Bra031541 (Brassica rapa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 Bra031541 T057502_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AtbZIP52
M06746_2.00 		Arabidopsis thaliana
DTGMCAGCYBDNHH
DDNHVRGCTGKCAH		 Dap-seq
OMalley et al.(2016)
bZIP52_colamp_a 		0.846 0.984
AtbZIP52
M06747_2.00 		Arabidopsis thaliana
DTGMCAGCYKDNHN
NDNHMRGCTGKCAH		 Dap-seq
OMalley et al.(2016)
bZIP52_col_v31 		0.846 0.984
PK16335.1
M01157_2.00 		Cannabis sativa
NNNNKACAGCTRN
NYAGCTGTMNNNN		 PBM
Lambert et al.(2019)
pTH10187 		0.832 0.935
PK00315.1
M01153_2.00 		Cannabis sativa
NNGACAGCTRN
NYAGCTGTCNN		 PBM
Lambert et al.(2019)
pTH10085 		0.832 0.919
BZIP18
M01777_2.00 		Arabidopsis thaliana
NDMCARNHNN
NNDNYTGKHN		 PBM
Weirauch et al.(2014)
pTH7316 		0.817 0.887
BZIP18
M06768_2.00 		Arabidopsis thaliana
DTGMCAGCTDD
HHAGCTGKCAH		 Dap-seq
OMalley et al.(2016)
bZIP18_colamp_a 		0.817 0.887
BZIP18
M06769_2.00 		Arabidopsis thaliana
TGMCAGCTKKN
NMMAGCTGKCA		 Dap-seq
OMalley et al.(2016)
bZIP18_col_v31 		0.817 0.887
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra031541.1-P bZIP 130 191

Links

Other bZIP family TFs
Other Brassica rapa TFs

125 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27940.m000323 Ricinus communis 27940.m000323 I
AMTR_s00008p00092930 Amborella trichopoda AMTR_s00008p00092930 I
Aquca_053_00062 Aquilegia coerulea Aquca_053_00062 I
Aquca_082_00024 Aquilegia coerulea Aquca_082_00024 I
Bo1g017650 Brassica oleracea Bo1g017650 I
Bo2g132210 Brassica oleracea Bo2g132210 I
Bo7g077300 Brassica oleracea Bo7g077300 I
Bo8g049560 Brassica oleracea Bo8g049560 I
Bo9g069320 Brassica oleracea Bo9g069320 I
Bostr.28243s0001 Boechera stricta Bostr.28243s0001 I
Bostr.30275s0218 Boechera stricta Bostr.30275s0218 I
Bra017500 Brassica rapa Bra017500 I
Bra017501 Brassica rapa Bra017501 I
Bra021041 Brassica rapa Bra021041 I
Bra022107 Brassica rapa Bra022107 I
Bra024961 Brassica rapa Bra024961 I
Bra040167 Brassica rapa Bra040167 I
BRADI5G17370 Brachypodium distachyon BRADI5G17370 I
Cagra.3356s0048 Capsella grandiflora Cagra.3356s0048 I
Cagra.3675s0017 Capsella grandiflora Cagra.3675s0017 I
Carubv10007115m.g Capsella rubella Carubv10007115m.g I
Carubv10026597m.g Capsella rubella Carubv10026597m.g I
cassava42719.valid.m1 Manihot esculenta cassava42719.valid.m1 I
Ca_02313 Cicer arietinum Ca_02313 I
Ciclev10019614m.g Citrus clementina Ciclev10019614m.g I
estExt_fgenesh1_pg.C_1220019 Physcomitrella patens estExt_fgenesh1_pg.C_1220019 I
estExt_fgenesh1_pg.C_4100005 Physcomitrella patens estExt_fgenesh1_pg.C_4100005 I
Eucgr.D02129 Eucalyptus grandis Eucgr.D02129 I
Eucgr.E00364 Eucalyptus grandis Eucgr.E00364 I
evm.TU.supercontig_74.95 Carica papaya evm.TU.supercontig_74.95 I
F775_19309 Aegilops tauschii F775_19309 I
GATA26 Arabidopsis thaliana AT4G17570 D
GATA26 Arabidopsis lyrata fgenesh2_kg.7__2553__AT4G17570.1 I
GATA27 Arabidopsis thaliana AT5G47140 D
GLYMA01G41370 Glycine max GLYMA01G41370 I
GLYMA05G05320 Glycine max GLYMA05G05320 I
GLYMA11G04060 Glycine max GLYMA11G04060 I
GLYMA17G15610 Glycine max GLYMA17G15610 I
Gorai.003G177500 Gossypium raimondii Gorai.003G177500 I
Gorai.004G193200 Gossypium raimondii Gorai.004G193200 I
Gorai.006G214400 Gossypium raimondii Gorai.006G214400 I
Gorai.008G231500 Gossypium raimondii Gorai.008G231500 I
GSMUA_Achr11G17690_001 Musa acuminata GSMUA_Achr11G17690_001 I
GSMUA_Achr11G23110_001 Musa acuminata GSMUA_Achr11G23110_001 I
GSMUA_Achr2G18310_001 Musa acuminata GSMUA_Achr2G18310_001 I
GSMUA_Achr5G18290_001 Musa acuminata GSMUA_Achr5G18290_001 I
GSMUA_Achr8G15000_001 Musa acuminata GSMUA_Achr8G15000_001 I
LjSGA_060304.1 Lotus japonicus LjSGA_060304.1 I
Lus10000587.g Linum usitatissimum Lus10000587.g I
Lus10011008.g Linum usitatissimum Lus10011008.g I
Lus10011010.g Linum usitatissimum Lus10011010.g I
MDP0000129092 Malus domestica MDP0000129092 I
mgf015364m Mimulus guttatus mgf015364m I
mgf016271m Mimulus guttatus mgf016271m I
mgf024972m Mimulus guttatus mgf024972m I
MLOC_15510 Hordeum vulgare MLOC_15510 I
orange1.1g009155m.g Citrus sinensis orange1.1g009155m.g I
PGSC0003DMG400023781 Solanum tuberosum PGSC0003DMG400023781 I
PK11095.1 Cannabis sativa PK11095.1 I
POPTR_0001s15170 Populus trichocarpa POPTR_0001s15170 I
POPTR_0003s08080 Populus trichocarpa POPTR_0003s08080 I
SapurV1A.0107s0250 Salix purpurea SapurV1A.0107s0250 I
SapurV1A.0201s0160 Salix purpurea SapurV1A.0201s0160 I
TCM_015870 Theobroma cacao TCM_015870 I
Thhalv10000871m.g Eutrema salsugineum Thhalv10000871m.g I
Thhalv10024940m.g Eutrema salsugineum Thhalv10024940m.g I
Traes_2AL_01E6C08C0 Triticum aestivum Traes_2AL_01E6C08C0 I
Traes_2BL_4575D095D Triticum aestivum Traes_2BL_4575D095D I
Traes_2DL_C46B73FA3 Triticum aestivum Traes_2DL_C46B73FA3 I