BGIOSGA033524 (Oryza indica)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 BGIOSGA033524 T081554_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.773 0.696
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.773 0.696
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.772 0.652
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA033524-PA C2H2 ZF 45 67
BGIOSGA033524-PA C2H2 ZF 99 121

Links

Other C2H2 ZF family TFs
Other Oryza indica TFs

138 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AC205250.3_FG004 Zea mays AC205250.3_FG004 I 0.774
AT5G03510 Arabidopsis thaliana AT5G03510 D 0.772
AT5G04390 Arabidopsis thaliana AT5G04390 D 0.773
BGIOSGA004768 Oryza indica BGIOSGA004768 I 0.758
BGIOSGA013831 Oryza indica BGIOSGA013831 I 0.760
BGIOSGA013832 Oryza indica BGIOSGA013832 I 0.759
BRADI1G03770 Brachypodium distachyon BRADI1G03770 I 0.760
BRADI1G03780 Brachypodium distachyon BRADI1G03780 I 0.759
BRADI1G03790 Brachypodium distachyon BRADI1G03790 I 0.759
BRADI2G54500 Brachypodium distachyon BRADI2G54500 I 0.758
BRADI4G09410 Brachypodium distachyon BRADI4G09410 I 0.785
cassava15802.m1 Manihot esculenta cassava15802.m1 I 0.773
Eucgr.B02398 Eucalyptus grandis Eucgr.B02398 I 0.759
F775_08752 Aegilops tauschii F775_08752 I 0.778
F775_14723 Aegilops tauschii F775_14723 I 0.791
F775_17661 Aegilops tauschii F775_17661 I 0.759
F775_18608 Aegilops tauschii F775_18608 I 0.759
F775_18609 Aegilops tauschii F775_18609 I 0.760
F775_18611 Aegilops tauschii F775_18611 I 0.762
F775_22659 Aegilops tauschii F775_22659 I 0.759
F775_30269 Aegilops tauschii F775_30269 I 0.762
F775_30895 Aegilops tauschii F775_30895 I 0.760
F775_30896 Aegilops tauschii F775_30896 I 0.784
F775_52290 Aegilops tauschii F775_52290 I 0.762
GRMZM2G002805 Zea mays GRMZM2G002805 I 0.764
GRMZM2G002815 Zea mays GRMZM2G002815 I 0.759
GRMZM2G061626 Zea mays GRMZM2G061626 I 0.764
GRMZM2G112799 Zea mays GRMZM2G112799 I 0.758
GRMZM2G307402 Zea mays GRMZM2G307402 I 0.759
GRMZM2G338056 Zea mays GRMZM2G338056 I 0.791
GRMZM2G376061 Zea mays GRMZM2G376061 I 0.758
GSMUA_Achr10G06730_001 Musa acuminata GSMUA_Achr10G06730_001 I 0.782
GSMUA_Achr10G13530_001 Musa acuminata GSMUA_Achr10G13530_001 I 0.760
GSMUA_Achr10G31400_001 Musa acuminata GSMUA_Achr10G31400_001 N 0.760
GSMUA_Achr11G02250_001 Musa acuminata GSMUA_Achr11G02250_001 I 0.758
GSMUA_Achr11G21920_001 Musa acuminata GSMUA_Achr11G21920_001 I 0.758
GSMUA_Achr11G23970_001 Musa acuminata GSMUA_Achr11G23970_001 I 0.784
GSMUA_Achr1G06720_001 Musa acuminata GSMUA_Achr1G06720_001 I 0.758
GSMUA_Achr7G20260_001 Musa acuminata GSMUA_Achr7G20260_001 N 0.762
LPERR01G31500 Leersia perrieri LPERR01G31500 I 0.758
LPERR03G33230 Leersia perrieri LPERR03G33230 I 0.760
LPERR03G33240 Leersia perrieri LPERR03G33240 I 0.759
LPERR05G15220 Leersia perrieri LPERR05G15220 I 0.756
Lus10040312.g Linum usitatissimum Lus10040312.g I 0.773
MLOC_14920 Hordeum vulgare MLOC_14920 I 0.783
MLOC_19822 Hordeum vulgare MLOC_19822 I 0.760
MLOC_63032 Hordeum vulgare MLOC_63032 I 0.759
MLOC_67028 Hordeum vulgare MLOC_67028 I 0.759
MLOC_76196 Hordeum vulgare MLOC_76196 I 0.786
OB03G46010 Oryza brachyantha OB03G46010 I 0.759
OB11G27860 Oryza brachyantha OB11G27860 I 0.827
OBART03G39050 Oryza barthii OBART03G39050 I 0.759
OBART11G23480 Oryza barthii OBART11G23480 I 0.827
OGLUM01G40530 Oryza glumaepatula OGLUM01G40530 I 0.758
OGLUM03G38900 Oryza glumaepatula OGLUM03G38900 I 0.760
OGLUM03G38910 Oryza glumaepatula OGLUM03G38910 I 0.759
OMERI01G33710 Oryza meridionalis OMERI01G33710 I 0.758
OMERI03G35870 Oryza meridionalis OMERI03G35870 I 0.760
OMERI03G35880 Oryza meridionalis OMERI03G35880 I 0.759
ONIVA01G41740 Oryza nivara ONIVA01G41740 I 0.758
ONIVA03G40710 Oryza nivara ONIVA03G40710 I 0.760
ONIVA03G40720 Oryza nivara ONIVA03G40720 I 0.759
OPUNC01G35440 Oryza punctata OPUNC01G35440 I 0.758
OPUNC01G35470 Oryza punctata OPUNC01G35470 I 0.758
OPUNC03G12210 Oryza punctata OPUNC03G12210 I 0.774
OPUNC11G19830 Oryza punctata OPUNC11G19830 I 0.827
ORGLA01G0304700 Oryza glaberrima ORGLA01G0304700 I 0.758
ORGLA03G0358100 Oryza glaberrima ORGLA03G0358100 I 0.760
ORGLA03G0358200 Oryza glaberrima ORGLA03G0358200 I 0.759
ORGLA11G0188100 Oryza glaberrima ORGLA11G0188100 I 0.827
ORUFI03G40740 Oryza rufipogon ORUFI03G40740 I 0.760
ORUFI11G25330 Oryza rufipogon ORUFI11G25330 I 0.827
OS01G0839100 Oryza sativa OS01G0839100 I 0.758
OS03G0820300 Oryza sativa OS03G0820300 I 0.760
OS03G0820400 Oryza sativa OS03G0820400 I 0.759
OS11G0702400 Oryza sativa OS11G0702400 I 0.827
Pavir.Cb00699 Panicum virgatum Pavir.Cb00699 N 0.796
Pavir.Da00814 Panicum virgatum Pavir.Da00814 I 0.791
Pavir.Da00815 Panicum virgatum Pavir.Da00815 I 0.791
Pavir.Da01393 Panicum virgatum Pavir.Da01393 I 0.767
Pavir.Da01563 Panicum virgatum Pavir.Da01563 I 0.791
Pavir.Eb03660 Panicum virgatum Pavir.Eb03660 I 0.758
Pavir.Ha00193 Panicum virgatum Pavir.Ha00193 I 0.767
Pavir.Ha00194 Panicum virgatum Pavir.Ha00194 I 0.791
Pavir.Hb00003 Panicum virgatum Pavir.Hb00003 I 0.791
Pavir.Hb00023 Panicum virgatum Pavir.Hb00023 I 0.767
Pavir.Hb00056 Panicum virgatum Pavir.Hb00056 I 0.791
Pavir.Ia00291 Panicum virgatum Pavir.Ia00291 I 0.759
Pavir.Ia00292 Panicum virgatum Pavir.Ia00292 I 0.759
Pavir.J00893 Panicum virgatum Pavir.J00893 I 0.759
Pavir.J00894 Panicum virgatum Pavir.J00894 I 0.759
Pavir.J03079 Panicum virgatum Pavir.J03079 I 0.762
Pavir.J04850 Panicum virgatum Pavir.J04850 I 0.758
Pavir.J14296 Panicum virgatum Pavir.J14296 I 0.796
Pavir.J14338 Panicum virgatum Pavir.J14338 I 0.758
Pavir.J30713 Panicum virgatum Pavir.J30713 I 0.796
PGSC0003DMG401030312 Solanum tuberosum PGSC0003DMG401030312 I 0.759
POPTR_0006s12340 Populus trichocarpa POPTR_0006s12340 I 0.773
SapurV1A.0008s0970 Salix purpurea SapurV1A.0008s0970 I 0.772
Sb01g003280 Sorghum bicolor Sb01g003280 I 0.759
Sb03g039270 Sorghum bicolor Sb03g039270 I 0.758
Sb05g027450 Sorghum bicolor Sb05g027450 I 0.786
Sb10g031270 Sorghum bicolor Sb10g031270 I 0.758
Si003051m.g Setaria italica Si003051m.g I 0.759
Si008395m.g Setaria italica Si008395m.g I 0.758
Si026973m.g Setaria italica Si026973m.g I 0.791
Si027432m.g Setaria italica Si027432m.g I 0.791
Si037251m.g Setaria italica Si037251m.g I 0.759
Si037672m.g Setaria italica Si037672m.g I 0.759
Solyc06g075780.1 Solanum lycopersicum Solyc06g075780.1 I 0.759
Solyc11g073060.1 Solanum lycopersicum Solyc11g073060.1 I 0.758
TRAES3BF127400030CFD_g Triticum aestivum TRAES3BF127400030CFD_g I 0.758
Traes_4DS_276818E4F Triticum aestivum Traes_4DS_276818E4F I 0.791
Traes_5BL_3A9D3CEEF Triticum aestivum Traes_5BL_3A9D3CEEF I 0.760
Traes_5BL_3B50B6963 Triticum aestivum Traes_5BL_3B50B6963 I 0.760
Traes_5BL_56E52A2FC Triticum aestivum Traes_5BL_56E52A2FC N 0.760
Traes_5BL_630A8A142 Triticum aestivum Traes_5BL_630A8A142 I 0.762
Traes_5BL_63AE36D3A Triticum aestivum Traes_5BL_63AE36D3A I 0.762
Traes_5BL_6F2D345E2 Triticum aestivum Traes_5BL_6F2D345E2 I 0.760
Traes_5BL_8DB8274DB1 Triticum aestivum Traes_5BL_8DB8274DB1 I 0.759
Traes_5BL_9C687EE11 Triticum aestivum Traes_5BL_9C687EE11 I 0.760
Traes_5BL_B038BE0A3 Triticum aestivum Traes_5BL_B038BE0A3 I 0.759
Traes_5BL_BB99746DD Triticum aestivum Traes_5BL_BB99746DD I 0.760
Traes_5BL_D53A846BE Triticum aestivum Traes_5BL_D53A846BE I 0.762
Traes_5BL_F74D668D9 Triticum aestivum Traes_5BL_F74D668D9 I 0.762
Traes_5DL_4B4927090 Triticum aestivum Traes_5DL_4B4927090 I 0.783
Traes_5DL_4E890ABF3 Triticum aestivum Traes_5DL_4E890ABF3 I 0.762
Traes_5DL_50E35B4F3 Triticum aestivum Traes_5DL_50E35B4F3 I 0.759
Traes_5DL_90F570468 Triticum aestivum Traes_5DL_90F570468 I 0.760
Traes_5DL_9D713AD9C Triticum aestivum Traes_5DL_9D713AD9C I 0.760
Traes_5DL_F269EF70D Triticum aestivum Traes_5DL_F269EF70D I 0.759
TRIUR3_01057 Triticum urartu TRIUR3_01057 N 0.764
TRIUR3_01060 Triticum urartu TRIUR3_01060 I 0.784
TRIUR3_01063 Triticum urartu TRIUR3_01063 I 0.760
TRIUR3_01065 Triticum urartu TRIUR3_01065 I 0.760
TRIUR3_12166 Triticum urartu TRIUR3_12166 I 0.759
TRIUR3_15911 Triticum urartu TRIUR3_15911 I 0.759
TRIUR3_15912 Triticum urartu TRIUR3_15912 I 0.762