CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM01G40780
(
Oryza glumaepatula
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
OGLUM01G40780
T275651_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB3R5
M07116_2.00
Arabidopsis thaliana
NWWWWNTDRCCGTTR
YAACGGYHANWWWWN
Dap-seq
OMalley et al.(2016)
MYB3R5_col_a
0.746
0.879
PK12011.1
M01279_2.00
Cannabis sativa
HAACGGHHNN
NNDDCCGTTD
PBM
Lambert et al.(2019)
pTH11423
0.724
0.793
PC-MYB1
M07110_2.00
Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN
Dap-seq
OMalley et al.(2016)
MYB3R1_col_a
0.721
0.779
PC-MYB1
M07111_2.00
Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH
Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a
0.721
0.779
Q948S5_TOBAC
M11074_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYBA2_01
0.701
0.779
MYB3R4
M07125_2.00
Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN
Dap-seq
OMalley et al.(2016)
MYB3R4_col_a
0.667
0.736
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM01G40780.1
Myb
67
113
KGGWTPEEDETLRKAVEAYKGRNWKKIAECFPYRTEVQCLHRWQKVL
OGLUM01G40780.1
Myb
119
165
KGPWTQEEDDQIIDLVKKYGPTKWSVIAKALPGRIGKQCRERWHNHL
OGLUM01G40780.1
Myb
171
216
KDAWTTEEEQALINAHRIYGNKWAEIAKVLPGRTDNSIKNHWNSSL
OGLUM01G40780.2
Myb
67
105
KGGWTPEEDETLRKAVEAYKGRNWKKIEQRYNACIDGKR
OGLUM01G40780.2
Myb
112
153
SKEDDQIIDLVKKYGPTKWSVIAKALPGRIGKQCRERWHNHL
OGLUM01G40780.2
Myb
159
204
KDAWTTEEEQALINAHRIYGNKWAEIAKVLPGRTDNSIKNHWNSSL
Links
Other
Myb/SANT
family TFs
Other
Oryza glumaepatula
TFs
176 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OBART01G36770
Oryza barthii
OBART01G36770
N
0.909
OMERI01G33900
Oryza meridionalis
OMERI01G33900
N
0.909
ONIVA10G04750
Oryza nivara
ONIVA10G04750
N
0.909
ORGLA01G0306500
Oryza glaberrima
ORGLA01G0306500
I
0.909
ORUFI01G40130
Oryza rufipogon
ORUFI01G40130
N
0.909
MYB3R-2
Oryza sativa
OS01G0841500
I
0.909
OLONG_011208
Oryza longistaminata
OLONG_011208
I
0.842
LPERR01G31650
Leersia perrieri
LPERR01G31650
I
0.840
Sb03g039470
Sorghum bicolor
Sb03g039470
I
0.814
GRMZM2G081919
Zea mays
GRMZM2G081919
I
0.809
PRUPE_ppa003208mg
Prunus persica
PRUPE_ppa003208mg
I
0.806
Pm002704
Prunus mume
Pm002704
I
0.806
29846.m000184
Ricinus communis
29846.m000184
I
0.806
SapurV1A.0001s1810
Salix purpurea
SapurV1A.0001s1810
I
0.806
POPTR_0006s08570
Populus trichocarpa
POPTR_0006s08570
I
0.804
Cucsa.175460
Cucumis sativus
Cucsa.175460
I
0.803
Si000842m.g
Setaria italica
Si000842m.g
I
0.800
Pavir.Ea03349
Panicum virgatum
Pavir.Ea03349
I
0.800
Pavir.Eb03676
Panicum virgatum
Pavir.Eb03676
I
0.800
Ciclev10011452m.g
Citrus clementina
Ciclev10011452m.g
I
0.798
orange1.1g009402m.g
Citrus sinensis
orange1.1g009402m.g
I
0.798
OB01G45570
Oryza brachyantha
OB01G45570
I
0.790
Thhalv10020579m.g
Eutrema salsugineum
Thhalv10020579m.g
I
0.787
TCM_021936
Theobroma cacao
TCM_021936
I
0.786
Gorai.001G249400
Gossypium raimondii
Gorai.001G249400
I
0.786
chr1.CM0147.520.nd
Lotus japonicus
chr1.CM0147.520.nd
I
0.786
cassava12645.valid.m1
Manihot esculenta
cassava12645.valid.m1
I
0.784
GSMUA_Achr10G26610_001
Musa acuminata
GSMUA_Achr10G26610_001
I
0.783
MTR_7g061330
Medicago truncatula
MTR_7g061330
I
0.780
MTR_7g461410
Medicago truncatula
MTR_7g461410
I
0.780
Cla018173
Citrullus lanatus
Cla018173
I
0.780
Cagra.0487s0012
Capsella grandiflora
Cagra.0487s0012
I
0.780
Carubv10000643m.g
Capsella rubella
Carubv10000643m.g
I
0.780
evm.TU.supercontig_228.17
Carica papaya
evm.TU.supercontig_228.17
I
0.780
Lus10024394.g
Linum usitatissimum
Lus10024394.g
I
0.780
Lus10025351.g
Linum usitatissimum
Lus10025351.g
I
0.780
Traes_3AL_386795528
Triticum aestivum
Traes_3AL_386795528
I
0.779
TRAES3BF104600030CFD_g
Triticum aestivum
TRAES3BF104600030CFD_g
I
0.779
Traes_3DL_6BBC889A1
Triticum aestivum
Traes_3DL_6BBC889A1
I
0.779
BRADI2G54640
Brachypodium distachyon
BRADI2G54640
I
0.778
Gorai.006G172800
Gossypium raimondii
Gorai.006G172800
I
0.778
Thhalv10013211m.g
Eutrema salsugineum
Thhalv10013211m.g
I
0.777
Aquca_003_00045
Aquilegia coerulea
Aquca_003_00045
I
0.776
VIT_08s0007g00360
Vitis vinifera
VIT_08s0007g00360
I
0.772
gene18416-v1.0-hybrid
Fragaria vesca
gene18416-v1.0-hybrid
I
0.764
Bo1g144510
Brassica oleracea
Bo1g144510
I
0.763
Bra034067
Brassica rapa
Bra034067
I
0.763
GLYMA07G15820
Glycine max
GLYMA07G15820
I
0.760
Bostr.6251s0040
Boechera stricta
Bostr.6251s0040
I
0.760
Eucgr.K03133
Eucalyptus grandis
Eucgr.K03133
I
0.760
MDP0000219581
Malus domestica
MDP0000219581
I
0.756
GSMUA_Achr6G05030_001
Musa acuminata
GSMUA_Achr6G05030_001
I
0.755
Bra009597
Brassica rapa
Bra009597
I
0.750
MTR_1g026870
Medicago truncatula
MTR_1g026870
I
0.750
MYB3R-3
Arabidopsis thaliana
AT3G09370
I
0.749
fgenesh1_pg.C_scaffold_3000839
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_3000839
I
0.749
Bostr.22252s0130
Boechera stricta
Bostr.22252s0130
I
0.747
MYB3R5
Arabidopsis thaliana
AT5G02320
D
0.746
ATMYB3R5
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_6000124
I
0.746
GLYMA18G39740
Glycine max
GLYMA18G39740
I
0.744
PGSC0003DMG400008908
Solanum tuberosum
PGSC0003DMG400008908
I
0.744
Solyc09g010820.2
Solanum lycopersicum
Solyc09g010820.2
I
0.744
GSMUA_Achr7G10520_001
Musa acuminata
GSMUA_Achr7G10520_001
I
0.742
OPUNC05G16800
Oryza punctata
OPUNC05G16800
I
0.740
TRIUR3_29290
Triticum urartu
TRIUR3_29290
I
0.739
Bo9g184660
Brassica oleracea
Bo9g184660
I
0.734
Traes_1BL_C25B5DDB4
Triticum aestivum
Traes_1BL_C25B5DDB4
I
0.733
Ca_14925
Cicer arietinum
Ca_14925
I
0.733
Cagra.2515s0028
Capsella grandiflora
Cagra.2515s0028
I
0.732
Carubv10013377m.g
Capsella rubella
Carubv10013377m.g
I
0.732
Traes_1DL_B26A733D4
Triticum aestivum
Traes_1DL_B26A733D4
I
0.731
Si021484m.g
Setaria italica
Si021484m.g
I
0.729
gene08793-v1.0-hybrid
Fragaria vesca
gene08793-v1.0-hybrid
I
0.728
PK11664.1
Cannabis sativa
PK11664.1
I
0.728
29794.m003447
Ricinus communis
29794.m003447
I
0.727
BGIOSGA017917
Oryza indica
BGIOSGA017917
I
0.725
OBART05G19200
Oryza barthii
OBART05G19200
I
0.725
ONIVA05G20060
Oryza nivara
ONIVA05G20060
I
0.725
ORUFI05G20390
Oryza rufipogon
ORUFI05G20390
I
0.725
Ciclev10007316m.g
Citrus clementina
Ciclev10007316m.g
I
0.725
MDP0000295807
Malus domestica
MDP0000295807
I
0.724
PK12011.1
Cannabis sativa
PK12011.1
D
0.724
VIT_11s0016g03750
Vitis vinifera
VIT_11s0016g03750
I
0.723
GLYMA04G08550
Glycine max
GLYMA04G08550
I
0.722
GLYMA06G08660
Glycine max
GLYMA06G08660
I
0.722
PC-MYB1
Arabidopsis thaliana
AT4G32730
D
0.721
PC-MYB1
Arabidopsis lyrata
fgenesh2_kg.7__866__AT4G32730.2
I
0.721
Bostr.7867s1124
Boechera stricta
Bostr.7867s1124
I
0.721
Bo3g171130
Brassica oleracea
Bo3g171130
I
0.720
Bra034531
Brassica rapa
Bra034531
I
0.720
mgf019610m
Mimulus guttatus
mgf019610m
I
0.720
GLYMA03G19470
Glycine max
GLYMA03G19470
I
0.718
Solyc08g068320.2
Solanum lycopersicum
Solyc08g068320.2
I
0.718
MTR_3g110028
Medicago truncatula
MTR_3g110028
I
0.717
Cla023357
Citrullus lanatus
Cla023357
I
0.717
Cucsa.311420
Cucumis sativus
Cucsa.311420
I
0.717
Bo7g115810
Brassica oleracea
Bo7g115810
I
0.716
MDP0000179225
Malus domestica
MDP0000179225
I
0.716
POPTR_0006s25840
Populus trichocarpa
POPTR_0006s25840
I
0.714
POPTR_0018s00710
Populus trichocarpa
POPTR_0018s00710
I
0.714
TCM_047091
Theobroma cacao
TCM_047091
I
0.714
Gorai.009G051000
Gossypium raimondii
Gorai.009G051000
I
0.714
Bra029762
Brassica rapa
Bra029762
I
0.713
Cla022565
Citrullus lanatus
Cla022565
I
0.712
Cucsa.161430
Cucumis sativus
Cucsa.161430
I
0.712
Eucgr.C02893
Eucalyptus grandis
Eucgr.C02893
I
0.712
SapurV1A.0283s0180
Salix purpurea
SapurV1A.0283s0180
I
0.712
PRUPE_ppa000676mg
Prunus persica
PRUPE_ppa000676mg
I
0.710
LjT22I05.60.nd
Lotus japonicus
LjT22I05.60.nd
I
0.709
Bo1g010040
Brassica oleracea
Bo1g010040
I
0.708
Bo5g139340
Brassica oleracea
Bo5g139340
I
0.708
Traes_3AS_09025DA2E
Triticum aestivum
Traes_3AS_09025DA2E
I
0.708
TRAES3BF049800070CFD_g
Triticum aestivum
TRAES3BF049800070CFD_g
I
0.708
ORGLA05G0166300
Oryza glaberrima
ORGLA05G0166300
I
0.707
OS05G0459000
Oryza sativa
OS05G0459000
I
0.707
Aquca_013_00366
Aquilegia coerulea
Aquca_013_00366
I
0.707
GSMUA_Achr2G19890_001
Musa acuminata
GSMUA_Achr2G19890_001
I
0.706
Traes_1BS_403DBC53C
Triticum aestivum
Traes_1BS_403DBC53C
I
0.705
Bra011376
Brassica rapa
Bra011376
I
0.702
GLYMA17G26240
Glycine max
GLYMA17G26240
I
0.702
e_gw1.120.1.1
Physcomitrella patens
e_gw1.120.1.1
I
0.702
e_gw1.36.4.1
Physcomitrella patens
e_gw1.36.4.1
I
0.702
Q948S5_TOBAC
Nicotiana tabacum
Q948S5_TOBAC
D
0.701
AMTR_s00012p00208260
Amborella trichopoda
AMTR_s00012p00208260
I
0.700
Thhalv10024320m.g
Eutrema salsugineum
Thhalv10024320m.g
I
0.700
OPUNC01G07980
Oryza punctata
OPUNC01G07980
I
0.699
OPUNC01G08000
Oryza punctata
OPUNC01G08000
I
0.699
evm.TU.supercontig_78.76
Carica papaya
evm.TU.supercontig_78.76
I
0.698
Gorai.010G110000
Gossypium raimondii
Gorai.010G110000
I
0.697
OB12G16480
Oryza brachyantha
OB12G16480
I
0.695
OBART01G08110
Oryza barthii
OBART01G08110
I
0.695
OGLUM01G09290
Oryza glumaepatula
OGLUM01G09290
I
0.695
OLONG_011886
Oryza longistaminata
OLONG_011886
I
0.695
ONIVA01G10670
Oryza nivara
ONIVA01G10670
I
0.695
ORGLA12G0066300
Oryza glaberrima
ORGLA12G0066300
I
0.695
OS12G0238000
Oryza sativa
OS12G0238000
I
0.695
GLYMA14G21523
Glycine max
GLYMA14G21523
I
0.692
Traes_1AS_61D017632
Triticum aestivum
Traes_1AS_61D017632
I
0.692
TRIUR3_24658
Triticum urartu
TRIUR3_24658
I
0.691
Pm005124
Prunus mume
Pm005124
I
0.690
Pavir.Ea00087
Panicum virgatum
Pavir.Ea00087
I
0.689
Pavir.Eb00149
Panicum virgatum
Pavir.Eb00149
I
0.689
F775_05724
Aegilops tauschii
F775_05724
I
0.688
OB01G18340
Oryza brachyantha
OB01G18340
I
0.687
OB05G26770
Oryza brachyantha
OB05G26770
N
0.687
OMERI01G08160
Oryza meridionalis
OMERI01G08160
I
0.687
Bra037045
Brassica rapa
Bra037045
I
0.686
VIT_04s0008g03780
Vitis vinifera
VIT_04s0008g03780
I
0.685
AMTR_s00109p00061950
Amborella trichopoda
AMTR_s00109p00061950
I
0.684
SapurV1A.0446s0220
Salix purpurea
SapurV1A.0446s0220
I
0.684
PDK_20s1371143g001
Phoenix dactylifera
PDK_20s1371143g001
I
0.680
Ca_01884
Cicer arietinum
Ca_01884
I
0.679
Gorai.001G028200
Gossypium raimondii
Gorai.001G028200
I
0.679
OPUNC01G35700
Oryza punctata
OPUNC01G35700
N
0.677
Lus10022136.g
Linum usitatissimum
Lus10022136.g
I
0.676
GSMUA_Achr10G14840_001
Musa acuminata
GSMUA_Achr10G14840_001
I
0.674
ORGLA01G0073200
Oryza glaberrima
ORGLA01G0073200
I
0.674
mgf008601m
Mimulus guttatus
mgf008601m
I
0.673
F775_12121
Aegilops tauschii
F775_12121
N
0.672
TRIUR3_33469
Triticum urartu
TRIUR3_33469
N
0.672
Cagra.4093s0003
Capsella grandiflora
Cagra.4093s0003
I
0.672
Carubv10004063m.g
Capsella rubella
Carubv10004063m.g
I
0.672
PDK_20s1314361g001
Phoenix dactylifera
PDK_20s1314361g001
N
0.670
Pm018007
Prunus mume
Pm018007
I
0.669
Ca_21127
Cicer arietinum
Ca_21127
I
0.668
MYB3R4
Arabidopsis thaliana
AT5G11510
D
0.667
Bo3g062020
Brassica oleracea
Bo3g062020
N
0.667
MYB3R-4
Arabidopsis lyrata
fgenesh2_kg.6__1121__AT5G11510.1
I
0.667
Bostr.20055s0087
Boechera stricta
Bostr.20055s0087
I
0.667
Cagra.7526s0003
Capsella grandiflora
Cagra.7526s0003
I
0.667
Carubv10000155m.g
Capsella rubella
Carubv10000155m.g
I
0.667
Pavir.J07395
Panicum virgatum
Pavir.J07395
I
0.666
Bo9g171130
Brassica oleracea
Bo9g171130
I
0.665
Bra008956
Brassica rapa
Bra008956
I
0.665
MLOC_10556
Hordeum vulgare
MLOC_10556
I
0.665