ACYPI004643 (Acyrthosiphon pisum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ACYPI004643 T079682_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
scrt
M03673_2.00
Drosophila melanogaster
RHGCAACAGGTGK

MCACCTGTTGCDY
SELEX
Nitta et al.(2015)
scrt_1
0.790 0.886
scrt
M06085_2.00
Drosophila melanogaster
MCCACCTGTTG

CAACAGGTGGK
B1H
Zhu et al.(2011)
scrt_SANGER_2.5_FBgn0004880
0.790 0.886
scrt
M06086_2.00
Drosophila melanogaster
DNKCAACAGGTGK

MCACCTGTTGMNH
B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_1_FBgn0004880
0.790 0.886
scrt
M06087_2.00
Drosophila melanogaster
VMCACCTGTTGMN

NKCAACAGGTGKB
B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_2_FBgn0004880
0.790 0.886
SCRT1
M02929_2.00
Homo sapiens
RHKCAACAGGTGKNH

DNMCACCTGTTGMDY
SELEX
Jolma et al.(2013)
SCRT1_1
0.788 0.833
SCRT1
M04655_2.00
Homo sapiens
NKCAACAGGTD

HACCTGTTGMN
SELEX
Yin et al.(2017)
SCRT1_eDBD_HT-SELEX
0.788 0.833
SCRT1
M08397_2.00
Homo sapiens
RWKCAACAGGTG

CACCTGTTGMWY
ChIP-seq
Schmitges et al.(2016)
Q9BWW7_1-4.RCADE
0.788 0.833
SCRT1
M04656_2.00
Homo sapiens
NGCRACAGGTD

HACCTGTYGCN
SELEX
Yin et al.(2017)
SCRT1_eDBD_Methyl-HT-SELEX
0.788 0.833
CG12605
M03691_2.00
Drosophila melanogaster
RHGCAACAGGTGN

NCACCTGTTGCDY
SELEX
Nitta et al.(2015)
CG12605_1
0.768 0.860
CG12605
M06139_2.00
Drosophila melanogaster
CACCTGTKG

CMACAGGTG
B1H
Zhu et al.(2011)
CG12605_SANGER_10_FBgn0035481
0.768 0.860
CG12605
M06140_2.00
Drosophila melanogaster
MCACCTGTKGVNN

NNBCMACAGGTGK
B1H
Zhu et al.(2011)
CG12605_SOLEXA_5_FBgn0035481
0.768 0.860
SCRT2
M02925_2.00
Homo sapiens
RHGCAACAGGTGB

VCACCTGTTGCDY
SELEX
Jolma et al.(2013)
SCRT2_1
0.760 0.789
SCRT2
M04643_2.00
Homo sapiens
NGCAACAGGTD

HACCTGTTGCN
SELEX
Yin et al.(2017)
SCRT2_eDBD_HT-SELEX
0.760 0.789
SCRT2
M04644_2.00
Homo sapiens
NGCRACAGGTG

CACCTGTYGCN
SELEX
Yin et al.(2017)
SCRT2_eDBD_Methyl-HT-SELEX
0.760 0.789
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACYPI004643-PA C2H2 ZF 191 213
ACYPI004643-PA C2H2 ZF 222 244
ACYPI004643-PA C2H2 ZF 248 270
ACYPI004643-PA C2H2 ZF 276 298
ACYPI004643-PA C2H2 ZF 304 325

Links

Other C2H2 ZF family TFs
Other Acyrthosiphon pisum TFs

186 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL004255 Aedes aegypti AAEL004255 I
AAEL013770 Aedes aegypti AAEL013770 I
AATE010559 Anopheles atroparvus AATE010559 I
ACEP26221 Atta cephalotes ACEP26221 I
ACOM039487 Anopheles coluzzii ACOM039487 I
ACUA020082 Anopheles culicifacies ACUA020082 I
ACYPI000849 Acyrthosiphon pisum ACYPI000849 I
ADAC005262 Anopheles darlingi ADAC005262 I
AFAF006673 Anopheles farauti AFAF006673 I
AFUN002606 Anopheles funestus AFUN002606 I
AGAP006592 Anopheles gambiae AGAP006592 I
AMEC005588 Anopheles melas AMEC005588 I
AMEM000073 Anopheles merus AMEM000073 I
ASIS005657 Anopheles sinensis ASIS005657 I
ASU_05469 Ascaris suum ASU_05469 I
BGIBMGA000319 Bombyx mori BGIBMGA000319 I
Blimp-1 Drosophila melanogaster FBgn0035625 D
Bm3574 Brugia malayi Bm3574 I
BTMF_0000836601 Brugia timori BTMF_0000836601 I
BXY_0993100 Bursaphelenchus xylophilus BXY_0993100 I
CapteG226252 Capitella teleta CapteG226252 I
Cflo_04377--XP_391847.3_APIME Camponotus floridanus Cflo_04377--XP_391847.3_APIME I
CGI_10024223 Crassostrea gigas CGI_10024223 I
CLEC009125 Cimex lectularius CLEC009125 I
CPIJ007425 Culex quinquefasciatus CPIJ007425 I
CpipJ_CPIJ007425 Culex pipiens CpipJ_CPIJ007425 I
D917_07972 Trichinella nativa D917_07972 I
D918_01175 Trichuris suis D918_01175 I
DAPPUDRAFT_319330 Daphnia pulex DAPPUDRAFT_319330 I
DME_0000608401 Dracunculus medinensis DME_0000608401 I
EFV52614 Trichinella spiralis EFV52614 I
EVEC_0000549701 Enterobius vermicularis EVEC_0000549701 I
GB51060 Apis mellifera GB51060 I
GE21501 Drosophila yakuba FBgn0238758 I
GF23985 Drosophila ananassae FBgn0100979 I
GG15278 Drosophila erecta FBgn0107530 I
GH16462 Drosophila grimshawi FBgn0123933 I
GJ13412 Drosophila virilis FBgn0200637 I
GK17303 Drosophila willistoni FBgn0219302 I
GM14713 Drosophila sechellia FBgn0169634 I
HHAL002221-PA Halyomorpha halys HHAL002221-PA I
HMEL007072 Heliconius melpomene HMEL007072 I
KGM_16647 Danaus plexippus KGM_16647 I
L596_g21750 Steinernema carpocapsae L596_g21750 I
L798_14234 Zootermopsis nevadensis L798_14234 I
L889_g7623 Steinernema feltiae L889_g7623 I
L892_g2443 Steinernema scapterisci L892_g2443 I
L893_g23908 Steinernema glaseri L893_g23908 I
L898_g18820 Steinernema monticolum L898_g18820 I
LCUP008191 Lucilia cuprina LCUP008191 I
LDEC016433 Leptinotarsa decemlineata LDEC016433 I
LOAG_11444 Loa loa LOAG_11444 I
LotgiG86198 Lottia gigantea LotgiG86198 I
MCINX009345 Melitaea cinxia MCINX009345 I
MDOA000384 Musca domestica MDOA000384 I
nDi.2.2.2.g10740 Dirofilaria immitis nDi.2.2.2.g10740 I
nLs.2.1.2.g09168 Litomosoides sigmodontis nLs.2.1.2.g09168 I
nOo.2.0.1.g07043 Onchocerca ochengi nOo.2.0.1.g07043 I
NV12817 Nasonia vitripennis NV12817 I
PHUM607020 Pediculus humanus PHUM607020 I
PPAI008567 Phlebotomus papatasi PPAI008567 I
RPRC001983 Rhodnius prolixus RPRC001983 I
SINV14078 Solenopsis invicta SINV14078 I
SMAR011793 Strigamia maritima SMAR011793 I
SMUV_0001104401 Syphacia muris SMUV_0001104401 I
SPAL_0000884500 Strongyloides papillosus SPAL_0000884500 I
SSTP_0000757300 Strongyloides stercoralis SSTP_0000757300 I
SVE_1713000 Strongyloides venezuelensis SVE_1713000 I
TC014741 Tribolium castaneum TC014741 I
TCLT_0000472801 Thelazia callipaeda TCLT_0000472801 I
TCNE_0001220201 Toxocara canis TCNE_0001220201 I
TMUE_s0064002300 Trichuris muris TMUE_s0064002300 I
TTRE_0000156401 Trichuris trichiura TTRE_0000156401 I
WBGene00238199 Onchocerca volvulus WBGene00238199 I
WUBG_04696 Wuchereria bancrofti WUBG_04696 I