Bra040325 (Brassica rapa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Bra040325 T081977_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.803 0.935
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.803 0.891
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.778 0.848
ZAT10
M01852_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7255 		0.776 0.696
ZAT10
M06799_2.00 		Arabidopsis thaliana
WSHHCACT
AGTGDDSW		 Dap-seq
OMalley et al.(2016)
STZ_colamp_a 		0.776 0.696
ZAT10
M06800_2.00 		Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR		 Dap-seq
OMalley et al.(2016)
STZ_col 		0.776 0.696
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.775 0.717
ZAT6
M00861_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT6 		0.775 0.696
AZF1
M01860_2.00 		Arabidopsis thaliana
NWSYDNN
NNHRSWN		 PBM
Weirauch et al.(2014)
pTH7163 		0.766 0.717
AZF1
M06826_2.00 		Arabidopsis thaliana
WCACTVWCWNH
DNWGWBAGTGW		 Dap-seq
OMalley et al.(2016)
AZF1_colamp_a 		0.766 0.717
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra040325.1-P C2H2 ZF 168 190
Bra040325.1-P C2H2 ZF 216 238

Links

Other C2H2 ZF family TFs
Other Brassica rapa TFs

192 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
1645_YBR182C Saccharomyces bayanus 1645_YBR182C I 0.000
1735_Multiple Saccharomyces paradoxus 1735_Multiple I 0.000
21954_YPL089C Saccharomyces mikatae 21954_YPL089C I 0.000
25226_YPL089C Saccharomyces bayanus 25226_YPL089C I 0.000
572_YBR182C Saccharomyces mikatae 572_YBR182C I 0.000
A1O1_05243 Capronia coronata A1O1_05243 I 0.000
A1O3_09529 Capronia epimyces A1O3_09529 I 0.000
A1O5_02336 Cladophialophora psammophila A1O5_02336 I 0.000
A1O7_07076 Cladophialophora yegresii A1O7_07076 I 0.000
A1O9_04901 Exophiala aquamarina A1O9_04901 I 0.000
AB03118.1 Alternaria brassicicola AB03118.1 I 0.000
ACLA_036490 Aspergillus clavatus CADACLAG00003970 I 0.000
AFUA_3G08520 Aspergillus fumigatus CADAFUAG00005633 I 0.000
AGOS_AGR198C Ashbya gossypii AGOS_AGR198C I 0.000
ANIA_02984 Aspergillus nidulans CADANIAG00010096 I 0.000
ARB_05322 Arthroderma benhamiae ARB_05322 I 0.000
ATEG_01619 Aspergillus terreus CADATEAG00002690 I 0.000
AUEXF2481DRAFT_43803 Aureobasidium subglaciale AUEXF2481DRAFT_43803 I 0.000
BAUCODRAFT_25460 Baudoinia compniacensis BAUCODRAFT_25460 I 0.000
Bcin05g04030 Botrytis cinerea Bcin05g04030 I 0.000
BDDG_00259 Blastomyces dermatitidis BDDG_00259 I 0.000
BGHDH14_bghG002741000001001 Blumeria graminis BGHDH14_bghG002741000001001 I 0.000
BN7_244 Wickerhamomyces ciferrii BN7_244 I 0.000
BOTBODRAFT_121202 Botryobasidium botryosum BOTBODRAFT_121202 I 0.000
CADAFLAG00001438 Aspergillus flavus CADAFLAG00001438 I 0.000
CADANGAG00002744 Aspergillus niger CADANGAG00002744 I 0.000
CADAORAG00003304 Aspergillus oryzae CADAORAG00003304 I 0.000
CAGL0H05621g Candida glabrata CAGL0H05621g I 0.000
CAGL0M06325g Candida glabrata CAGL0M06325g N 0.000
CANTEDRAFT_125008 Candida tenuis CANTEDRAFT_125008 I 0.000
CaO19.12132 Candida albicans CaO19.12132 I 0.000
CaO19.4662 Candida albicans CaO19.4662 I 0.000
CD36_41250 Candida dubliniensis CD36_41250 I 0.000
CFIO01_13635 Colletotrichum fioriniae CFIO01_13635 I 0.000
CH063_12469 Colletotrichum higginsianum CH063_12469 I 0.000
CIMG_07638 Coccidioides immitis CIMG_07638 I 0.000
CLUG_04340 Candida lusitaniae CLUG_04340 I 0.000
CLUG_04340 Clavispora lusitaniae CLUG_04340 I 0.000
CMQ_3522 Grosmannia clavigera CMQ_3522 I 0.000
Cob_13332 Colletotrichum orbiculare Cob_13332 I 0.000
COCC4DRAFT_131332 Bipolaris maydis COCC4DRAFT_131332 I 0.000
COCCADRAFT_38888 Bipolaris zeicola COCCADRAFT_38888 I 0.000
COCMIDRAFT_27992 Bipolaris oryzae COCMIDRAFT_27992 I 0.000
COCSADRAFT_191180 Bipolaris sorokiniana COCSADRAFT_191180 I 0.000
COCVIDRAFT_17132 Bipolaris victoriae COCVIDRAFT_17132 I 0.000
CORT_0E04370 Candida orthopsilosis CORT_0E04370 I 0.000
CPAG_01728 Candida parapsilosis CPAG_01728 I 0.000
CPC735_043100 Coccidioides posadasii CPC735_043100 I 0.000
CSUB01_02910 Colletotrichum sublineola CSUB01_02910 I 0.000
CTRG_00027 Candida tropicalis CTRG_00027 I 0.000
DEHA2B02882g Debaryomyces hansenii DEHA2B02882g I 0.000
DOTSEDRAFT_71657 Dothistroma septosporum DOTSEDRAFT_71657 I 0.000
Ecym_7060 Eremothecium cymbalariae Ecym_7060 I 0.000
EPUS_00923 Endocarpon pusillum EPUS_00923 I 0.000
estExt_fgenesh1_pm.C_110082 Mycosphaerella fijiensis estExt_fgenesh1_pm.C_110082 I 0.000
estExt_fgenesh1_pm.C_30002 Cochliobolus heterostrophus C5 estExt_fgenesh1_pm.C_30002 I 0.000
estExt_fgenesh2_pg.C_20596 Neurospora discreta estExt_fgenesh2_pg.C_20596 I 0.000
estExt_genewise1_human.C_chr_1.10329 Pichia stipitis estExt_genewise1_human.C_chr_1.10329 I 0.000
EURHEDRAFT_408541 Aspergillus ruber EURHEDRAFT_408541 I 0.000
EV44_g2988 Erysiphe necator EV44_g2988 I 0.000
F503_03505 Ophiostoma piceae uamh F503_03505 I 0.000
fgenesh1_pm.00866_#_723 Aspergillus carbonarius fgenesh1_pm.00866_#_723 I 0.000
G210_1171 Candida maltosa G210_1171 I 0.000
G647_03030 Cladophialophora carrionii G647_03030 I 0.000
GLRG_00647 Colletotrichum graminicola GLRG_00647 I 0.000
GMDG_00759 Pseudogymnoascus destructans GMDG_00759 I 0.000
GNLVRS01_PISO0M22936g Millerozyma farinosa GNLVRS01_PISO0M22936g I 0.000
GNLVRS01_PISO0N23201g Millerozyma farinosa GNLVRS01_PISO0N23201g I 0.000
GSTUM_00008714001 Tuber melanosporum GSTUM_00008714001 I 0.000
H101_08129 Trichophyton interdigitale H101_08129 I 0.000
H102_05233 Trichophyton rubrum H102_05233 I 0.000
H105_05252 Trichophyton soudanense H105_05252 I 0.000
HCBG_00204 Histoplasma capsulatum HCBG_00204 I 0.000
HMPREF1120_02025 Exophiala dermatitidis HMPREF1120_02025 I 0.000
HMPREF1541_07944 Cyphellophora europaea HMPREF1541_07944 I 0.000
HMPREF1624_03092 Sporothrix schenckii HMPREF1624_03092 I 0.000
HPODL_00493 Ogataea parapolymorpha HPODL_00493 I 0.000
JL09_g2233 Pichia kudriavzevii JL09_g2233 I 0.000
KAFR_0E00800 Kazachstania africana KAFR_0E00800 I 0.000
KAFR_0I00730 Kazachstania africana KAFR_0I00730 I 0.000
KLLA0_E24025g Kluyveromyces lactis KLLA0_E24025g I 0.000
KLTH0E13156g Lachancea thermotolerans KLTH0E13156g I 0.000
KLTH0E13156g Kluyveromyces thermotolerans KLTH0E13156g I 0.000
KNAG_0A01830 Kazachstania naganishii KNAG_0A01830 I 0.000
Kpol_1048p48 Vanderwaltozyma polyspora Kpol_1048p48 I 0.000
Kpol_397p4 Vanderwaltozyma polyspora Kpol_397p4 I 0.000
KUCA_T00000739001 Kuraishia capsulata KUCA_T00000739001 I 0.000
LALA0_S04e02938g Lachancea lanzarotensis LALA0_S04e02938g I 0.000
LELG_04554 Lodderomyces elongisporus LELG_04554 I 0.000
LEMA_P028590.1 Leptosphaeria maculans LEMA_P028590.1 I 0.000
M437DRAFT_42083 Aureobasidium melanogenum M437DRAFT_42083 I 0.000
M438DRAFT_316511 Aureobasidium pullulans M438DRAFT_316511 I 0.000
MCYG_04979 Microsporum canis MCYG_04979 I 0.000
MCYG_04979 Arthroderma otae MCYG_04979 I 0.000
MGYG_07902 Microsporum gypseum MGYG_07902 I 0.000
Moror_4352 Moniliophthora roreri Moror_4352 N 0.000
MPH_05126 Macrophomina phaseolina MPH_05126 I 0.000
MYCFIDRAFT_72135 Pseudocercospora fijiensis MYCFIDRAFT_72135 I 0.000
Mycgr3G71585 Zymoseptoria tritici Mycgr3G71585 I 0.000
NCAS_0B02030 Naumovozyma castellii NCAS_0B02030 I 0.000
NCAS_0C01980 Naumovozyma castellii NCAS_0C01980 I 0.000
NCU02558 Neurospora crassa NCU02558 I 0.000
NDAI_0C05650 Naumovozyma dairenensis NDAI_0C05650 N 0.000
NDAI_0E02700 Naumovozyma dairenensis NDAI_0E02700 I 0.000
NEUTE1DRAFT_126496 Neurospora tetrasperma NEUTE1DRAFT_126496 I 0.000
NFIA_068610 Neosartorya fischeri CADNFIAG00006321 I 0.000
OIDMADRAFT_105313 Oidiodendron maius OIDMADRAFT_105313 I 0.000
PAAG_00645 Paracoccidioides sp lutzii PAAG_00645 I 0.000
PABG_01574 Paracoccidioides brasiliensis PABG_01574 I 0.000
PAS_chr4_0093 Komagataella pastoris PAS_chr4_0093 I 0.000
Pc20g03270 Penicillium chrysogenum Pc20g03270 I 0.000
PCH_Pc20g03270 Penicillium rubens PCH_Pc20g03270 I 0.000
PDE_01919 Penicillium oxalicum PDE_01919 I 0.000
PDIP_09010 Penicillium digitatum PDIP_09010 I 0.000
PEX1_000400 Penicillium expansum PEX1_000400 I 0.000
PFICI_06921 Pestalotiopsis fici PFICI_06921 I 0.000
PGUG_02571 Candida guilliermondii PGUG_02571 I 0.000
PGUG_02571 Meyerozyma guilliermondii PGUG_02571 I 0.000
PICST_68747 Scheffersomyces stipitis PICST_68747 I 0.000
PITC_001660 Penicillium italicum PITC_001660 I 0.000
PMAA_013140 Talaromyces marneffei PMAA_013140 I 0.000
PMAA_013140 Penicillium marneffei PMAA_013140 I 0.000
PODANS_1_6600 Podospora anserina PODANS_1_6600 I 0.000
PTRG_08080 Pyrenophora triticirepentis PTRG_08080 I 0.000
PTT_15886 Pyrenophora teres PTT_15886 I 0.000
PV04_07501 Capronia semiimmersa PV04_07501 I 0.000
PV05_05426 Exophiala xenobiotica PV05_05426 I 0.000
PV06_00786 Exophiala oligosperma PV06_00786 I 0.000
PV07_11277 Cladophialophora immunda PV07_11277 I 0.000
PV08_00691 Exophiala spinifera PV08_00691 I 0.000
PV09_04800 Verruconis gallopava PV09_04800 I 0.000
PV10_07771 Exophiala mesophila PV10_07771 I 0.000
PV11_00659 Exophiala sideris PV11_00659 I 0.000
PVAR5_5878 Byssochlamys spectabilis PVAR5_5878 I 0.000
RLM1 Saccharomyces cerevisiae YPL089C D 0.000
SAKL0H09416g Lachancea kluyveri SAKL0H09416g I 0.000
SAPIO_CDS1437 Scedosporium apiospermum SAPIO_CDS1437 I 0.000
SBOR_4659 Sclerotinia borealis SBOR_4659 I 0.000
Scas_Contig721.17 Saccharomyces castellii Scas_Contig721.17 I 0.000
Scas_Contig721.18 Saccharomyces castellii Scas_Contig721.18 I 0.000
SEPMUDRAFT_148874 Sphaerulina musiva SEPMUDRAFT_148874 I 0.000
SETTUDRAFT_183592 Setosphaeria turcica SETTUDRAFT_183592 I 0.000
SKUD_178506 Saccharomyces kudriavzevii SKUD_178506 I 0.000
SKUD_205813 Saccharomyces kudriavzevii SKUD_205813 I 0.000
SMAC_05802 Sordaria macrospora SMAC_05802 I 0.000
SMP1 Saccharomyces cerevisiae YBR182C D 0.000
SNOG_15194 Stagonospora nodorum SNOG_15194 I 0.000
SPBR_01444 Sporothrix brasiliensis SPBR_01444 I 0.000
SS1G_06124 Sclerotinia sclerotiorum SS1G_06124 I 0.000
SU7_0243 Saccharomyces arboricola SU7_0243 I 0.000
SU7_3566 Saccharomyces arboricola SU7_3566 I 0.000
TBLA_0B04500 Tetrapisispora blattae TBLA_0B04500 N 0.000
TBLA_0H03770 Tetrapisispora blattae TBLA_0H03770 I 0.000
TDEL_0A05090 Torulaspora delbrueckii TDEL_0A05090 I 0.000
TEQG_02757 Trichophyton equinum TEQG_02757 I 0.000
TESG_06676 Trichophyton tonsurans TESG_06676 I 0.000
THITE_2122084 Thielavia terrestris THITE_2122084 I 0.000
TPHA_0A01340 Tetrapisispora phaffii TPHA_0A01340 I 0.000
TRV_06898 Trichophyton verrucosum TRV_06898 I 0.000
TSTA_004010 Talaromyces stipitatus TSTA_004010 I 0.000
U727_00434011531 Penicillium solitum U727_00434011531 I 0.000
UCRNP2_3485 Neofusicoccum parvum UCRNP2_3485 I 0.000
UCRPA7_1246 Togninia minima UCRPA7_1246 I 0.000
UREG_07644 Uncinocarpus reesii UREG_07644 I 0.000
V499_02013 Pseudogymnoascus pannorum V499_02013 I 0.000
V565_186740 Rhizoctonia solani V565_186740 I 0.000
W97_01089 Coniosporium apollinis W97_01089 I 0.000
XP_002493499.1 Pichia pastoris XP_002493499.1 I 0.000
YALI0_F18788g Yarrowia lipolytica YALI0_F18788g I 0.000
Z517_02667 Fonsecaea pedrosoi Z517_02667 I 0.000
Z518_09438 Rhinocladiella mackenziei Z518_09438 I 0.000
Z519_11638 Cladophialophora bantiana Z519_11638 I 0.000
ZYRO0A13464g Zygosaccharomyces rouxii ZYRO0A13464g I 0.000