OGLUM01G09290 (Oryza glumaepatula)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OGLUM01G09290 T275634_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q948S5_TOBAC
M11074_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA2_01 		0.757 0.842
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.748 0.791
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.748 0.791
PK12011.1
M01279_2.00 		Cannabis sativa
HAACGGHHNN
NNDDCCGTTD		 PBM
Lambert et al.(2019)
pTH11423 		0.726 0.835
MYB3R4
M07125_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R4_col_a 		0.710 0.784
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM01G09290.1 Myb 51 97
OGLUM01G09290.1 Myb 103 149
OGLUM01G09290.1 Myb 155 199
OGLUM01G09290.2 Myb 38 79
OGLUM01G09290.2 Myb 85 131
OGLUM01G09290.2 Myb 137 181

Links

Other Myb/SANT family TFs
Other Oryza glumaepatula TFs

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OBART01G08110 Oryza barthii OBART01G08110 I 0.909
OLONG_011886 Oryza longistaminata OLONG_011886 I 0.909
OMERI01G08160 Oryza meridionalis OMERI01G08160 I 0.909
ONIVA01G10670 Oryza nivara ONIVA01G10670 I 0.909
OPUNC01G07980 Oryza punctata OPUNC01G07980 I 0.901
OPUNC01G08000 Oryza punctata OPUNC01G08000 I 0.901
Traes_3AS_09025DA2E Triticum aestivum Traes_3AS_09025DA2E I 0.889
TRAES3BF049800070CFD_g Triticum aestivum TRAES3BF049800070CFD_g I 0.889
Pavir.Ea00087 Panicum virgatum Pavir.Ea00087 I 0.888
Pavir.Eb00149 Panicum virgatum Pavir.Eb00149 I 0.888
OB01G18340 Oryza brachyantha OB01G18340 I 0.886
OB12G16480 Oryza brachyantha OB12G16480 I 0.882
ORGLA12G0066300 Oryza glaberrima ORGLA12G0066300 I 0.882
ORGLA01G0073200 Oryza glaberrima ORGLA01G0073200 I 0.878
OS12G0238000 Oryza sativa OS12G0238000 I 0.876
TRIUR3_24658 Triticum urartu TRIUR3_24658 I 0.860
F775_05724 Aegilops tauschii F775_05724 I 0.859
MLOC_10556 Hordeum vulgare MLOC_10556 I 0.842
Pavir.J07395 Panicum virgatum Pavir.J07395 I 0.799
GSMUA_Achr2G19890_001 Musa acuminata GSMUA_Achr2G19890_001 I 0.796
PRUPE_ppa000676mg Prunus persica PRUPE_ppa000676mg I 0.792
Lus10022136.g Linum usitatissimum Lus10022136.g I 0.790
MDP0000295807 Malus domestica MDP0000295807 I 0.789
Traes_1AS_61D017632 Triticum aestivum Traes_1AS_61D017632 I 0.775
gene08793-v1.0-hybrid Fragaria vesca gene08793-v1.0-hybrid I 0.774
Pm005124 Prunus mume Pm005124 I 0.773
Traes_1BS_403DBC53C Triticum aestivum Traes_1BS_403DBC53C I 0.772
evm.TU.supercontig_78.76 Carica papaya evm.TU.supercontig_78.76 I 0.772
MDP0000179225 Malus domestica MDP0000179225 I 0.770
LjT22I05.60.nd Lotus japonicus LjT22I05.60.nd I 0.769
BRADI2G31887 Brachypodium distachyon BRADI2G31887 I 0.767
Ciclev10007316m.g Citrus clementina Ciclev10007316m.g I 0.767
GSMUA_Achr10G14840_001 Musa acuminata GSMUA_Achr10G14840_001 I 0.764
Cla022565 Citrullus lanatus Cla022565 I 0.758
Cucsa.161430 Cucumis sativus Cucsa.161430 I 0.758
Eucgr.C02893 Eucalyptus grandis Eucgr.C02893 I 0.758
SapurV1A.0283s0180 Salix purpurea SapurV1A.0283s0180 I 0.758
Q948S5_TOBAC Nicotiana tabacum Q948S5_TOBAC D 0.757
PC-MYB1 Arabidopsis thaliana AT4G32730 D 0.756
PC-MYB1 Arabidopsis lyrata fgenesh2_kg.7__866__AT4G32730.2 I 0.756
POPTR_0006s25840 Populus trichocarpa POPTR_0006s25840 I 0.756
POPTR_0018s00710 Populus trichocarpa POPTR_0018s00710 I 0.756
Cla023357 Citrullus lanatus Cla023357 I 0.756
Cucsa.311420 Cucumis sativus Cucsa.311420 I 0.756
Bostr.7867s1124 Boechera stricta Bostr.7867s1124 I 0.756
mgf008601m Mimulus guttatus mgf008601m I 0.755
Solyc08g068320.2 Solanum lycopersicum Solyc08g068320.2 I 0.754
29794.m003447 Ricinus communis 29794.m003447 I 0.752
GLYMA04G08550 Glycine max GLYMA04G08550 I 0.751
GLYMA06G08660 Glycine max GLYMA06G08660 I 0.751
Bo3g171130 Brassica oleracea Bo3g171130 I 0.750
Bra034531 Brassica rapa Bra034531 I 0.750
VIT_11s0016g03750 Vitis vinifera VIT_11s0016g03750 I 0.750
MTR_3g110028 Medicago truncatula MTR_3g110028 I 0.749
Aquca_001_00435 Aquilegia coerulea Aquca_001_00435 I 0.749
Ca_14925 Cicer arietinum Ca_14925 I 0.748
Bo7g115810 Brassica oleracea Bo7g115810 I 0.747
Sb09g007370 Sorghum bicolor Sb09g007370 N 0.743
TCM_047091 Theobroma cacao TCM_047091 I 0.739
Gorai.009G051000 Gossypium raimondii Gorai.009G051000 I 0.736
Thhalv10024320m.g Eutrema salsugineum Thhalv10024320m.g I 0.735
OPUNC12G06560 Oryza punctata OPUNC12G06560 N 0.732
Gorai.010G110000 Gossypium raimondii Gorai.010G110000 I 0.732
MTR_1g026870 Medicago truncatula MTR_1g026870 I 0.731
GLYMA17G26240 Glycine max GLYMA17G26240 I 0.729
BRADI2G07677 Brachypodium distachyon BRADI2G07677 N 0.727
SapurV1A.0446s0220 Salix purpurea SapurV1A.0446s0220 I 0.726
PK12011.1 Cannabis sativa PK12011.1 D 0.726
Bo1g010040 Brassica oleracea Bo1g010040 I 0.725
Bra011376 Brassica rapa Bra011376 I 0.725
ORUFI01G08920 Oryza rufipogon ORUFI01G08920 N 0.725
GLYMA14G21523 Glycine max GLYMA14G21523 I 0.722
Gorai.001G028200 Gossypium raimondii Gorai.001G028200 I 0.720
Bra037045 Brassica rapa Bra037045 I 0.718
PK22174.1 Cannabis sativa PK22174.1 I 0.718
AMTR_s00009p00263240 Amborella trichopoda AMTR_s00009p00263240 I 0.713
VIT_04s0008g03780 Vitis vinifera VIT_04s0008g03780 I 0.713
Ca_01884 Cicer arietinum Ca_01884 I 0.712
MYB3R4 Arabidopsis thaliana AT5G11510 D 0.710
Bo9g171130 Brassica oleracea Bo9g171130 I 0.710
Bra008956 Brassica rapa Bra008956 I 0.710
MYB3R-4 Arabidopsis lyrata fgenesh2_kg.6__1121__AT5G11510.1 I 0.710
Bostr.20055s0087 Boechera stricta Bostr.20055s0087 I 0.710
Bo3g007070 Brassica oleracea Bo3g007070 I 0.704
Bo3g179620 Brassica oleracea Bo3g179620 I 0.704
Thhalv10012583m.g Eutrema salsugineum Thhalv10012583m.g I 0.704
Bra006102 Brassica rapa Bra006102 I 0.703
mgf006384m Mimulus guttatus mgf006384m I 0.703
BGIOSGA017917 Oryza indica BGIOSGA017917 I 0.702
OBART05G19200 Oryza barthii OBART05G19200 I 0.702
ONIVA05G20060 Oryza nivara ONIVA05G20060 I 0.702
ORUFI05G20390 Oryza rufipogon ORUFI05G20390 I 0.702
Cagra.4093s0003 Capsella grandiflora Cagra.4093s0003 I 0.700
Carubv10004063m.g Capsella rubella Carubv10004063m.g I 0.700
Si021484m.g Setaria italica Si021484m.g I 0.698
OGLUM01G40780 Oryza glumaepatula OGLUM01G40780 I 0.695
ORGLA01G0306500 Oryza glaberrima ORGLA01G0306500 I 0.695
MYB3R-2 Oryza sativa OS01G0841500 I 0.695
Aquca_013_00366 Aquilegia coerulea Aquca_013_00366 I 0.694
Cagra.7526s0003 Capsella grandiflora Cagra.7526s0003 I 0.694
Carubv10000155m.g Capsella rubella Carubv10000155m.g I 0.694
Si000842m.g Setaria italica Si000842m.g I 0.693
Pavir.Ea03349 Panicum virgatum Pavir.Ea03349 I 0.693
Pavir.Eb03676 Panicum virgatum Pavir.Eb03676 I 0.693
PDK_20s1371143g001 Phoenix dactylifera PDK_20s1371143g001 I 0.690
OB05G26770 Oryza brachyantha OB05G26770 N 0.689
Traes_1BL_C25B5DDB4 Triticum aestivum Traes_1BL_C25B5DDB4 I 0.689
OPUNC05G16800 Oryza punctata OPUNC05G16800 I 0.688
AMTR_s00109p00061950 Amborella trichopoda AMTR_s00109p00061950 I 0.687
Traes_1DL_B26A733D4 Triticum aestivum Traes_1DL_B26A733D4 I 0.686
POPTR_0006s08570 Populus trichocarpa POPTR_0006s08570 I 0.685
TRIUR3_29290 Triticum urartu TRIUR3_29290 I 0.683
SapurV1A.0001s1810 Salix purpurea SapurV1A.0001s1810 I 0.683
e_gw1.36.4.1 Physcomitrella patens e_gw1.36.4.1 I 0.681
ORGLA05G0166300 Oryza glaberrima ORGLA05G0166300 I 0.680
OS05G0459000 Oryza sativa OS05G0459000 I 0.680
PRUPE_ppa022218mg Prunus persica PRUPE_ppa022218mg I 0.679
Sb03g039470 Sorghum bicolor Sb03g039470 I 0.679
Pm018007 Prunus mume Pm018007 I 0.679
Lus10024394.g Linum usitatissimum Lus10024394.g I 0.679
Lus10025351.g Linum usitatissimum Lus10025351.g I 0.679
Ciclev10011452m.g Citrus clementina Ciclev10011452m.g I 0.677
orange1.1g009402m.g Citrus sinensis orange1.1g009402m.g I 0.677
e_gw1.120.1.1 Physcomitrella patens e_gw1.120.1.1 I 0.675
F775_10106 Aegilops tauschii F775_10106 I 0.673
MYB3R-3 Arabidopsis thaliana AT3G09370 I 0.672
fgenesh1_pg.C_scaffold_3000839 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000839 I 0.672
Gorai.006G172800 Gossypium raimondii Gorai.006G172800 I 0.672
gene18416-v1.0-hybrid Fragaria vesca gene18416-v1.0-hybrid I 0.671
GRMZM2G081919 Zea mays GRMZM2G081919 I 0.668
TCM_005402 Theobroma cacao TCM_005402 I 0.666
Cla018173 Citrullus lanatus Cla018173 I 0.666
Bostr.6251s0040 Boechera stricta Bostr.6251s0040 I 0.666
OB01G45570 Oryza brachyantha OB01G45570 I 0.665
GSMUA_Achr10G26610_001 Musa acuminata GSMUA_Achr10G26610_001 I 0.664
Thhalv10020579m.g Eutrema salsugineum Thhalv10020579m.g I 0.664
LPERR01G31650 Leersia perrieri LPERR01G31650 I 0.663
Solyc11g071300.1 Solanum lycopersicum Solyc11g071300.1 I 0.663
Traes_3AL_386795528 Triticum aestivum Traes_3AL_386795528 I 0.663
TRAES3BF104600030CFD_g Triticum aestivum TRAES3BF104600030CFD_g I 0.663
Traes_3DL_6BBC889A1 Triticum aestivum Traes_3DL_6BBC889A1 I 0.663
MDP0000219581 Malus domestica MDP0000219581 I 0.661