CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_19.62
(
Carica papaya
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
evm.TU.supercontig_19.62
T071760_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BZIP18
M01777_2.00
Arabidopsis thaliana
NDMCARNHNN
NNDNYTGKHN
PBM
Weirauch et al.(2014)
pTH7316
0.830
0.935
BZIP18
M06768_2.00
Arabidopsis thaliana
DTGMCAGCTDD
HHAGCTGKCAH
Dap-seq
OMalley et al.(2016)
bZIP18_colamp_a
0.830
0.935
BZIP18
M06769_2.00
Arabidopsis thaliana
TGMCAGCTKKN
NMMAGCTGKCA
Dap-seq
OMalley et al.(2016)
bZIP18_col_v31
0.830
0.935
PK16335.1
M01157_2.00
Cannabis sativa
NNNNKACAGCTRN
NYAGCTGTMNNNN
PBM
Lambert et al.(2019)
pTH10187
0.819
0.952
PK00315.1
M01153_2.00
Cannabis sativa
NNGACAGCTRN
NYAGCTGTCNN
PBM
Lambert et al.(2019)
pTH10085
0.819
0.935
AtbZIP52
M06746_2.00
Arabidopsis thaliana
DTGMCAGCYBDNHH
DDNHVRGCTGKCAH
Dap-seq
OMalley et al.(2016)
bZIP52_colamp_a
0.814
0.887
AtbZIP52
M06747_2.00
Arabidopsis thaliana
DTGMCAGCYKDNHN
NDNHMRGCTGKCAH
Dap-seq
OMalley et al.(2016)
bZIP52_col_v31
0.814
0.887
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_19.62
bZIP
169
230
DPKRAKRIIANRQSAARSKERKARYISELERKVQTLQTEATTLSAQLTLFQRDTTGLTTENT
Links
Other
bZIP
family TFs
Other
Carica papaya
TFs
112 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29729.m002363
Ricinus communis
29729.m002363
I
0.851
29804.m001495
Ricinus communis
29804.m001495
I
0.819
AMTR_s00077p00070990
Amborella trichopoda
AMTR_s00077p00070990
I
0.819
Aquca_004_00525
Aquilegia coerulea
Aquca_004_00525
I
0.819
Aquca_045_00222
Aquilegia coerulea
Aquca_045_00222
I
0.838
AtbZIP52
Arabidopsis lyrata
Al_scaffold_0001_623
I
0.814
AtbZIP52
Arabidopsis thaliana
AT1G06850
D
0.814
AtbZIP52
Vitis vinifera
VIT_06s0004g08070
I
0.819
BGIOSGA012577
Oryza indica
BGIOSGA012577
I
0.819
BGIOSGA023710
Oryza indica
BGIOSGA023710
I
0.819
Bo4g012700
Brassica oleracea
Bo4g012700
I
0.830
Bo4g190320
Brassica oleracea
Bo4g190320
I
0.811
Bo8g007220
Brassica oleracea
Bo8g007220
I
0.814
Bo8g114410
Brassica oleracea
Bo8g114410
I
0.814
Bostr.25219s0275
Boechera stricta
Bostr.25219s0275
I
0.814
Bostr.9345s0072
Boechera stricta
Bostr.9345s0072
I
0.830
Bra004582
Brassica rapa
Bra004582
I
0.830
Bra016980
Brassica rapa
Bra016980
I
0.811
Bra030663
Brassica rapa
Bra030663
I
0.814
Bra031541
Brassica rapa
Bra031541
I
0.814
BRADI1G17700
Brachypodium distachyon
BRADI1G17700
I
0.789
BZIP18
Arabidopsis thaliana
AT2G40620
D
0.830
Cagra.1642s0027
Capsella grandiflora
Cagra.1642s0027
I
0.830
Cagra.1671s0308
Capsella grandiflora
Cagra.1671s0308
I
0.814
Carubv10009673m.g
Capsella rubella
Carubv10009673m.g
I
0.814
Carubv10025182m.g
Capsella rubella
Carubv10025182m.g
I
0.830
cassava43674.valid.m1
Manihot esculenta
cassava43674.valid.m1
I
0.832
Ca_08929
Cicer arietinum
Ca_08929
I
0.819
Ca_15657
Cicer arietinum
Ca_15657
I
0.819
Ciclev10032076m.g
Citrus clementina
Ciclev10032076m.g
I
0.819
Cla007409
Citrullus lanatus
Cla007409
I
0.819
Cla013626
Citrullus lanatus
Cla013626
I
0.819
Cucsa.118900
Cucumis sativus
Cucsa.118900
I
0.819
Cucsa.143950
Cucumis sativus
Cucsa.143950
I
0.819
Eucgr.G03135
Eucalyptus grandis
Eucgr.G03135
I
0.838
Eucgr.J00119
Eucalyptus grandis
Eucgr.J00119
I
0.838
evm.TU.supercontig_2.298
Carica papaya
evm.TU.supercontig_2.298
I
0.819
F775_32183
Aegilops tauschii
F775_32183
I
0.808
fgenesh2_kg.4__2179__AT2G40620.1
Arabidopsis lyrata
fgenesh2_kg.4__2179__AT2G40620.1
I
0.830
gene21344-v1.0-hybrid
Fragaria vesca
gene21344-v1.0-hybrid
I
0.819
gene28103-v1.0-hybrid
Fragaria vesca
gene28103-v1.0-hybrid
I
0.814
GLYMA02G40270
Glycine max
GLYMA02G40270
I
0.819
GLYMA11G30940
Glycine max
GLYMA11G30940
I
0.819
GLYMA14G38460
Glycine max
GLYMA14G38460
I
0.819
GLYMA18G05880
Glycine max
GLYMA18G05880
I
0.819
Gorai.009G293600
Gossypium raimondii
Gorai.009G293600
I
0.851
Gorai.010G218700
Gossypium raimondii
Gorai.010G218700
I
0.830
Gorai.011G209200
Gossypium raimondii
Gorai.011G209200
I
0.851
Gorai.012G014500
Gossypium raimondii
Gorai.012G014500
N
0.788
GRMZM2G062391
Zea mays
GRMZM2G062391
I
0.808
GRMZM2G149040
Zea mays
GRMZM2G149040
I
0.789
GRMZM2G151295
Zea mays
GRMZM2G151295
I
0.819
GSMUA_Achr11G23650_001
Musa acuminata
GSMUA_Achr11G23650_001
I
0.789
GSMUA_Achr2G18830_001
Musa acuminata
GSMUA_Achr2G18830_001
I
0.819
GSMUA_AchrUn_randomG14020_001
Musa acuminata
GSMUA_AchrUn_randomG14020_001
I
0.787
LPERR03G14390
Leersia perrieri
LPERR03G14390
I
0.819
Lus10008605.g
Linum usitatissimum
Lus10008605.g
I
0.819
Lus10009907.g
Linum usitatissimum
Lus10009907.g
I
0.819
Lus10012881.g
Linum usitatissimum
Lus10012881.g
I
0.851
Lus10030531.g
Linum usitatissimum
Lus10030531.g
I
0.851
Lus10042211.g
Linum usitatissimum
Lus10042211.g
I
0.819
MDP0000129203
Malus domestica
MDP0000129203
I
0.819
MDP0000210251
Malus domestica
MDP0000210251
I
0.819
MDP0000297791
Malus domestica
MDP0000297791
I
0.808
MDP0000305387
Malus domestica
MDP0000305387
I
0.808
mgf007830m
Mimulus guttatus
mgf007830m
I
0.808
MLOC_44311
Hordeum vulgare
MLOC_44311
I
0.819
MLOC_60045
Hordeum vulgare
MLOC_60045
I
0.808
MTR_3g467120
Medicago truncatula
MTR_3g467120
I
0.819
MTR_5g075390
Medicago truncatula
MTR_5g075390
I
0.819
OBART07G26390
Oryza barthii
OBART07G26390
I
0.819
OGLUM07G26420
Oryza glumaepatula
OGLUM07G26420
I
0.819
OMERI03G14760
Oryza meridionalis
OMERI03G14760
I
0.819
ONIVA03G17500
Oryza nivara
ONIVA03G17500
I
0.819
ONIVA07G26100
Oryza nivara
ONIVA07G26100
I
0.819
OPUNC03G15960
Oryza punctata
OPUNC03G15960
I
0.819
OPUNC07G24840
Oryza punctata
OPUNC07G24840
I
0.819
orange1.1g020026m.g
Citrus sinensis
orange1.1g020026m.g
I
0.819
ORUFI03G17050
Oryza rufipogon
ORUFI03G17050
I
0.819
Pavir.Ba00224
Panicum virgatum
Pavir.Ba00224
I
0.789
Pavir.Bb03755
Panicum virgatum
Pavir.Bb03755
I
0.832
Pavir.Ib01574
Panicum virgatum
Pavir.Ib01574
I
0.819
PGSC0003DMG400016651
Solanum tuberosum
PGSC0003DMG400016651
I
0.837
PGSC0003DMG400027599
Solanum tuberosum
PGSC0003DMG400027599
I
0.838
PK00315.1
Cannabis sativa
PK00315.1
D
0.819
PK16335.1
Cannabis sativa
PK16335.1
D
0.819
Pm000251
Prunus mume
Pm000251
I
0.819
Pm019060
Prunus mume
Pm019060
I
0.819
POPTR_0013s09350
Populus trichocarpa
POPTR_0013s09350
I
0.828
POPTR_0013s15280
Populus trichocarpa
POPTR_0013s15280
I
0.817
POPTR_0019s15040
Populus trichocarpa
POPTR_0019s15040
I
0.819
PRUPE_ppa006097mg
Prunus persica
PRUPE_ppa006097mg
I
0.819
PRUPE_ppa007645mg
Prunus persica
PRUPE_ppa007645mg
I
0.819
RF2B
Oryza sativa
OS03G0336200
I
0.819
SapurV1A.0182s0020
Salix purpurea
SapurV1A.0182s0020
I
0.812
SapurV1A.0215s0230
Salix purpurea
SapurV1A.0215s0230
I
0.819
SapurV1A.3480s0020
Salix purpurea
SapurV1A.3480s0020
I
0.819
SapurV1A.4004s0010
Salix purpurea
SapurV1A.4004s0010
I
0.812
Sb02g042990
Sorghum bicolor
Sb02g042990
I
0.789
Si030224m.g
Setaria italica
Si030224m.g
I
0.832
Si036380m.g
Setaria italica
Si036380m.g
I
0.819
Solyc06g048630.2
Solanum lycopersicum
Solyc06g048630.2
I
0.838
TCM_042286
Theobroma cacao
TCM_042286
I
0.819
TCM_045524
Theobroma cacao
TCM_045524
I
0.832
Thhalv10008146m.g
Eutrema salsugineum
Thhalv10008146m.g
I
0.814
Thhalv10016819m.g
Eutrema salsugineum
Thhalv10016819m.g
I
0.830
Traes_2BS_1B0F27580
Triticum aestivum
Traes_2BS_1B0F27580
I
0.816
Traes_2DS_93EAEC654
Triticum aestivum
Traes_2DS_93EAEC654
I
0.819
Traes_4AS_45B416B25
Triticum aestivum
Traes_4AS_45B416B25
I
0.808
Traes_4BL_9422485B3
Triticum aestivum
Traes_4BL_9422485B3
I
0.808
Traes_4DL_19DC0CA31
Triticum aestivum
Traes_4DL_19DC0CA31
I
0.808
VIT_13s0067g02900
Vitis vinifera
VIT_13s0067g02900
I
0.838