gene01680-v1.0-hybrid (Fragaria vesca)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 gene01680-v1.0-hybrid T071808_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK20942.1
M01159_2.00 		Cannabis sativa
NNNNDAMAKCTRN
NYAGMTKTHNNNN		 PBM
Lambert et al.(2019)
pTH11276 		0.793 0.825
AT1G06070
M06744_2.00 		Arabidopsis thaliana
TGMCAGCTGKM
KMCAGCTGKCA		 Dap-seq
OMalley et al.(2016)
bZIP69_col_a 		0.788 0.841
AT1G06070
M06745_2.00 		Arabidopsis thaliana
TGMCAGCTGKM
KMCAGCTGKCA		 Dap-seq
OMalley et al.(2016)
bZIP69_colamp_a 		0.788 0.841
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna01680.1-v1.0-hybrid bZIP 418 480

Links

Other bZIP family TFs
Other Fragaria vesca TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA004778 Oryza indica BGIOSGA004778 N 0.000
F775_11164 Aegilops tauschii F775_11164 N 0.000
GRMZM2G157679 Zea mays GRMZM2G157679 N 0.000
LPERR01G31690 Leersia perrieri LPERR01G31690 N 0.000
MLOC_69561 Hordeum vulgare MLOC_69561 N 0.000
OB01G45620 Oryza brachyantha OB01G45620 N 0.000
OBART01G36810 Oryza barthii OBART01G36810 N 0.000
OGLUM01G40820 Oryza glumaepatula OGLUM01G40820 N 0.000
OLONG_023424 Oryza longistaminata OLONG_023424 N 0.000
OMERI01G33930 Oryza meridionalis OMERI01G33930 N 0.000
ONIVA10G04710 Oryza nivara ONIVA10G04710 N 0.000
OPUNC01G35740 Oryza punctata OPUNC01G35740 N 0.000
ORGLA01G0306900 Oryza glaberrima ORGLA01G0306900 N 0.000
ORUFI01G40180 Oryza rufipogon ORUFI01G40180 N 0.000
OS01G0842200 Oryza sativa OS01G0842200 N 0.000
Pavir.Ea03354 Panicum virgatum Pavir.Ea03354 N 0.000
Pavir.Eb03680 Panicum virgatum Pavir.Eb03680 N 0.000
PDK_20s1329542g002 Phoenix dactylifera PDK_20s1329542g002 N 0.000
Sb03g039510 Sorghum bicolor Sb03g039510 N 0.000
Si000234m.g Setaria italica Si000234m.g N 0.000
TRAES3BF090100150CFD_g Triticum aestivum TRAES3BF090100150CFD_g N 0.000
TRAES3BF108400020CFD_g Triticum aestivum TRAES3BF108400020CFD_g N 0.000
Traes_3AL_60B6CD0A5 Triticum aestivum Traes_3AL_60B6CD0A5 N 0.000
Traes_3B_A25F058E5 Triticum aestivum Traes_3B_A25F058E5 N 0.000
Traes_4DS_050789E2A Triticum aestivum Traes_4DS_050789E2A N 0.000
TRIUR3_23165 Triticum urartu TRIUR3_23165 N 0.000