CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE27386
(
Caenorhabditis remanei
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CRE27386
T085074_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
bnc-1
M00648_2.00
Caenorhabditis elegans
YGTCVHNNN
NNNDBGACR
PBM
Narasimhan et al.(2015)
pTH10026
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE27386
C2H2 ZF
110
132
ACDICSKSFCDKGALKIHTSAVH
CRE27386
C2H2 ZF
137
160
HTCTVTGCGKQFSSRRSRNRHSSN
Links
Other
C2H2 ZF
family TFs
Other
Caenorhabditis remanei
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CJA14382
Caenorhabditis japonica
CJA14382
I
0.827
bnc-1
Caenorhabditis elegans
WBGene00044791
D
0.827
CBN18182
Caenorhabditis brenneri
CBN18182
I
0.817
CBN30821
Caenorhabditis brenneri
CBN30821
I
0.817
BXY_1034900
Bursaphelenchus xylophilus
BXY_1034900
I
0.771