HCOI01651000 (Haemonchus contortus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 HCOI01651000 T153858_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
pat-9
M00620_2.00 		Caenorhabditis elegans
NDKTKTAAHN
NDTTAMAMHN		 PBM
Narasimhan et al.(2015)
pTH10808 		0.821 0.913
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HCOI01651000.t1 C2H2 ZF 83 105
HCOI01651000.t1 C2H2 ZF 111 133
HCOI01651000.t2 C2H2 ZF 83 105
HCOI01651000.t2 C2H2 ZF 111 133
HCOI01651000.t3 C2H2 ZF 83 105
HCOI01651000.t3 C2H2 ZF 111 133

Links

Other C2H2 ZF family TFs
Other Haemonchus contortus TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DICVIV_12412 Dictyocaulus viviparus DICVIV_12412 I 0.827
ANCDUO_07563 Ancylostoma duodenale ANCDUO_07563 I 0.827
HPBE_0000071201 Heligmosomoides bakeri HPBE_0000071201 I 0.827
TELCIR_02513 Teladorsagia circumcincta TELCIR_02513 I 0.827
OESDEN_00376 Oesophagostomum dentatum OESDEN_00376 I 0.827
ANCCAN_18583 Ancylostoma caninum ANCCAN_18583 I 0.827
Hba_14230 Heterorhabditis bacteriophora Hba_14230 I 0.827
ACOC_0000102201 Angiostrongylus costaricensis ACOC_0000102201 I 0.827
CRE27649 Caenorhabditis remanei CRE27649 I 0.821
CJA18352 Caenorhabditis japonica CJA18352 I 0.821
scaffold450-EXSNAP2012.3 Pristionchus exspectatus scaffold450-EXSNAP2012.3 I 0.821
CBG16356 Caenorhabditis briggsae CBG16356 I 0.821
Ppa-ztf-19 Pristionchus pacificus PPA23683 I 0.821
CBN24586 Caenorhabditis brenneri CBN24586 I 0.821
pat-9 Caenorhabditis elegans WBGene00003933 D 0.821
RSKR_0001095800 Rhabditophanes kr3021 RSKR_0001095800 I 0.815
BXY_0112400 Bursaphelenchus xylophilus BXY_0112400 I 0.815
genemark-nMf.1.1.scaf00221-processed-gene-0.5 Meloidogyne floridensis genemark-nMf.1.1.scaf00221-processed-gene-0.5 I 0.797
MhA1_Contig1798.frz3.fgene1 Meloidogyne hapla MhA1_Contig1798.frz3.fgene1 I 0.797
SSTP_0001017800 Strongyloides stercoralis SSTP_0001017800 I 0.796
PTRK_0000759200 Parastrongyloides trichosuri PTRK_0000759200 I 0.796
SVE_0378000 Strongyloides venezuelensis SVE_0378000 I 0.796
SPAL_0001716000 Strongyloides papillosus SPAL_0001716000 I 0.796
GPLIN_000449900 Globodera pallida GPLIN_000449900 I 0.791
TCLT_0000966901 Thelazia callipaeda TCLT_0000966901 I 0.786
nLs.2.1.2.g04320 Litomosoides sigmodontis nLs.2.1.2.g04320 I 0.786
WBGene00238928 Onchocerca volvulus WBGene00238928 I 0.786
EVEC_0000241401 Enterobius vermicularis EVEC_0000241401 I 0.786
nOo.2.0.1.g07915 Onchocerca ochengi nOo.2.0.1.g07915 I 0.786
SMUV_0001033801 Syphacia muris SMUV_0001033801 I 0.781