ORGLA05G0166300 (Oryza glaberrima)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 ORGLA05G0166300 T276737_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB3R5
M07116_2.00 		Arabidopsis thaliana
NWWWWNTDRCCGTTR
YAACGGYHANWWWWN		 Dap-seq
OMalley et al.(2016)
MYB3R5_col_a 		0.688 0.818
PK12011.1
M01279_2.00 		Cannabis sativa
HAACGGHHNN
NNDDCCGTTD		 PBM
Lambert et al.(2019)
pTH11423 		0.664 0.773
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA05G0166300.1 Myb 58 96
ORGLA05G0166300.1 Myb 102 148
ORGLA05G0166300.1 Myb 154 199

Links

Other Myb/SANT family TFs
Other Oryza glaberrima TFs

84 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OS05G0459000 Oryza sativa OS05G0459000 I 0.909
OPUNC05G16800 Oryza punctata OPUNC05G16800 I 0.889
BGIOSGA017917 Oryza indica BGIOSGA017917 I 0.868
OBART05G19200 Oryza barthii OBART05G19200 I 0.868
ONIVA05G20060 Oryza nivara ONIVA05G20060 I 0.868
ORUFI05G20390 Oryza rufipogon ORUFI05G20390 I 0.868
OB05G26770 Oryza brachyantha OB05G26770 N 0.790
Si021484m.g Setaria italica Si021484m.g I 0.769
OGLUM05G20280 Oryza glumaepatula OGLUM05G20280 N 0.765
LPERR05G15070 Leersia perrieri LPERR05G15070 N 0.748
TRIUR3_29290 Triticum urartu TRIUR3_29290 I 0.737
Traes_1BL_C25B5DDB4 Triticum aestivum Traes_1BL_C25B5DDB4 I 0.731
Traes_1DL_B26A733D4 Triticum aestivum Traes_1DL_B26A733D4 I 0.731
cassava12645.valid.m1 Manihot esculenta cassava12645.valid.m1 I 0.722
Si000842m.g Setaria italica Si000842m.g I 0.719
Pavir.Ea03349 Panicum virgatum Pavir.Ea03349 I 0.719
Pavir.Eb03676 Panicum virgatum Pavir.Eb03676 I 0.719
OPUNC01G07980 Oryza punctata OPUNC01G07980 I 0.715
OPUNC01G08000 Oryza punctata OPUNC01G08000 I 0.715
Sb03g039470 Sorghum bicolor Sb03g039470 I 0.713
gene18416-v1.0-hybrid Fragaria vesca gene18416-v1.0-hybrid I 0.713
OGLUM01G40780 Oryza glumaepatula OGLUM01G40780 I 0.707
ORGLA01G0306500 Oryza glaberrima ORGLA01G0306500 I 0.707
MYB3R-2 Oryza sativa OS01G0841500 I 0.707
GRMZM2G081919 Zea mays GRMZM2G081919 I 0.702
Cucsa.175460 Cucumis sativus Cucsa.175460 I 0.702
MDP0000295807 Malus domestica MDP0000295807 I 0.700
Cla018173 Citrullus lanatus Cla018173 I 0.696
Traes_3AS_09025DA2E Triticum aestivum Traes_3AS_09025DA2E I 0.694
TRAES3BF049800070CFD_g Triticum aestivum TRAES3BF049800070CFD_g I 0.694
Lus10024394.g Linum usitatissimum Lus10024394.g I 0.693
Lus10025351.g Linum usitatissimum Lus10025351.g I 0.693
MDP0000179225 Malus domestica MDP0000179225 I 0.693
Bostr.6251s0040 Boechera stricta Bostr.6251s0040 I 0.691
MYB3R5 Arabidopsis thaliana AT5G02320 D 0.688
Ciclev10011452m.g Citrus clementina Ciclev10011452m.g I 0.684
orange1.1g009402m.g Citrus sinensis orange1.1g009402m.g I 0.684
OB12G16480 Oryza brachyantha OB12G16480 I 0.681
ORGLA12G0066300 Oryza glaberrima ORGLA12G0066300 I 0.681
OS12G0238000 Oryza sativa OS12G0238000 I 0.681
GSMUA_Achr10G26610_001 Musa acuminata GSMUA_Achr10G26610_001 I 0.680
OBART01G08110 Oryza barthii OBART01G08110 I 0.680
OGLUM01G09290 Oryza glumaepatula OGLUM01G09290 I 0.680
OLONG_011886 Oryza longistaminata OLONG_011886 I 0.680
ONIVA01G10670 Oryza nivara ONIVA01G10670 I 0.680
SapurV1A.0001s1810 Salix purpurea SapurV1A.0001s1810 I 0.680
Aquca_003_00045 Aquilegia coerulea Aquca_003_00045 I 0.679
POPTR_0006s08570 Populus trichocarpa POPTR_0006s08570 I 0.678
VIT_08s0007g00360 Vitis vinifera VIT_08s0007g00360 I 0.678
Thhalv10020579m.g Eutrema salsugineum Thhalv10020579m.g I 0.678
Bo1g144510 Brassica oleracea Bo1g144510 I 0.677
Bra034067 Brassica rapa Bra034067 I 0.677
ATMYB3R5 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6000124 I 0.677
Traes_1BS_403DBC53C Triticum aestivum Traes_1BS_403DBC53C I 0.677
TRIUR3_24658 Triticum urartu TRIUR3_24658 I 0.677
LPERR01G31650 Leersia perrieri LPERR01G31650 I 0.675
Pavir.Ea00087 Panicum virgatum Pavir.Ea00087 I 0.675
Pavir.Eb00149 Panicum virgatum Pavir.Eb00149 I 0.675
F775_05724 Aegilops tauschii F775_05724 I 0.674
Thhalv10013211m.g Eutrema salsugineum Thhalv10013211m.g I 0.674
OB01G18340 Oryza brachyantha OB01G18340 I 0.673
OMERI01G08160 Oryza meridionalis OMERI01G08160 I 0.673
PRUPE_ppa003208mg Prunus persica PRUPE_ppa003208mg I 0.673
Traes_3AL_386795528 Triticum aestivum Traes_3AL_386795528 I 0.673
TRAES3BF104600030CFD_g Triticum aestivum TRAES3BF104600030CFD_g I 0.673
Traes_3DL_6BBC889A1 Triticum aestivum Traes_3DL_6BBC889A1 I 0.673
Pm002704 Prunus mume Pm002704 I 0.673
29846.m000184 Ricinus communis 29846.m000184 I 0.673
Gorai.001G249400 Gossypium raimondii Gorai.001G249400 I 0.673
PRUPE_ppa000676mg Prunus persica PRUPE_ppa000676mg I 0.671
Cagra.0487s0012 Capsella grandiflora Cagra.0487s0012 I 0.671
Carubv10000643m.g Capsella rubella Carubv10000643m.g I 0.671
MTR_1g026870 Medicago truncatula MTR_1g026870 I 0.670
OB01G45570 Oryza brachyantha OB01G45570 I 0.666
Eucgr.K03133 Eucalyptus grandis Eucgr.K03133 I 0.666
evm.TU.supercontig_228.17 Carica papaya evm.TU.supercontig_228.17 I 0.666
Lus10022136.g Linum usitatissimum Lus10022136.g I 0.666
fgenesh1_pg.C_scaffold_3000839 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000839 I 0.665
Gorai.006G172800 Gossypium raimondii Gorai.006G172800 I 0.664
PK12011.1 Cannabis sativa PK12011.1 D 0.664
BRADI2G54640 Brachypodium distachyon BRADI2G54640 I 0.663
MDP0000219581 Malus domestica MDP0000219581 I 0.663
GSMUA_Achr7G10520_001 Musa acuminata GSMUA_Achr7G10520_001 I 0.662
Traes_1AS_61D017632 Triticum aestivum Traes_1AS_61D017632 I 0.661