CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CpipJ_CPIJ012331
(
Culex pipiens
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
CpipJ_CPIJ012331
T077766_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CpipJ_CPIJ012331-RA
C2H2 ZF
201
231
ITCHKCTEAGTDNGETFDSFYQLRLHFKNQH
CpipJ_CPIJ012331-RA
C2H2 ZF
249
272
SRCVECNCIFKDKSSYANHMFLMH
CpipJ_CPIJ012331-RA
C2H2 ZF
280
302
FKCDRCAKAFAAEDLLNSHLKWH
CpipJ_CPIJ012331-RA
C2H2 ZF
310
333
HYCEKCNKYFLSARNLENHIFSHH
CpipJ_CPIJ012331-RA
C2H2 ZF
442
461
FKCELCGKTYADSSGLQIHK
CpipJ_CPIJ012331-RA
C2H2 ZF
473
495
FKCDICGAAFVKDYLLKQHTNWH
CpipJ_CPIJ012331-RA
C2H2 ZF
503
526
YYCELCNKAYSNSLQLRAHHQKKH
CpipJ_CPIJ012331-RA
C2H2 ZF
532
554
WVCDVCAKGFIHRALLEEHRLTH
Links
Other
C2H2 ZF
family TFs
Other
Culex pipiens
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA001450
Oryza indica
BGIOSGA001450
N
LPERR01G16460
Leersia perrieri
LPERR01G16460
N
OB01G28790
Oryza brachyantha
OB01G28790
N
OBART01G18970
Oryza barthii
OBART01G18970
N
OGLUM01G22570
Oryza glumaepatula
OGLUM01G22570
N
OLONG_002006
Oryza longistaminata
OLONG_002006
N
ONIVA01G21500
Oryza nivara
ONIVA01G21500
N
OPUNC01G19360
Oryza punctata
OPUNC01G19360
N
ORUFI01G21360
Oryza rufipogon
ORUFI01G21360
N
OS01G0547200
Oryza sativa
OS01G0547200
N
Pavir.Eb01543
Panicum virgatum
Pavir.Eb01543
N
Sb03g025310
Sorghum bicolor
Sb03g025310
N
Si000106m.g
Setaria italica
Si000106m.g
N