BCL11B (Bos taurus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSBTAG00000018019 T087949_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11B
M04453_2.00 		Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX 		0.827 1.000
BCL11B
M04454_2.00 		Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX 		0.827 1.000
BCL11A
M07926_2.00 		Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV		 ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha 		0.806 0.947
BCL11A
M08881_2.00 		Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV		 Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A 		0.806 0.947
BCL11A
M10187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL11A_02 		0.806 0.947
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000023987 C2H2 ZF 429 450
ENSBTAP00000023987 C2H2 ZF 456 478
ENSBTAP00000023987 C2H2 ZF 806 828
ENSBTAP00000023987 C2H2 ZF 834 856
ENSBTAP00000023987 C2H2 ZF 864 887

Links

Other C2H2 ZF family TFs
Other Bos taurus TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI2G31887 Brachypodium distachyon BRADI2G31887 I 0.000
Ciclev10007316m.g Citrus clementina Ciclev10007316m.g I 0.000
Cla022565 Citrullus lanatus Cla022565 I 0.000
Cla023357 Citrullus lanatus Cla023357 I 0.000
Cucsa.161430 Cucumis sativus Cucsa.161430 I 0.000
Cucsa.311420 Cucumis sativus Cucsa.311420 I 0.000
Eucgr.C02893 Eucalyptus grandis Eucgr.C02893 I 0.000
evm.TU.supercontig_78.76 Carica papaya evm.TU.supercontig_78.76 I 0.000
F775_05724 Aegilops tauschii F775_05724 I 0.000
gene08793-v1.0-hybrid Fragaria vesca gene08793-v1.0-hybrid I 0.000
GSMUA_Achr10G14840_001 Musa acuminata GSMUA_Achr10G14840_001 I 0.000
GSMUA_Achr2G19890_001 Musa acuminata GSMUA_Achr2G19890_001 I 0.000
LjT22I05.60.nd Lotus japonicus LjT22I05.60.nd I 0.000
Lus10022136.g Linum usitatissimum Lus10022136.g I 0.000
MDP0000179225 Malus domestica MDP0000179225 I 0.000
MDP0000295807 Malus domestica MDP0000295807 I 0.000
MLOC_10556 Hordeum vulgare MLOC_10556 I 0.000
OB01G18340 Oryza brachyantha OB01G18340 I 0.000
OB12G16480 Oryza brachyantha OB12G16480 I 0.000
OBART01G08110 Oryza barthii OBART01G08110 I 0.000
OGLUM01G09290 Oryza glumaepatula OGLUM01G09290 I 0.000
OLONG_011886 Oryza longistaminata OLONG_011886 I 0.000
OMERI01G08160 Oryza meridionalis OMERI01G08160 I 0.000
ONIVA01G10670 Oryza nivara ONIVA01G10670 I 0.000
OPUNC01G07980 Oryza punctata OPUNC01G07980 I 0.000
OPUNC01G08000 Oryza punctata OPUNC01G08000 I 0.000
ORGLA01G0073200 Oryza glaberrima ORGLA01G0073200 I 0.000
ORGLA12G0066300 Oryza glaberrima ORGLA12G0066300 I 0.000
ORUFI01G08920 Oryza rufipogon ORUFI01G08920 N 0.000
OS12G0238000 Oryza sativa OS12G0238000 I 0.000
Pavir.Ea00087 Panicum virgatum Pavir.Ea00087 I 0.000
Pavir.Eb00149 Panicum virgatum Pavir.Eb00149 I 0.000
Pavir.J07395 Panicum virgatum Pavir.J07395 I 0.000
Pm005124 Prunus mume Pm005124 I 0.000
POPTR_0006s25840 Populus trichocarpa POPTR_0006s25840 I 0.000
POPTR_0018s00710 Populus trichocarpa POPTR_0018s00710 I 0.000
PRUPE_ppa000676mg Prunus persica PRUPE_ppa000676mg I 0.000
SapurV1A.0283s0180 Salix purpurea SapurV1A.0283s0180 I 0.000
TRAES3BF049800070CFD_g Triticum aestivum TRAES3BF049800070CFD_g I 0.000
Traes_1AS_61D017632 Triticum aestivum Traes_1AS_61D017632 I 0.000
Traes_1BS_403DBC53C Triticum aestivum Traes_1BS_403DBC53C I 0.000
Traes_3AS_09025DA2E Triticum aestivum Traes_3AS_09025DA2E I 0.000
TRIUR3_24658 Triticum urartu TRIUR3_24658 I 0.000
VIT_11s0016g03750 Vitis vinifera VIT_11s0016g03750 I 0.000