CBN24586 (Caenorhabditis brenneri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CBN24586 T083065_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
pat-9
M00620_2.00 		Caenorhabditis elegans
NDKTKTAAHN
NDTTAMAMHN		 PBM
Narasimhan et al.(2015)
pTH10808 		0.827 0.978
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN24586 C2H2 ZF 83 105
CBN24586 C2H2 ZF 111 133

Links

Other C2H2 ZF family TFs
Other Caenorhabditis brenneri TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACOC_0000102201 Angiostrongylus costaricensis ACOC_0000102201 I 0.821
ANCCAN_18583 Ancylostoma caninum ANCCAN_18583 I 0.821
ANCDUO_07563 Ancylostoma duodenale ANCDUO_07563 I 0.821
BXY_0112400 Bursaphelenchus xylophilus BXY_0112400 I 0.809
CBG16356 Caenorhabditis briggsae CBG16356 I 0.827
CJA18352 Caenorhabditis japonica CJA18352 I 0.827
CRE27649 Caenorhabditis remanei CRE27649 I 0.827
DICVIV_12412 Dictyocaulus viviparus DICVIV_12412 I 0.821
EVEC_0000241401 Enterobius vermicularis EVEC_0000241401 I 0.786
genemark-nMf.1.1.scaf00221-processed-gene-0.5 Meloidogyne floridensis genemark-nMf.1.1.scaf00221-processed-gene-0.5 I 0.791
GPLIN_000449900 Globodera pallida GPLIN_000449900 I 0.785
Hba_14230 Heterorhabditis bacteriophora Hba_14230 I 0.821
HCOI01651000 Haemonchus contortus HCOI01651000 I 0.821
HPBE_0000071201 Heligmosomoides bakeri HPBE_0000071201 I 0.821
MhA1_Contig1798.frz3.fgene1 Meloidogyne hapla MhA1_Contig1798.frz3.fgene1 I 0.791
nLs.2.1.2.g04320 Litomosoides sigmodontis nLs.2.1.2.g04320 I 0.786
nOo.2.0.1.g07915 Onchocerca ochengi nOo.2.0.1.g07915 I 0.786
OESDEN_00376 Oesophagostomum dentatum OESDEN_00376 I 0.821
pat-9 Caenorhabditis elegans WBGene00003933 D 0.827
Ppa-ztf-19 Pristionchus pacificus PPA23683 I 0.815
PTRK_0000759200 Parastrongyloides trichosuri PTRK_0000759200 I 0.796
RSKR_0001095800 Rhabditophanes kr3021 RSKR_0001095800 I 0.815
scaffold450-EXSNAP2012.3 Pristionchus exspectatus scaffold450-EXSNAP2012.3 I 0.815
SMUV_0001033801 Syphacia muris SMUV_0001033801 I 0.781
SPAL_0001716000 Strongyloides papillosus SPAL_0001716000 I 0.796
SSTP_0001017800 Strongyloides stercoralis SSTP_0001017800 I 0.796
SVE_0378000 Strongyloides venezuelensis SVE_0378000 I 0.796
TCLT_0000966901 Thelazia callipaeda TCLT_0000966901 I 0.786
TELCIR_02513 Teladorsagia circumcincta TELCIR_02513 I 0.821
WBGene00238928 Onchocerca volvulus WBGene00238928 I 0.786