POPTR_0005s05470 (Populus trichocarpa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 POPTR_0005s05470 T066951_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CPRF2_PETCR
M10069_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF2_01 		0.814 0.833
CPRF2_PETCR
M10070_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF2_Q2 		0.814 0.833
estExt_Genewise1.C_2060077
M01832_2.00 		Physcomitrella patens
NNHSACGTGKNN
NNMCACGTSDNN		 PBM
Weirauch et al.(2014)
pTH8666 		0.804 0.733
BZIP63
M01787_2.00 		Arabidopsis thaliana
NNNWSACGTGKN
NMCACGTSWNNN		 PBM
Weirauch et al.(2014)
pTH7300 		0.794 0.700
PK05128.1
M01154_2.00 		Cannabis sativa
NNNDBGTRKN
NMYACVHNNN		 PBM
Lambert et al.(2019)
pTH10099 		0.787 0.867
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0005s05470.1 bZIP 177 236

Links

Other bZIP family TFs
Other Populus trichocarpa TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Eucgr.B03693 Eucalyptus grandis Eucgr.B03693 N 0.000
Eucgr.B03703 Eucalyptus grandis Eucgr.B03703 N 0.000
Eucgr.L02674 Eucalyptus grandis Eucgr.L02674 N 0.000
Lus10042466.g Linum usitatissimum Lus10042466.g N 0.000
VIT_19s0027g00230 Vitis vinifera VIT_19s0027g00230 N 0.000