Bo4g166690 (Brassica oleracea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Bo4g166690 T081741_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.787 0.783
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.786 0.804
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.786 0.804
AT3G46070
M06813_2.00 		Arabidopsis thaliana
HYHHYHTCACTYHHH
DDDRAGTGADRDDRD		 Dap-seq
OMalley et al.(2016)
AT3G46070_col_a 		0.776 0.804
AT3G53600
M01856_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7188 		0.771 0.761
AT3G53600
M00858_2.00 		Arabidopsis thaliana
NNNNRSWN
NWSYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT18 		0.771 0.761
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.767 0.804
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.756 0.717
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.756 0.717
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.756 0.717
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo4g166690.1 C2H2 ZF 33 55
Bo4g166690.1 C2H2 ZF 77 99

Links

Other C2H2 ZF family TFs
Other Brassica oleracea TFs

343 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AC205250.3_FG004 Zea mays AC205250.3_FG004 I 0.758
Aquca_010_00703 Aquilegia coerulea Aquca_010_00703 I 0.781
Aquca_010_00704 Aquilegia coerulea Aquca_010_00704 I 0.785
BGIOSGA000523 Oryza indica BGIOSGA000523 I 0.782
BGIOSGA004768 Oryza indica BGIOSGA004768 I 0.770
BGIOSGA013831 Oryza indica BGIOSGA013831 I 0.773
BGIOSGA013832 Oryza indica BGIOSGA013832 I 0.775
BGIOSGA018935 Oryza indica BGIOSGA018935 I 0.761
BGIOSGA033524 Oryza indica BGIOSGA033524 I
BRADI1G03770 Brachypodium distachyon BRADI1G03770 I 0.770
BRADI1G03780 Brachypodium distachyon BRADI1G03780 I 0.770
BRADI1G03790 Brachypodium distachyon BRADI1G03790 I 0.775
BRADI2G23160 Brachypodium distachyon BRADI2G23160 I
BRADI2G37430 Brachypodium distachyon BRADI2G37430 I 0.757
BRADI2G54500 Brachypodium distachyon BRADI2G54500 I 0.770
BRADI4G09410 Brachypodium distachyon BRADI4G09410 I
cassava39064.m1 Manihot esculenta cassava39064.m1 I 0.779
chr3.LjT39G24.10.nd Lotus japonicus chr3.LjT39G24.10.nd I 0.776
Ciclev10032889m.g Citrus clementina Ciclev10032889m.g I 0.779
Ciclev10032899m.g Citrus clementina Ciclev10032899m.g I 0.779
Ciclev10032922m.g Citrus clementina Ciclev10032922m.g I 0.779
Cla008415 Citrullus lanatus Cla008415 I 0.790
Cla013490 Citrullus lanatus Cla013490 I 0.787
Cucsa.213470 Cucumis sativus Cucsa.213470 I 0.790
Cucsa.379890 Cucumis sativus Cucsa.379890 I 0.787
Eucgr.B02398 Eucalyptus grandis Eucgr.B02398 I 0.799
F775_08752 Aegilops tauschii F775_08752 I
F775_14723 Aegilops tauschii F775_14723 I
F775_17660 Aegilops tauschii F775_17660 N
F775_17661 Aegilops tauschii F775_17661 I
F775_18608 Aegilops tauschii F775_18608 I 0.775
F775_18609 Aegilops tauschii F775_18609 I 0.775
F775_18611 Aegilops tauschii F775_18611 I
F775_21892 Aegilops tauschii F775_21892 N
F775_22659 Aegilops tauschii F775_22659 I
F775_30269 Aegilops tauschii F775_30269 I
F775_30895 Aegilops tauschii F775_30895 I
F775_30896 Aegilops tauschii F775_30896 I
F775_52290 Aegilops tauschii F775_52290 I
F775_52353 Aegilops tauschii F775_52353 I 0.773
F775_52535 Aegilops tauschii F775_52535 I 0.763
gene13960-v1.0-hybrid Fragaria vesca gene13960-v1.0-hybrid I 0.790
GLYMA11G15140 Glycine max GLYMA11G15140 I 0.776
GRMZM2G002805 Zea mays GRMZM2G002805 I 0.764
GRMZM2G002815 Zea mays GRMZM2G002815 I
GRMZM2G061626 Zea mays GRMZM2G061626 I 0.764
GRMZM2G061897 Zea mays GRMZM2G061897 I
GRMZM2G112799 Zea mays GRMZM2G112799 I 0.770
GRMZM2G307402 Zea mays GRMZM2G307402 I 0.769
GRMZM2G338056 Zea mays GRMZM2G338056 I
GRMZM2G376061 Zea mays GRMZM2G376061 I 0.770
GRMZM5G804618 Zea mays GRMZM5G804618 I 0.782
GSMUA_Achr10G06730_001 Musa acuminata GSMUA_Achr10G06730_001 I 0.776
GSMUA_Achr10G13530_001 Musa acuminata GSMUA_Achr10G13530_001 I
GSMUA_Achr11G02250_001 Musa acuminata GSMUA_Achr11G02250_001 I 0.776
GSMUA_Achr11G21920_001 Musa acuminata GSMUA_Achr11G21920_001 I 0.776
GSMUA_Achr11G23970_001 Musa acuminata GSMUA_Achr11G23970_001 I
GSMUA_Achr11G24480_001 Musa acuminata GSMUA_Achr11G24480_001 I 0.779
GSMUA_Achr1G01260_001 Musa acuminata GSMUA_Achr1G01260_001 I 0.781
GSMUA_Achr1G06720_001 Musa acuminata GSMUA_Achr1G06720_001 I 0.777
GSMUA_Achr5G28550_001 Musa acuminata GSMUA_Achr5G28550_001 I 0.803
GSMUA_Achr5G29140_001 Musa acuminata GSMUA_Achr5G29140_001 I 0.780
GSMUA_Achr9G03210_001 Musa acuminata GSMUA_Achr9G03210_001 I 0.761
LPERR01G31460 Leersia perrieri LPERR01G31460 I 0.782
LPERR01G31500 Leersia perrieri LPERR01G31500 I 0.770
LPERR03G33230 Leersia perrieri LPERR03G33230 I 0.773
LPERR03G33240 Leersia perrieri LPERR03G33240 I 0.775
LPERR05G01000 Leersia perrieri LPERR05G01000 I 0.761
LPERR05G15220 Leersia perrieri LPERR05G15220 I
Lus10023433.g Linum usitatissimum Lus10023433.g I 0.757
Lus10040312.g Linum usitatissimum Lus10040312.g I 0.757
MDP0000170739 Malus domestica MDP0000170739 I 0.790
MDP0000224773 Malus domestica MDP0000224773 I 0.790
MDP0000595671 Malus domestica MDP0000595671 I 0.792
MDP0000606526 Malus domestica MDP0000606526 I 0.790
MLOC_14920 Hordeum vulgare MLOC_14920 I
MLOC_19822 Hordeum vulgare MLOC_19822 I 0.773
MLOC_39001 Hordeum vulgare MLOC_39001 I 0.757
MLOC_63032 Hordeum vulgare MLOC_63032 I 0.775
MLOC_67028 Hordeum vulgare MLOC_67028 I
MLOC_76196 Hordeum vulgare MLOC_76196 I
MTR_1g067640 Medicago truncatula MTR_1g067640 I 0.761
MTR_1g067650 Medicago truncatula MTR_1g067650 I 0.761
OB03G46010 Oryza brachyantha OB03G46010 I 0.775
OB11G27860 Oryza brachyantha OB11G27860 I
OBART03G39050 Oryza barthii OBART03G39050 I 0.775
OBART05G01050 Oryza barthii OBART05G01050 I 0.761
OBART05G19310 Oryza barthii OBART05G19310 I
OBART11G23480 Oryza barthii OBART11G23480 I
OGLUM01G40470 Oryza glumaepatula OGLUM01G40470 I 0.782
OGLUM01G40530 Oryza glumaepatula OGLUM01G40530 I 0.770
OGLUM03G38900 Oryza glumaepatula OGLUM03G38900 I 0.773
OGLUM03G38910 Oryza glumaepatula OGLUM03G38910 I 0.775
OGLUM05G01060 Oryza glumaepatula OGLUM05G01060 I 0.761
OGLUM05G20400 Oryza glumaepatula OGLUM05G20400 I
OMERI01G33680 Oryza meridionalis OMERI01G33680 I 0.782
OMERI01G33710 Oryza meridionalis OMERI01G33710 I 0.770
OMERI03G35870 Oryza meridionalis OMERI03G35870 I 0.773
OMERI03G35880 Oryza meridionalis OMERI03G35880 I 0.775
OMERI05G01120 Oryza meridionalis OMERI05G01120 I 0.761
OMERI05G16850 Oryza meridionalis OMERI05G16850 I
ONIVA01G41600 Oryza nivara ONIVA01G41600 I 0.782
ONIVA01G41740 Oryza nivara ONIVA01G41740 I 0.770
ONIVA03G40710 Oryza nivara ONIVA03G40710 I 0.773
ONIVA03G40720 Oryza nivara ONIVA03G40720 I 0.775
ONIVA05G01090 Oryza nivara ONIVA05G01090 I 0.761
ONIVA05G20190 Oryza nivara ONIVA05G20190 I
OPUNC01G35440 Oryza punctata OPUNC01G35440 I 0.770
OPUNC01G35470 Oryza punctata OPUNC01G35470 I 0.770
OPUNC05G00940 Oryza punctata OPUNC05G00940 I 0.761
OPUNC05G16930 Oryza punctata OPUNC05G16930 I
OPUNC05G16960 Oryza punctata OPUNC05G16960 I
OPUNC11G19830 Oryza punctata OPUNC11G19830 I
orange1.1g040287m.g Citrus sinensis orange1.1g040287m.g I 0.779
orange1.1g041414m.g Citrus sinensis orange1.1g041414m.g I 0.779
orange1.1g044181m.g Citrus sinensis orange1.1g044181m.g I 0.779
ORGLA01G0304300 Oryza glaberrima ORGLA01G0304300 I 0.782
ORGLA01G0304700 Oryza glaberrima ORGLA01G0304700 I 0.770
ORGLA03G0358100 Oryza glaberrima ORGLA03G0358100 I 0.773
ORGLA03G0358200 Oryza glaberrima ORGLA03G0358200 I 0.775
ORGLA05G0010800 Oryza glaberrima ORGLA05G0010800 I 0.761
ORGLA05G0167500 Oryza glaberrima ORGLA05G0167500 I
ORGLA11G0188100 Oryza glaberrima ORGLA11G0188100 I
ORUFI01G40000 Oryza rufipogon ORUFI01G40000 I 0.782
ORUFI03G40740 Oryza rufipogon ORUFI03G40740 I 0.773
ORUFI05G01070 Oryza rufipogon ORUFI05G01070 I 0.761
ORUFI05G20520 Oryza rufipogon ORUFI05G20520 I
ORUFI11G25330 Oryza rufipogon ORUFI11G25330 I
OS01G0838600 Oryza sativa OS01G0838600 I 0.782
OS01G0839100 Oryza sativa OS01G0839100 I 0.770
OS03G0820300 Oryza sativa OS03G0820300 I 0.773
OS03G0820400 Oryza sativa OS03G0820400 I 0.775
OS05G0114400 Oryza sativa OS05G0114400 I 0.761
OS05G0460900 Oryza sativa OS05G0460900 I
OS11G0702400 Oryza sativa OS11G0702400 I
Pavir.Ca00650 Panicum virgatum Pavir.Ca00650 I 0.761
Pavir.Da00814 Panicum virgatum Pavir.Da00814 I
Pavir.Da00815 Panicum virgatum Pavir.Da00815 I
Pavir.Da01393 Panicum virgatum Pavir.Da01393 I
Pavir.Da01563 Panicum virgatum Pavir.Da01563 I
Pavir.Ea03334 Panicum virgatum Pavir.Ea03334 I 0.758
Pavir.Eb03660 Panicum virgatum Pavir.Eb03660 I 0.770
Pavir.Ha00193 Panicum virgatum Pavir.Ha00193 I
Pavir.Ha00194 Panicum virgatum Pavir.Ha00194 I
Pavir.Hb00003 Panicum virgatum Pavir.Hb00003 I
Pavir.Hb00023 Panicum virgatum Pavir.Hb00023 I
Pavir.Hb00056 Panicum virgatum Pavir.Hb00056 I
Pavir.Ia00291 Panicum virgatum Pavir.Ia00291 I
Pavir.Ia00292 Panicum virgatum Pavir.Ia00292 I
Pavir.Ia00294 Panicum virgatum Pavir.Ia00294 I
Pavir.Ib04509 Panicum virgatum Pavir.Ib04509 I
Pavir.J00893 Panicum virgatum Pavir.J00893 I
Pavir.J00894 Panicum virgatum Pavir.J00894 I 0.775
Pavir.J03079 Panicum virgatum Pavir.J03079 I
Pavir.J04850 Panicum virgatum Pavir.J04850 I 0.770
Pavir.J14296 Panicum virgatum Pavir.J14296 I
Pavir.J14338 Panicum virgatum Pavir.J14338 I 0.770
Pavir.J30713 Panicum virgatum Pavir.J30713 I
Pavir.J32634 Panicum virgatum Pavir.J32634 I 0.760
PGSC0003DMG401030312 Solanum tuberosum PGSC0003DMG401030312 I 0.775
Pm000815 Prunus mume Pm000815 I 0.787
POPTR_0001s24250 Populus trichocarpa POPTR_0001s24250 I 0.762
POPTR_0009s03280 Populus trichocarpa POPTR_0009s03280 I 0.762
POPTR_1833s00200 Populus trichocarpa POPTR_1833s00200 I 0.762
PRUPE_ppa012242mg Prunus persica PRUPE_ppa012242mg I 0.781
SapurV1A.0040s0050 Salix purpurea SapurV1A.0040s0050 I 0.761
SapurV1A.4260s0020 Salix purpurea SapurV1A.4260s0020 I 0.761
Sb01g003280 Sorghum bicolor Sb01g003280 I 0.775
Sb03g039270 Sorghum bicolor Sb03g039270 I 0.770
Sb05g027450 Sorghum bicolor Sb05g027450 I
Sb09g001560 Sorghum bicolor Sb09g001560 I 0.761
Sb10g031270 Sorghum bicolor Sb10g031270 I 0.771
Si003051m.g Setaria italica Si003051m.g I 0.769
Si008395m.g Setaria italica Si008395m.g I 0.771
Si023353m.g Setaria italica Si023353m.g I 0.761
Si026973m.g Setaria italica Si026973m.g I
Si027432m.g Setaria italica Si027432m.g I
Si037251m.g Setaria italica Si037251m.g I
Si037672m.g Setaria italica Si037672m.g I 0.775
Solyc06g075780.1 Solanum lycopersicum Solyc06g075780.1 I 0.775
Solyc11g073060.1 Solanum lycopersicum Solyc11g073060.1 I 0.776
TRAES3BF117500110CFD_g Triticum aestivum TRAES3BF117500110CFD_g I 0.784
TRAES3BF127400030CFD_g Triticum aestivum TRAES3BF127400030CFD_g I 0.770
Traes_1AS_8F01029FE Triticum aestivum Traes_1AS_8F01029FE I
Traes_1BS_22E395F75 Triticum aestivum Traes_1BS_22E395F75 I 0.763
Traes_1BS_527ED00B9 Triticum aestivum Traes_1BS_527ED00B9 I
Traes_1BS_7B7D5282B Triticum aestivum Traes_1BS_7B7D5282B I
Traes_1DS_75AF80583 Triticum aestivum Traes_1DS_75AF80583 I
Traes_1DS_CE96E8BF0 Triticum aestivum Traes_1DS_CE96E8BF0 I 0.763
Traes_1DS_D1F453705 Triticum aestivum Traes_1DS_D1F453705 I
Traes_4DS_276818E4F Triticum aestivum Traes_4DS_276818E4F I
Traes_5BL_3A9D3CEEF Triticum aestivum Traes_5BL_3A9D3CEEF I 0.773
Traes_5BL_3B50B6963 Triticum aestivum Traes_5BL_3B50B6963 I
Traes_5BL_56E52A2FC Triticum aestivum Traes_5BL_56E52A2FC N
Traes_5BL_630A8A142 Triticum aestivum Traes_5BL_630A8A142 I
Traes_5BL_63AE36D3A Triticum aestivum Traes_5BL_63AE36D3A I
Traes_5BL_6F2D345E2 Triticum aestivum Traes_5BL_6F2D345E2 I
Traes_5BL_8DB8274DB1 Triticum aestivum Traes_5BL_8DB8274DB1 I
Traes_5BL_9C687EE11 Triticum aestivum Traes_5BL_9C687EE11 I 0.773
Traes_5BL_B038BE0A3 Triticum aestivum Traes_5BL_B038BE0A3 I
Traes_5BL_BB99746DD Triticum aestivum Traes_5BL_BB99746DD I 0.773
Traes_5BL_D53A846BE Triticum aestivum Traes_5BL_D53A846BE I
Traes_5BL_F74D668D9 Triticum aestivum Traes_5BL_F74D668D9 I
Traes_5DL_4B4927090 Triticum aestivum Traes_5DL_4B4927090 I
Traes_5DL_4E890ABF3 Triticum aestivum Traes_5DL_4E890ABF3 I
Traes_5DL_50E35B4F3 Triticum aestivum Traes_5DL_50E35B4F3 I 0.775
Traes_5DL_90F570468 Triticum aestivum Traes_5DL_90F570468 I
Traes_5DL_9D713AD9C Triticum aestivum Traes_5DL_9D713AD9C I 0.767
Traes_5DL_F269EF70D Triticum aestivum Traes_5DL_F269EF70D I
TRIUR3_01060 Triticum urartu TRIUR3_01060 I
TRIUR3_01063 Triticum urartu TRIUR3_01063 I 0.770
TRIUR3_01065 Triticum urartu TRIUR3_01065 I 0.775
TRIUR3_04728 Triticum urartu TRIUR3_04728 I
TRIUR3_11899 Triticum urartu TRIUR3_11899 I 0.757
TRIUR3_12166 Triticum urartu TRIUR3_12166 I
TRIUR3_15911 Triticum urartu TRIUR3_15911 I
TRIUR3_15912 Triticum urartu TRIUR3_15912 I