CPRF3_PETCR (Petroselinum crispum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 CPRF3_PETCR T070483_2.00 HughesLab (2013-Jun-13)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CPRF3_PETCR
M10071_2.00		 Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF3_01		 (Direct) (Direct)
CPRF3_PETCR
M10072_2.00		 Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF3_Q2		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BZIP16
M06764_2.00 		Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH		 Dap-seq
OMalley et al.(2016)
bZIP16_colamp_a 		0.809 0.609
BZIP16
M06765_2.00 		Arabidopsis thaliana
DDWKVHSACGTGGCA
TGCCACGTSDBMWHH		 Dap-seq
OMalley et al.(2016)
bZIP16_col_v3a 		0.809 0.609
CPRF1_PETCR
M10066_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF1_01 		0.805 0.516
CPRF1_PETCR
M10067_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF1_Q2 		0.805 0.516
CPRF1_PETCR
M10068_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF_Q2 		0.805 0.516
GBF1
M01783_2.00 		Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD		 PBM
Weirauch et al.(2014)
pTH7259 		0.797 0.656
GBF1
M09913_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_01 		0.797 0.656
GBF1
M09914_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1F_Q2 		0.797 0.656
GBF1
M09915_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_Q2_01 		0.797 0.656
GBF1
M09916_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_Q2 		0.797 0.656
PK09653.1
M01156_2.00 		Cannabis sativa
NNMCASVNNN
NNNBSTGKNN		 PBM
Lambert et al.(2019)
pTH10114 		0.797 0.531
TAF1_TOBAC
M10079_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TAF1_01 		0.797 0.531
TAF1_TOBAC
M10080_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TAF1_Q2 		0.797 0.531
Q40645_ORYSA
M10050_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$OSBZ8_Q6 		0.793 0.516
Q41109_PHAVU
M10078_2.00 		Phaseolus vulgaris Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ROM_Q2 		0.792 0.531
BZIP68
M01770_2.00 		Arabidopsis thaliana
BMCASGBND
HNVCSTGKV		 PBM
Weirauch et al.(2014)
pTH8192 		0.782 0.578
BZIP68
M06752_2.00 		Arabidopsis thaliana
DNWKNHSACGTGGCR
YGCCACGTSDNMWNH		 Dap-seq
OMalley et al.(2016)
bZIP68_col_a 		0.782 0.578
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CPRF3_PETCR bZIP 194 262

Links

Other bZIP family TFs
Other Petroselinum crispum TFs

168 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30174.m008698 Ricinus communis 30174.m008698 I 0.797
AMTR_s00059p00094730 Amborella trichopoda AMTR_s00059p00094730 I 0.820
Aquca_002_01218 Aquilegia coerulea Aquca_002_01218 I 0.797
Aquca_013_00209 Aquilegia coerulea Aquca_013_00209 I 0.790
Aquca_037_00034 Aquilegia coerulea Aquca_037_00034 I 0.795
BGIOSGA001085 Oryza indica BGIOSGA001085 I 0.793
BGIOSGA020389 Oryza indica BGIOSGA020389 I 0.793
Bo4g038560 Brassica oleracea Bo4g038560 I 0.813
Bo9g003700 Brassica oleracea Bo9g003700 I 0.784
Bostr.23794s0549 Boechera stricta Bostr.23794s0549 I 0.809
Bostr.3359s0141 Boechera stricta Bostr.3359s0141 I 0.786
Bostr.7365s0064 Boechera stricta Bostr.7365s0064 I 0.785
Bostr.7867s1529 Boechera stricta Bostr.7867s1529 I 0.797
Bra005335 Brassica rapa Bra005335 I 0.817
Bra010572 Brassica rapa Bra010572 I 0.785
Bra037382 Brassica rapa Bra037382 I 0.784
BRADI2G15940 Brachypodium distachyon BRADI2G15940 I 0.786
BRADI2G45567 Brachypodium distachyon BRADI2G45567 I 0.793
BZIP16 Arabidopsis thaliana AT2G35530 D 0.809
BZIP68 Arabidopsis thaliana AT1G32150 D 0.782
bZIP68 Arabidopsis lyrata fgenesh2_kg.1__3350__AT1G32150.1 I 0.782
Cagra.0993s0063 Capsella grandiflora Cagra.0993s0063 I 0.790
Cagra.1372s0011 Capsella grandiflora Cagra.1372s0011 I 0.785
Cagra.3359s0011 Capsella grandiflora Cagra.3359s0011 I 0.782
Cagra.5996s0003 Capsella grandiflora Cagra.5996s0003 I 0.797
Carubv10001247m.g Capsella rubella Carubv10001247m.g I 0.785
Carubv10005287m.g Capsella rubella Carubv10005287m.g I 0.797
cassava29861.valid.m1 Manihot esculenta cassava29861.valid.m1 I 0.790
cassava29862.valid.m1 Manihot esculenta cassava29862.valid.m1 I 0.790
cassava43569.valid.m1 Manihot esculenta cassava43569.valid.m1 I 0.808
cassava43570.valid.m1 Manihot esculenta cassava43570.valid.m1 I 0.808
cassava43571.valid.m1 Manihot esculenta cassava43571.valid.m1 I 0.808
cassava46468.m1 Manihot esculenta cassava46468.m1 I 0.808
Ca_01293 Cicer arietinum Ca_01293 I 0.792
Ca_15839 Cicer arietinum Ca_15839 I 0.782
Ca_17787 Cicer arietinum Ca_17787 I 0.783
chr1.CM0579.280.nd Lotus japonicus chr1.CM0579.280.nd I 0.797
Ciclev10020314m.g Citrus clementina Ciclev10020314m.g I 0.783
Ciclev10025963m.g Citrus clementina Ciclev10025963m.g I 0.824
Cla014415 Citrullus lanatus Cla014415 I 0.822
Cla021500 Citrullus lanatus Cla021500 I 0.787
CPRF1_PETCR Petroselinum crispum CPRF1_PETCR D 0.805
Cucsa.104970 Cucumis sativus Cucsa.104970 I 0.822
Cucsa.258940 Cucumis sativus Cucsa.258940 I 0.787
estExt_fgenesh1_pg.C_10522 Micromonas pusilla estExt_fgenesh1_pg.C_10522 I 0.791
estExt_fgenesh2_pg.C_Chr_020452 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_020452 I 0.793
Eucgr.E00078 Eucalyptus grandis Eucgr.E00078 I 0.807
Eucgr.H01256 Eucalyptus grandis Eucgr.H01256 I 0.812
evm.TU.supercontig_158.7 Carica papaya evm.TU.supercontig_158.7 I 0.814
F775_07803 Aegilops tauschii F775_07803 I 0.789
GBF1 Arabidopsis thaliana AT4G36730 D 0.797
GBF1 Arabidopsis lyrata scaffold_700433.1 I 0.797
GBF1 Vitis vinifera VIT_04s0023g01360 I 0.832
GBF2 Arabidopsis lyrata Al_scaffold_0006_3899 I 0.783
gene13716-v1.0-hybrid Fragaria vesca gene13716-v1.0-hybrid I 0.783
gene18928-v1.0-hybrid Fragaria vesca gene18928-v1.0-hybrid I 0.785
gene29546-v1.0-hybrid Fragaria vesca gene29546-v1.0-hybrid I 0.785
GLYMA01G01740 Glycine max GLYMA01G01740 I 0.784
GLYMA01G38381 Glycine max GLYMA01G38381 I 0.823
GLYMA02G06550 Glycine max GLYMA02G06550 I 0.818
GLYMA03G41590 Glycine max GLYMA03G41590 I 0.797
GLYMA07G06620 Glycine max GLYMA07G06620 I 0.791
GLYMA08G34280 Glycine max GLYMA08G34280 I 0.783
GLYMA16G03190 Glycine max GLYMA16G03190 I 0.792
GLYMA16G25600 Glycine max GLYMA16G25600 I 0.818
GLYMA19G44190 Glycine max GLYMA19G44190 I 0.797
Gorai.004G153100 Gossypium raimondii Gorai.004G153100 I 0.797
Gorai.007G105100 Gossypium raimondii Gorai.007G105100 I 0.797
Gorai.007G205700 Gossypium raimondii Gorai.007G205700 I 0.801
Gorai.008G068900 Gossypium raimondii Gorai.008G068900 I 0.818
Gorai.008G123200 Gossypium raimondii Gorai.008G123200 I 0.797
GRMZM2G011932 Zea mays GRMZM2G011932 I 0.792
GRMZM2G117851 Zea mays GRMZM2G117851 I 0.793
GRMZM2G160136 Zea mays GRMZM2G160136 I 0.792
GRMZM2G358701 Zea mays GRMZM2G358701 I 0.792
GRMZM5G848942 Zea mays GRMZM5G848942 I 0.792
GSMUA_Achr1G05050_001 Musa acuminata GSMUA_Achr1G05050_001 I 0.796
GSMUA_Achr6G32000_001 Musa acuminata GSMUA_Achr6G32000_001 I 0.792
GSMUA_Achr9G05310_001 Musa acuminata GSMUA_Achr9G05310_001 I 0.789
gw2.11.550.1 Micromonas sp RCC299 gw2.11.550.1 I 0.784
LPERR01G21580 Leersia perrieri LPERR01G21580 I 0.793
LPERR05G21930 Leersia perrieri LPERR05G21930 I 0.793
Lus10003034.g Linum usitatissimum Lus10003034.g I 0.797
Lus10005146.g Linum usitatissimum Lus10005146.g I 0.797
MDP0000138052 Malus domestica MDP0000138052 I 0.807
MDP0000185553 Malus domestica MDP0000185553 I 0.783
MDP0000231274 Malus domestica MDP0000231274 I 0.826
MDP0000286846 Malus domestica MDP0000286846 I 0.783
MDP0000493795 Malus domestica MDP0000493795 I 0.807
MDP0000545420 Malus domestica MDP0000545420 I 0.807
mgf000639m Mimulus guttatus mgf000639m I 0.809
mgf003302m Mimulus guttatus mgf003302m I 0.797
mgf005151m Mimulus guttatus mgf005151m I 0.809
mgf008605m Mimulus guttatus mgf008605m I 0.782
mgf013423m Mimulus guttatus mgf013423m I 0.797
mgf014804m Mimulus guttatus mgf014804m I 0.809
MLOC_6711 Hordeum vulgare MLOC_6711 I 0.789
MTR_7g116890 Medicago truncatula MTR_7g116890 I 0.792
MTR_8g070820 Medicago truncatula MTR_8g070820 I 0.782
MTR_8g077950 Medicago truncatula MTR_8g077950 I 0.818
OB01G34490 Oryza brachyantha OB01G34490 I 0.793
OB05G33790 Oryza brachyantha OB05G33790 I 0.793
OBART01G25300 Oryza barthii OBART01G25300 I 0.793
OBART05G26280 Oryza barthii OBART05G26280 I 0.793
OGLUM01G29060 Oryza glumaepatula OGLUM01G29060 I 0.793
OGLUM05G27920 Oryza glumaepatula OGLUM05G27920 I 0.793
OLONG_003667 Oryza longistaminata OLONG_003667 I 0.793
OLONG_022047 Oryza longistaminata OLONG_022047 I 0.793
OMERI01G23000 Oryza meridionalis OMERI01G23000 I 0.793
OMERI03G30340 Oryza meridionalis OMERI03G30340 I 0.793
ONIVA01G28540 Oryza nivara ONIVA01G28540 I 0.793
ONIVA05G28290 Oryza nivara ONIVA05G28290 I 0.793
OPUNC01G25140 Oryza punctata OPUNC01G25140 I 0.793
OPUNC05G23850 Oryza punctata OPUNC05G23850 I 0.793
orange1.1g014660m.g Citrus sinensis orange1.1g014660m.g I 0.783
orange1.1g018605m.g Citrus sinensis orange1.1g018605m.g I 0.824
ORGLA01G0206000 Oryza glaberrima ORGLA01G0206000 I 0.793
ORGLA05G0227800 Oryza glaberrima ORGLA05G0227800 I 0.793
ORUFI01G28110 Oryza rufipogon ORUFI01G28110 I 0.793
ORUFI05G28170 Oryza rufipogon ORUFI05G28170 I 0.793
OS01G0658900 Oryza sativa OS01G0658900 I 0.793
OS05G0569300 Oryza sativa OS05G0569300 I 0.793
Pavir.Ea02315 Panicum virgatum Pavir.Ea02315 I 0.793
PDK_20s1349941g001 Phoenix dactylifera PDK_20s1349941g001 I 0.793
PDK_20s1372692g002 Phoenix dactylifera PDK_20s1372692g002 I 0.809
PDK_20s1708971g001 Phoenix dactylifera PDK_20s1708971g001 I 0.795
PGSC0003DMG400000088 Solanum tuberosum PGSC0003DMG400000088 I 0.788
PGSC0003DMG400012660 Solanum tuberosum PGSC0003DMG400012660 I 0.828
PGSC0003DMG400033876 Solanum tuberosum PGSC0003DMG400033876 I 0.797
PK09653.1 Cannabis sativa PK09653.1 D 0.797
Pm018422 Prunus mume Pm018422 I 0.807
Pm023132 Prunus mume Pm023132 I 0.783
Pm026586 Prunus mume Pm026586 I 0.822
POPTR_0002s16870 Populus trichocarpa POPTR_0002s16870 I 0.797
POPTR_0005s12750 Populus trichocarpa POPTR_0005s12750 I 0.788
POPTR_0007s12460 Populus trichocarpa POPTR_0007s12460 I 0.788
PRUPE_ppa006173mg Prunus persica PRUPE_ppa006173mg I 0.807
PRUPE_ppa006484mg Prunus persica PRUPE_ppa006484mg I 0.783
PRUPE_ppa008024mg Prunus persica PRUPE_ppa008024mg I 0.822
Q40645_ORYSA Oryza sativa Q40645_ORYSA D 0.793
Q41109_PHAVU Phaseolus vulgaris Q41109_PHAVU D 0.792
SapurV1A.0013s0770 Salix purpurea SapurV1A.0013s0770 I 0.797
SapurV1A.0255s0070 Salix purpurea SapurV1A.0255s0070 I 0.784
Sb03g030050 Sorghum bicolor Sb03g030050 I 0.791
Sb09g028990 Sorghum bicolor Sb09g028990 I 0.792
SELMODRAFT_125734 Selaginella moellendorffii SELMODRAFT_125734 I 0.803
SELMODRAFT_129391 Selaginella moellendorffii SELMODRAFT_129391 I 0.803
SELMODRAFT_135978 Selaginella moellendorffii SELMODRAFT_135978 I 0.791
Si001929m.g Setaria italica Si001929m.g I 0.793
Si022388m.g Setaria italica Si022388m.g I 0.792
Solyc01g095460.2 Solanum lycopersicum Solyc01g095460.2 I 0.788
Solyc02g062950.2 Solanum lycopersicum Solyc02g062950.2 I 0.819
Solyc02g085610.2 Solanum lycopersicum Solyc02g085610.2 I 0.828
Solyc05g050220.2 Solanum lycopersicum Solyc05g050220.2 I 0.797
TAF1_TOBAC Nicotiana tabacum TAF1_TOBAC D 0.797
TCM_000436 Theobroma cacao TCM_000436 I 0.810
TCM_005210 Theobroma cacao TCM_005210 I 0.797
Thhalv10007879m.g Eutrema salsugineum Thhalv10007879m.g I 0.782
Thhalv10016740m.g Eutrema salsugineum Thhalv10016740m.g I 0.804
Thhalv10025733m.g Eutrema salsugineum Thhalv10025733m.g I 0.785
Thhalv10028761m.g Eutrema salsugineum Thhalv10028761m.g I 0.784
Traes_1AL_F18EC96DF Triticum aestivum Traes_1AL_F18EC96DF I 0.789
Traes_1BL_C5FEAF06E Triticum aestivum Traes_1BL_C5FEAF06E I 0.789
Traes_1DL_23D036A85 Triticum aestivum Traes_1DL_23D036A85 I 0.789
TRIUR3_18341 Triticum urartu TRIUR3_18341 I 0.789
VIT_02s0025g01020 Vitis vinifera VIT_02s0025g01020 I 0.785
VIT_15s0046g01440 Vitis vinifera VIT_15s0046g01440 I 0.812
VIT_18s0001g12120 Vitis vinifera VIT_18s0001g12120 I 0.845