CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CJA14382
(
Caenorhabditis japonica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CJA14382
T083777_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
bnc-1
M00648_2.00
Caenorhabditis elegans
YGTCVHNNN
NNNDBGACR
PBM
Narasimhan et al.(2015)
pTH10026
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA14382
C2H2 ZF
108
130
ACDICSKSFCDKGALKIHTSAVH
CJA14382
C2H2 ZF
135
158
HTCTVAGCGKQFSSRRSRNRHSSN
Links
Other
C2H2 ZF
family TFs
Other
Caenorhabditis japonica
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
bnc-1
Caenorhabditis elegans
WBGene00044791
D
0.827
BXY_1034900
Bursaphelenchus xylophilus
BXY_1034900
I
0.771
CBN18182
Caenorhabditis brenneri
CBN18182
I
0.817
CBN30821
Caenorhabditis brenneri
CBN30821
I
0.817
CRE27386
Caenorhabditis remanei
CRE27386
I
0.827