Cla021500 (Citrullus lanatus)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Cla021500 T070050_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK09653.1
M01156_2.00 		Cannabis sativa
NNMCASVNNN
NNNBSTGKNN		 PBM
Lambert et al.(2019)
pTH10114 		0.860 0.766
Q40645_ORYSA
M10050_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$OSBZ8_Q6 		0.850 0.797
Q41109_PHAVU
M10078_2.00 		Phaseolus vulgaris Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ROM_Q2 		0.849 0.781
GBF3
M01779_2.00 		Arabidopsis thaliana
NBMCASSTVD
HBASSTGKVN		 PBM
Weirauch et al.(2014)
pTH7328 		0.842 0.766
GBF3
M06770_2.00 		Arabidopsis thaliana
DNHDNHSACGTGKMD
HKMCACGTSDNHDNH		 Dap-seq
OMalley et al.(2016)
GBF3_colamp 		0.842 0.766
GBF3
M06771_2.00 		Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH		 Dap-seq
OMalley et al.(2016)
GBF3_col 		0.842 0.766
TAF1_TOBAC
M10079_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TAF1_01 		0.841 0.766
TAF1_TOBAC
M10080_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TAF1_Q2 		0.841 0.766
GBF2
M01781_2.00 		Arabidopsis thaliana
BMCASSNNN
NNNSSTGKV		 PBM
Weirauch et al.(2014)
pTH7258 		0.828 0.688
GBF1
M01783_2.00 		Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD		 PBM
Weirauch et al.(2014)
pTH7259 		0.823 0.641
GBF1
M09913_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_01 		0.823 0.641
GBF1
M09914_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1F_Q2 		0.823 0.641
GBF1
M09915_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_Q2_01 		0.823 0.641
GBF1
M09916_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_Q2 		0.823 0.641
CPRF1_PETCR
M10066_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF1_01 		0.807 0.734
CPRF1_PETCR
M10067_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF1_Q2 		0.807 0.734
CPRF1_PETCR
M10068_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF_Q2 		0.807 0.734
CPRF3_PETCR
M10071_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF3_01 		0.787 0.562
CPRF3_PETCR
M10072_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF3_Q2 		0.787 0.562
BZIP68
M01770_2.00 		Arabidopsis thaliana
BMCASGBND
HNVCSTGKV		 PBM
Weirauch et al.(2014)
pTH8192 		0.787 0.609
BZIP68
M06752_2.00 		Arabidopsis thaliana
DNWKNHSACGTGGCR
YGCCACGTSDNMWNH		 Dap-seq
OMalley et al.(2016)
bZIP68_col_a 		0.787 0.609
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla021500 bZIP 281 344

Links

Other bZIP family TFs
Other Citrullus lanatus TFs

221 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.258940 Cucumis sativus Cucsa.258940 I 0.885
PRUPE_ppa006173mg Prunus persica PRUPE_ppa006173mg I 0.862
Pm018422 Prunus mume Pm018422 I 0.862
MDP0000138052 Malus domestica MDP0000138052 I 0.861
MDP0000493795 Malus domestica MDP0000493795 I 0.861
MDP0000545420 Malus domestica MDP0000545420 I 0.861
Gorai.007G105100 Gossypium raimondii Gorai.007G105100 I 0.860
PK09653.1 Cannabis sativa PK09653.1 D 0.860
30174.m008698 Ricinus communis 30174.m008698 I 0.859
mgf003302m Mimulus guttatus mgf003302m I 0.859
mgf013423m Mimulus guttatus mgf013423m I 0.859
PGSC0003DMG400033876 Solanum tuberosum PGSC0003DMG400033876 I 0.856
Solyc05g050220.2 Solanum lycopersicum Solyc05g050220.2 I 0.856
cassava29861.valid.m1 Manihot esculenta cassava29861.valid.m1 I 0.854
cassava29862.valid.m1 Manihot esculenta cassava29862.valid.m1 I 0.854
BGIOSGA001085 Oryza indica BGIOSGA001085 I 0.850
GRMZM2G117851 Zea mays GRMZM2G117851 I 0.850
LPERR01G21580 Leersia perrieri LPERR01G21580 I 0.850
LPERR05G21930 Leersia perrieri LPERR05G21930 I 0.850
OB01G34490 Oryza brachyantha OB01G34490 I 0.850
OB05G33790 Oryza brachyantha OB05G33790 I 0.850
OBART01G25300 Oryza barthii OBART01G25300 I 0.850
OBART05G26280 Oryza barthii OBART05G26280 I 0.850
OGLUM01G29060 Oryza glumaepatula OGLUM01G29060 I 0.850
OGLUM05G27920 Oryza glumaepatula OGLUM05G27920 I 0.850
OLONG_003667 Oryza longistaminata OLONG_003667 I 0.850
OLONG_022047 Oryza longistaminata OLONG_022047 I 0.850
OMERI01G23000 Oryza meridionalis OMERI01G23000 I 0.850
OMERI03G30340 Oryza meridionalis OMERI03G30340 I 0.850
ONIVA01G28540 Oryza nivara ONIVA01G28540 I 0.850
OPUNC01G25140 Oryza punctata OPUNC01G25140 I 0.850
ORGLA01G0206000 Oryza glaberrima ORGLA01G0206000 I 0.850
ORGLA05G0227800 Oryza glaberrima ORGLA05G0227800 I 0.850
ORUFI01G28110 Oryza rufipogon ORUFI01G28110 I 0.850
ORUFI05G28170 Oryza rufipogon ORUFI05G28170 I 0.850
OS01G0658900 Oryza sativa OS01G0658900 I 0.850
OS05G0569300 Oryza sativa OS05G0569300 I 0.850
Q40645_ORYSA Oryza sativa Q40645_ORYSA D 0.850
Si001929m.g Setaria italica Si001929m.g I 0.850
GLYMA16G03190 Glycine max GLYMA16G03190 I 0.849
Q41109_PHAVU Phaseolus vulgaris Q41109_PHAVU D 0.849
Pavir.Ea02315 Panicum virgatum Pavir.Ea02315 I 0.849
BRADI2G45567 Brachypodium distachyon BRADI2G45567 I 0.848
Sb03g030050 Sorghum bicolor Sb03g030050 I 0.848
Sb09g028990 Sorghum bicolor Sb09g028990 I 0.848
Si022388m.g Setaria italica Si022388m.g I 0.848
Eucgr.E00078 Eucalyptus grandis Eucgr.E00078 I 0.848
GLYMA07G06620 Glycine max GLYMA07G06620 I 0.847
F775_07803 Aegilops tauschii F775_07803 I 0.846
MLOC_6711 Hordeum vulgare MLOC_6711 I 0.846
Traes_1AL_F18EC96DF Triticum aestivum Traes_1AL_F18EC96DF I 0.846
Traes_1BL_C5FEAF06E Triticum aestivum Traes_1BL_C5FEAF06E I 0.846
Traes_1DL_23D036A85 Triticum aestivum Traes_1DL_23D036A85 I 0.846
TRIUR3_18341 Triticum urartu TRIUR3_18341 I 0.846
cassava43569.valid.m1 Manihot esculenta cassava43569.valid.m1 I 0.846
cassava43570.valid.m1 Manihot esculenta cassava43570.valid.m1 I 0.846
cassava43571.valid.m1 Manihot esculenta cassava43571.valid.m1 I 0.846
cassava46468.m1 Manihot esculenta cassava46468.m1 I 0.846
TCM_005210 Theobroma cacao TCM_005210 I 0.845
Gorai.004G153100 Gossypium raimondii Gorai.004G153100 I 0.845
Gorai.008G123200 Gossypium raimondii Gorai.008G123200 I 0.845
BRADI2G15940 Brachypodium distachyon BRADI2G15940 I 0.844
POPTR_0002s16870 Populus trichocarpa POPTR_0002s16870 I 0.843
Lus10003034.g Linum usitatissimum Lus10003034.g I 0.843
Lus10005146.g Linum usitatissimum Lus10005146.g I 0.843
GBF3 Arabidopsis thaliana AT2G46270 D 0.842
Bo4g010410 Brassica oleracea Bo4g010410 I 0.842
Bra004550 Brassica rapa Bra004550 I 0.842
GBF3 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4002338 I 0.842
VIT_15s0046g01440 Vitis vinifera VIT_15s0046g01440 I 0.842
Cagra.0050s0071 Capsella grandiflora Cagra.0050s0071 I 0.842
Carubv10023434m.g Capsella rubella Carubv10023434m.g I 0.842
Thhalv10001533m.g Eutrema salsugineum Thhalv10001533m.g I 0.842
TAF1_TOBAC Nicotiana tabacum TAF1_TOBAC D 0.841
PDK_20s1349941g001 Phoenix dactylifera PDK_20s1349941g001 I 0.841
Bra010572 Brassica rapa Bra010572 I 0.836
Thhalv10025733m.g Eutrema salsugineum Thhalv10025733m.g I 0.836
BGIOSGA020389 Oryza indica BGIOSGA020389 I 0.833
ONIVA05G28290 Oryza nivara ONIVA05G28290 I 0.833
OPUNC05G23850 Oryza punctata OPUNC05G23850 I 0.833
PGSC0003DMG400000088 Solanum tuberosum PGSC0003DMG400000088 I 0.832
Solyc01g095460.2 Solanum lycopersicum Solyc01g095460.2 I 0.832
GRMZM2G011932 Zea mays GRMZM2G011932 I 0.831
GRMZM2G160136 Zea mays GRMZM2G160136 I 0.831
GRMZM2G358701 Zea mays GRMZM2G358701 I 0.831
GRMZM5G848942 Zea mays GRMZM5G848942 I 0.831
Pavir.Ca00968 Panicum virgatum Pavir.Ca00968 I 0.830
GBF2 Arabidopsis thaliana AT4G01120 D 0.828
GLYMA03G41590 Glycine max GLYMA03G41590 I 0.828
GLYMA19G44190 Glycine max GLYMA19G44190 I 0.828
Bo1g005460 Brassica oleracea Bo1g005460 I 0.827
Bra011701 Brassica rapa Bra011701 I 0.827
Bostr.7365s0064 Boechera stricta Bostr.7365s0064 I 0.827
Cagra.1372s0011 Capsella grandiflora Cagra.1372s0011 I 0.827
Carubv10001247m.g Capsella rubella Carubv10001247m.g I 0.827
Bo9g003700 Brassica oleracea Bo9g003700 I 0.826
Bra037382 Brassica rapa Bra037382 I 0.826
Thhalv10028761m.g Eutrema salsugineum Thhalv10028761m.g I 0.826
SapurV1A.0013s0770 Salix purpurea SapurV1A.0013s0770 I 0.825
GBF2 Arabidopsis lyrata Al_scaffold_0006_3899 I 0.824
Bo3g039150 Brassica oleracea Bo3g039150 I 0.824
Ca_17787 Cicer arietinum Ca_17787 I 0.824
gene18928-v1.0-hybrid Fragaria vesca gene18928-v1.0-hybrid I 0.824
Pavir.J01411 Panicum virgatum Pavir.J01411 I 0.824
chr1.CM0579.280.nd Lotus japonicus chr1.CM0579.280.nd I 0.824
GBF1 Arabidopsis thaliana AT4G36730 D 0.823
GBF1 Arabidopsis lyrata scaffold_700433.1 I 0.823
Bostr.7867s1529 Boechera stricta Bostr.7867s1529 I 0.823
Cagra.5996s0003 Capsella grandiflora Cagra.5996s0003 I 0.823
Carubv10005287m.g Capsella rubella Carubv10005287m.g I 0.823
GSMUA_Achr9G05310_001 Musa acuminata GSMUA_Achr9G05310_001 I 0.822
29646.m001068 Ricinus communis 29646.m001068 I 0.821
cassava45491.m1 Manihot esculenta cassava45491.m1 I 0.821
GSMUA_Achr6G32000_001 Musa acuminata GSMUA_Achr6G32000_001 I 0.817
Aquca_037_00034 Aquilegia coerulea Aquca_037_00034 I 0.816
MTR_7g116890 Medicago truncatula MTR_7g116890 I 0.813
VIT_02s0025g01020 Vitis vinifera VIT_02s0025g01020 I 0.813
Ca_01293 Cicer arietinum Ca_01293 I 0.813
SELMODRAFT_135978 Selaginella moellendorffii SELMODRAFT_135978 I 0.811
gw1.3.298.1 Physcomitrella patens gw1.3.298.1 I 0.810
Aquca_013_00209 Aquilegia coerulea Aquca_013_00209 I 0.810
Ciclev10020314m.g Citrus clementina Ciclev10020314m.g I 0.810
orange1.1g014660m.g Citrus sinensis orange1.1g014660m.g I 0.810
POPTR_0014s08990 Populus trichocarpa POPTR_0014s08990 I 0.809
GBF1 Vitis vinifera VIT_04s0023g01360 I 0.809
BGIOSGA025382 Oryza indica BGIOSGA025382 I 0.807
GRMZM2G095078 Zea mays GRMZM2G095078 I 0.807
GRMZM2G171370 Zea mays GRMZM2G171370 I 0.807
LPERR07G06120 Leersia perrieri LPERR07G06120 I 0.807
MTR_8g070820 Medicago truncatula MTR_8g070820 I 0.807
OB07G15280 Oryza brachyantha OB07G15280 I 0.807
OBART07G07070 Oryza barthii OBART07G07070 I 0.807
OGLUM07G06770 Oryza glumaepatula OGLUM07G06770 I 0.807
OLONG_021599 Oryza longistaminata OLONG_021599 I 0.807
OMERI07G05820 Oryza meridionalis OMERI07G05820 I 0.807
ONIVA07G05320 Oryza nivara ONIVA07G05320 I 0.807
OPUNC07G06790 Oryza punctata OPUNC07G06790 I 0.807
ORUFI07G07050 Oryza rufipogon ORUFI07G07050 I 0.807
OS07G0209800 Oryza sativa OS07G0209800 I 0.807
POPTR_0005s12750 Populus trichocarpa POPTR_0005s12750 I 0.807
POPTR_0007s12460 Populus trichocarpa POPTR_0007s12460 I 0.807
Sb02g006350 Sorghum bicolor Sb02g006350 I 0.807
Si030123m.g Setaria italica Si030123m.g I 0.807
CPRF1_PETCR Petroselinum crispum CPRF1_PETCR D 0.807
Pavir.Ba03287 Panicum virgatum Pavir.Ba03287 I 0.807
Pavir.Bb00931 Panicum virgatum Pavir.Bb00931 I 0.807
Si039367m.g Setaria italica Si039367m.g I 0.806
gene29546-v1.0-hybrid Fragaria vesca gene29546-v1.0-hybrid I 0.806
MDP0000239688 Malus domestica MDP0000239688 I 0.805
GLYMA16G15810 Glycine max GLYMA16G15810 I 0.804
GSMUA_Achr1G05050_001 Musa acuminata GSMUA_Achr1G05050_001 I 0.804
Lus10014324.g Linum usitatissimum Lus10014324.g I 0.803
Lus10026033.g Linum usitatissimum Lus10026033.g I 0.803
SapurV1A.0255s0070 Salix purpurea SapurV1A.0255s0070 I 0.803
SapurV1A.0817s0110 Salix purpurea SapurV1A.0817s0110 I 0.803
PRUPE_ppa020524mg Prunus persica PRUPE_ppa020524mg I 0.801
Pm024103 Prunus mume Pm024103 I 0.801
GLYMA08G34280 Glycine max GLYMA08G34280 I 0.800
evm.TU.supercontig_158.7 Carica papaya evm.TU.supercontig_158.7 I 0.800
Thhalv10016740m.g Eutrema salsugineum Thhalv10016740m.g I 0.800
gw1.27.125.1 Physcomitrella patens gw1.27.125.1 I 0.799
gw2.11.550.1 Micromonas sp RCC299 gw2.11.550.1 I 0.799
BRADI1G54180 Brachypodium distachyon BRADI1G54180 I 0.798
PGSC0003DMG400012660 Solanum tuberosum PGSC0003DMG400012660 I 0.798
Solyc02g085610.2 Solanum lycopersicum Solyc02g085610.2 I 0.798
Traes_2BL_245DDBC7B Triticum aestivum Traes_2BL_245DDBC7B I 0.798
TRIUR3_31142 Triticum urartu TRIUR3_31142 I 0.798
MDP0000231274 Malus domestica MDP0000231274 I 0.797
SELMODRAFT_125734 Selaginella moellendorffii SELMODRAFT_125734 I 0.796
SELMODRAFT_129391 Selaginella moellendorffii SELMODRAFT_129391 I 0.796
GSMUA_Achr4G33130_001 Musa acuminata GSMUA_Achr4G33130_001 I 0.795
gw1.33.173.1 Physcomitrella patens gw1.33.173.1 I 0.794
estExt_fgenesh2_pg.C_Chr_020452 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_020452 I 0.794
Solyc02g062950.2 Solanum lycopersicum Solyc02g062950.2 I 0.793
VIT_18s0001g12120 Vitis vinifera VIT_18s0001g12120 I 0.793
Gorai.007G205700 Gossypium raimondii Gorai.007G205700 I 0.793
Bo4g038560 Brassica oleracea Bo4g038560 I 0.792
estExt_fgenesh1_pg.C_10522 Micromonas pusilla estExt_fgenesh1_pg.C_10522 I 0.792
AMTR_s00048p00108400 Amborella trichopoda AMTR_s00048p00108400 I 0.791
PK07494.1 Cannabis sativa PK07494.1 I 0.791
LPERR03G32540 Leersia perrieri LPERR03G32540 I 0.790
Cla014415 Citrullus lanatus Cla014415 I 0.790
Cucsa.104970 Cucumis sativus Cucsa.104970 I 0.790
AMTR_s00059p00094730 Amborella trichopoda AMTR_s00059p00094730 I 0.789
Gorai.008G068900 Gossypium raimondii Gorai.008G068900 I 0.789
PDK_20s1310372g001 Phoenix dactylifera PDK_20s1310372g001 I 0.789
Bra005335 Brassica rapa Bra005335 I 0.788
BZIP68 Arabidopsis thaliana AT1G32150 D 0.787
bZIP68 Arabidopsis lyrata fgenesh2_kg.1__3350__AT1G32150.1 I 0.787
Ca_15839 Cicer arietinum Ca_15839 I 0.787
CPRF3_PETCR Petroselinum crispum CPRF3_PETCR D 0.787
Cagra.3359s0011 Capsella grandiflora Cagra.3359s0011 I 0.787
Thhalv10007879m.g Eutrema salsugineum Thhalv10007879m.g I 0.787
PDK_20s1372692g002 Phoenix dactylifera PDK_20s1372692g002 I 0.787
PRUPE_ppa008024mg Prunus persica PRUPE_ppa008024mg I 0.786
Pm026586 Prunus mume Pm026586 I 0.786
Ciclev10025963m.g Citrus clementina Ciclev10025963m.g I 0.786
orange1.1g018605m.g Citrus sinensis orange1.1g018605m.g I 0.786
VIT_02s0012g02250 Vitis vinifera VIT_02s0012g02250 I 0.785
Ca_11455 Cicer arietinum Ca_11455 I 0.785
Cagra.0993s0063 Capsella grandiflora Cagra.0993s0063 I 0.785
Eucgr.E00223 Eucalyptus grandis Eucgr.E00223 I 0.785
chr2.LjT41P23.50.nc Lotus japonicus chr2.LjT41P23.50.nc I 0.785
GLYMA02G06550 Glycine max GLYMA02G06550 I 0.784
GLYMA16G25600 Glycine max GLYMA16G25600 I 0.784
MTR_8g077950 Medicago truncatula MTR_8g077950 I 0.784
PDK_20s1368181g001 Phoenix dactylifera PDK_20s1368181g001 I 0.784
GLYMA01G01740 Glycine max GLYMA01G01740 I 0.783
GLYMA09G34170 Glycine max GLYMA09G34170 I 0.783
GSMUA_Achr5G14150_001 Musa acuminata GSMUA_Achr5G14150_001 I 0.783
MTR_5g028850 Medicago truncatula MTR_5g028850 I 0.783
Cla008988 Citrullus lanatus Cla008988 I 0.783
Cla016502 Citrullus lanatus Cla016502 I 0.783
Cucsa.322110 Cucumis sativus Cucsa.322110 I 0.783
Bostr.3359s0141 Boechera stricta Bostr.3359s0141 I 0.783
Ciclev10001333m.g Citrus clementina Ciclev10001333m.g I 0.783
Gorai.003G185700 Gossypium raimondii Gorai.003G185700 I 0.783
orange1.1g036551m.g Citrus sinensis orange1.1g036551m.g I 0.783
SapurV1A.0051s0250 Salix purpurea SapurV1A.0051s0250 I 0.783
LjSGA_036158.1 Lotus japonicus LjSGA_036158.1 I 0.783
Cucsa.312800 Cucumis sativus Cucsa.312800 I 0.782