894
D915_00775 Fasciola hepatica D915_00775 I 0.894
D917_00545 Trichinella nativa D917_00545 I 0.894
D918_01499 Trichuris suis D918_01499 I 0.914
DAPPUDRAFT_18360 Daphnia pulex DAPPUDRAFT_18360 I 0.870
DILT_0001058801 Diphyllobothrium latum DILT_0001058801 I 0.881
ECANG7_07852 Echinococcus canadensis ECANG7_07852 I 0.870
ECPE_0000418201 Echinostoma caproni ECPE_0000418201 I 0.894
EFV58245 Trichinella spiralis EFV58245 I 0.894
EmuJ_000998300 Echinococcus multilocularis EmuJ_000998300 I 0.870
ENSAMEG00000006374 Ailuropoda melanoleuca ENSAMEG00000006374 I 0.870
ENSAMXG00000008222 Astyanax mexicanus ENSAMXG00000008222 I 0.870
ENSCSAG00000012422 Chlorocebus sabaeus ENSCSAG00000012422 I 0.870
ENSFALG00000007280 Ficedula albicollis ENSFALG00000007280 I 0.870
ENSGMOG00000016849 Gadus morhua ENSGMOG00000016849 I 0.870
ENSLACG00000013727 Latimeria chalumnae ENSLACG00000013727 I 0.870
ENSLOCG00000003186 Lepisosteus oculatus ENSLOCG00000003186 I 0.870
ENSMEUG00000004292 Macropus eugenii ENSMEUG00000004292 I 0.870
ENSNLEG00000012897 Nomascus leucogenys ENSNLEG00000012897 I 0.870
ENSONIG00000016978 Oreochromis niloticus ENSONIG00000016978 I 0.870
ENSPANG00000023093 Papio anubis ENSPANG00000023093 I 0.870
ENSPFOG00000002486 Poecilia formosa ENSPFOG00000002486 I 0.870
ENSPMAG00000003727 Petromyzon marinus ENSPMAG00000003727 I 0.870
ENSPPYG00000002150 Pongo abelii ENSPPYG00000002150 I 0.870
ENSPSIG00000007810 Pelodiscus sinensis ENSPSIG00000007810 I 0.870
ENSPVAG00000013738 Pteropus vampyrus ENSPVAG00000013738 I 0.870
ENSSTOG00000022679 Ictidomys tridecemlineatus ENSSTOG00000022679 I 0.870
ENSTGUG00000001180 Taeniopygia guttata ENSTGUG00000001180 I 0.870
ENSXMAG00000015151 Xiphophorus maculatus ENSXMAG00000015151 I 0.870
estExt_fgenesh2_pg.C_640081 Branchiostoma floridae estExt_fgenesh2_pg.C_640081 I 0.870
estExt_GenewiseH_1.C_3210010 Branchiostoma floridae estExt_GenewiseH_1.C_3210010 I 0.870
estExt_GenewiseH_1.C_3210011 Branchiostoma floridae estExt_GenewiseH_1.C_3210011 I 0.870
Eucgr.D00336 Eucalyptus grandis Eucgr.D00336 I
evm.TU.supercontig_12.196 Carica papaya evm.TU.supercontig_12.196 I
Fer1 Drosophila melanogaster FBgn0037475 D 0.890
GA27498 Drosophila pseudoobscura FBgn0248864 I 0.890
GD19915 Drosophila simulans FBgn0191398 I 0.890
GE24907 Drosophila yakuba FBgn0242002 I 0.890
gene05066-v1.0-hybrid Fragaria vesca gene05066-v1.0-hybrid I
gene24904-v1.0-hybrid Fragaria vesca gene24904-v1.0-hybrid I
GF17655 Drosophila ananassae FBgn0094673 I 0.890
GG13863 Drosophila erecta FBgn0106126 I 0.890
GH19006 Drosophila grimshawi FBgn0126473 I 0.890
GI23061 Drosophila mojavensis FBgn0145788 I 0.890
GJ24574 Drosophila virilis FBgn0211653 I 0.890
GK14521 Drosophila willistoni FBgn0216527 I 0.890
GL12422 Drosophila persimilis FBgn0150028 I 0.890
GLYMA02G01420 Glycine max GLYMA02G01420 I
GLYMA03G37940 Glycine max GLYMA03G37940 I
GLYMA03G38360 Glycine max GLYMA03G38360 I
GLYMA07G36640 Glycine max GLYMA07G36640 I
GLYMA09G03900 Glycine max GLYMA09G03900 I
GLYMA10G01450 Glycine max GLYMA10G01450 I
GLYMA14G12290 Glycine max GLYMA14G12290 I
GLYMA15G14860 Glycine max GLYMA15G14860 I
GLYMA17G03950 Glycine max GLYMA17G03950 I
GLYMA19G40560 Glycine max GLYMA19G40560 I
GM10936 Drosophila sechellia FBgn0165881 I 0.890
Gorai.009G157300 Gossypium raimondii Gorai.009G157300 I
Gorai.010G164700 Gossypium raimondii Gorai.010G164700 I
Gorai.011G041400 Gossypium raimondii Gorai.011G041400 I
Gorai.011G201800 Gossypium raimondii Gorai.011G201800 I
Gorai.012G040700 Gossypium raimondii Gorai.012G040700 I
GSMUA_Achr10G30080_001 Musa acuminata GSMUA_Achr10G30080_001 I
GSMUA_Achr3G31310_001 Musa acuminata GSMUA_Achr3G31310_001 I
gw1.1.699.1 Chlorella vulgaris gw1.1.699.1 I
gw1.13.215.1 Physcomitrella patens gw1.13.215.1 I
gw1.47.186.1 Physcomitrella patens gw1.47.186.1 I
HelroG86431 Helobdella robusta HelroG86431 I 0.890
HmN_000218700 Hymenolepis microstoma HmN_000218700 I 0.870
ISCW003737 Ixodes scapularis ISCW003737 I 0.870
KGM_14030 Danaus plexippus KGM_14030 I 0.870
L798_11980 Zootermopsis nevadensis L798_11980 I 0.870
LCUP002382 Lucilia cuprina LCUP002382 I 0.890
LDEC016362 Leptinotarsa decemlineata LDEC016362 I 0.870
LjSGA_069579.1 Lotus japonicus LjSGA_069579.1 I
LLOJ003726 Lutzomyia longipalpis LLOJ003726 I 0.890
LLOJ004204 Lutzomyia longipalpis LLOJ004204 I 0.890
LLOJ005004 Lutzomyia longipalpis LLOJ005004 I 0.890
LotgiG66849 Lottia gigantea LotgiG66849 I 0.870
LPERR01G17870 Leersia perrieri LPERR01G17870 I
Lus10004537.g Linum usitatissimum Lus10004537.g I
Lus10038028.g Linum usitatissimum Lus10038028.g I
MCOS_0000879301 Mesocestoides corti MCOS_0000879301 I 0.870
MDOA013156 Musca domestica MDOA013156 I 0.890
MDP0000119590 Malus domestica MDP0000119590 I
MDP0000127976 Malus domestica MDP0000127976 I
MDP0000134105 Malus domestica MDP0000134105 I
MDP0000146390 Malus domestica MDP0000146390 I
MDP0000179719 Malus domestica MDP0000179719 I
MDP0000652760 Malus domestica MDP0000652760 I
MESCA008421 Megaselia scalaris MESCA008421 I 0.890
mgf013102m Mimulus guttatus mgf013102m I
mgf020798m Mimulus guttatus mgf020798m I
MTR_1g086790 Medicago truncatula MTR_1g086790 I
NEMVEDRAFT_v1g97005 Nematostella vectensis NEMVEDRAFT_v1g97005 I 0.890
Ocbimv22012139m.g Octopus bimaculoides Ocbimv22012139m.g I 0.890
OLONG_003355 Oryza longistaminata OLONG_003355 I
orange1.1g017479m.g Citrus sinensis orange1.1g017479m.g I
orange1.1g021142m.g Citrus sinensis orange1.1g021142m.g I
Pavir.Da02223 Panicum virgatum Pavir.Da02223 I
Pavir.Ea02224 Panicum virgatum Pavir.Ea02224 I
Pavir.Eb01898 Panicum virgatum Pavir.Eb01898 I
PHUM498120 Pediculus humanus PHUM498120 I 0.870
Pm008389 Prunus mume Pm008389 I
Pm010302 Prunus mume Pm010302 I
Pm012933 Prunus mume Pm012933 I
POPTR_0001s21580 Populus trichocarpa POPTR_0001s21580 I
POPTR_0001s34520 Populus trichocarpa POPTR_0001s34520 I
POPTR_0002s19390 Populus trichocarpa POPTR_0002s19390 I
POPTR_0008s10280 Populus trichocarpa POPTR_0008s10280 I
PPAI005132 Phlebotomus papatasi PPAI005132 I 0.890
PRUPE_ppa006909mg Prunus persica PRUPE_ppa006909mg I
PRUPE_ppa008731mg Prunus persica PRUPE_ppa008731mg I
PRUPE_ppa024027mg Prunus persica PRUPE_ppa024027mg I
PTF1A Anolis carolinensis ENSACAG00000008717 I 0.869
PTF1A Bos taurus ENSBTAG00000047315 I 0.870
PTF1A Callithrix jacchus ENSCJAG00000007862 I 0.870
PTF1A Cavia porcellus ENSCPOG00000022828 I 0.870
ptf1a Danio rerio ENSDARG00000014479 I 0.870
PTF1A Dasypus novemcinctus ENSDNOG00000035978 I 0.870
PTF1A Equus caballus ENSECAG00000012711 I 0.870
PTF1A Homo sapiens ENSG00000168267 D 0.870
ptf1a Gasterosteus aculeatus ENSGACG00000014760 I 0.870
PTF1A Gorilla gorilla ENSGGOG00000015210 I 0.870
PTF1A Loxodonta africana ENSLAFG00000012682 I 0.870
PTF1A Myotis lucifugus ENSMLUG00000010122 I 0.870
PTF1A Monodelphis domestica ENSMODG00000008946 I 0.870
Ptf1a Mus musculus ENSMUSG00000026735 D 0.870
PTF1A Otolemur garnettii ENSOGAG00000024685 I 0.870
ptf1a Oryzias latipes ENSORLG00000008277 I 0.870
PTF1A Procavia capensis ENSPCAG00000005440 I 0.870
Ptf1a Rattus norvegicus ENSRNOG00000016902 I 0.870
PTF1A Sus scrofa ENSSSCG00000030662 I 0.870
ptf1a Takifugu rubripes ENSTRUG00000007713 I 0.870
PTF1A Tursiops truncatus ENSTTRG00000016843 I 0.870
ptf1a Xenopus tropicalis XB-GENE-484425 I 0.870
ptf1a.S Xenopus laevis XB-GENE-6466546 I 0.870
Pvit_04136 Pogona vitticeps Pvit_04136 I 0.870
RPRC001881 Rhodnius prolixus RPRC001881 I 0.890
Sakowv30041452m.g Saccoglossus kowalevskii Sakowv30041452m.g I 0.890
SapurV1A.0014s0030 Salix purpurea SapurV1A.0014s0030 I
SapurV1A.0050s0250 Salix purpurea SapurV1A.0050s0250 I
SapurV1A.0114s0240 Salix purpurea SapurV1A.0114s0240 I
SapurV1A.0126s0010 Salix purpurea SapurV1A.0126s0010 I
SapurV1A.0158s0010 Salix purpurea SapurV1A.0158s0010 I
SapurV1A.0180s0110 Salix purpurea SapurV1A.0180s0110 I
SapurV1A.0297s0040 Salix purpurea SapurV1A.0297s0040 I
SapurV1A.1018s0090 Salix purpurea SapurV1A.1018s0090 I
Sb03g028530 Sorghum bicolor Sb03g028530 I
SBAD_0000858001 Soboliphyme baturini SBAD_0000858001 I 0.892
Si002019m.g Setaria italica Si002019m.g I
SMAR009985 Strigamia maritima SMAR009985 I 0.870
SMAR011911 Strigamia maritima SMAR011911 I 0.870
SMU15024587 Schmidtea mediterranea SMU15024587 I 0.914
SMU15028020 Schmidtea mediterranea SMU15028020 I 0.914
SMU15033768 Schmidtea mediterranea SMU15033768 I 0.849
SPU_002677 Strongylocentrotus purpuratus SPU_002677 I 0.846
SROB_0001629701 Schistosoma rodhaini SROB_0001629701 I 0.894
T265_12589 Opisthorchis viverrini T265_12589 I 0.894
TC014105 Tribolium castaneum TC014105 I 0.870
TCM_004843 Theobroma cacao TCM_004843 I
TCM_029543 Theobroma cacao TCM_029543 I
TRAES3BF021100090CFD_g Triticum aestivum TRAES3BF021100090CFD_g I
TRAES3BF021300010CFD_g Triticum aestivum TRAES3BF021300010CFD_g I
Traes_3AL_140B829CB Triticum aestivum Traes_3AL_140B829CB I
Traes_7AS_C9DF68E53 Triticum aestivum Traes_7AS_C9DF68E53 I
TRIUR3_03043 Triticum urartu TRIUR3_03043 I
TRIUR3_35037 Triticum urartu TRIUR3_35037 I
TTRE_0000022101 Trichuris trichiura TTRE_0000022101 I 0.914
VIT_12s0028g00270 Vitis vinifera VIT_12s0028g00270 I
VIT_19s0090g00840 Vitis vinifera VIT_19s0090g00840 I
XM_002320931.1 Populus trichocarpa POPTR_0014s11350 I
YQE_02105 Dendroctonus ponderosae YQE_02105 I 0.870