bnc-1 (Caenorhabditis elegans)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 WBGene00044791 T131651_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
bnc-1
M00648_2.00		 Caenorhabditis elegans
YGTCVHNNN
NNNDBGACR		 PBM
Narasimhan et al.(2015)
pTH10026		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00648_2.00 C2H2 ZF 51 73
M00648_2.00 C2H2 ZF 78 101

DNA Binding Domains

Protein ID Domain From To Sequence
F55C5.11 C2H2 ZF 108 130
F55C5.11 C2H2 ZF 135 158

Links

Other C2H2 ZF family TFs
Other Caenorhabditis elegans TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CJA14382 Caenorhabditis japonica CJA14382 I 0.827
CRE27386 Caenorhabditis remanei CRE27386 I 0.827
CBN18182 Caenorhabditis brenneri CBN18182 I 0.817
CBN30821 Caenorhabditis brenneri CBN30821 I 0.817
BXY_1034900 Bursaphelenchus xylophilus BXY_1034900 I 0.771