Si021484m.g (Setaria italica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Si021484m.g T279818_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB3R5
M07116_2.00 		Arabidopsis thaliana
NWWWWNTDRCCGTTR
YAACGGYHANWWWWN		 Dap-seq
OMalley et al.(2016)
MYB3R5_col_a 		0.670 0.771
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.666 0.714
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.666 0.714
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si021484m Myb 68 114
Si021484m Myb 120 166
Si021484m Myb 172 217

Links

Other Myb/SANT family TFs
Other Setaria italica TFs

121 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA017917 Oryza indica BGIOSGA017917 I 0.797
OBART05G19200 Oryza barthii OBART05G19200 I 0.797
ONIVA05G20060 Oryza nivara ONIVA05G20060 I 0.797
ORUFI05G20390 Oryza rufipogon ORUFI05G20390 I 0.797
OPUNC05G16800 Oryza punctata OPUNC05G16800 I 0.777
ORGLA05G0166300 Oryza glaberrima ORGLA05G0166300 I 0.769
OS05G0459000 Oryza sativa OS05G0459000 I 0.769
OB05G26770 Oryza brachyantha OB05G26770 N 0.752
GRMZM2G081919 Zea mays GRMZM2G081919 I 0.737
Cucsa.175460 Cucumis sativus Cucsa.175460 I 0.734
OGLUM01G40780 Oryza glumaepatula OGLUM01G40780 I 0.729
ORGLA01G0306500 Oryza glaberrima ORGLA01G0306500 I 0.729
MYB3R-2 Oryza sativa OS01G0841500 I 0.729
Sb03g039470 Sorghum bicolor Sb03g039470 I 0.726
TRIUR3_29290 Triticum urartu TRIUR3_29290 I 0.722
29846.m000184 Ricinus communis 29846.m000184 I 0.721
Traes_1BL_C25B5DDB4 Triticum aestivum Traes_1BL_C25B5DDB4 I 0.716
Traes_1DL_B26A733D4 Triticum aestivum Traes_1DL_B26A733D4 I 0.713
Si000842m.g Setaria italica Si000842m.g I 0.712
Traes_3AS_09025DA2E Triticum aestivum Traes_3AS_09025DA2E I 0.712
TRAES3BF049800070CFD_g Triticum aestivum TRAES3BF049800070CFD_g I 0.712
Pavir.Ea03349 Panicum virgatum Pavir.Ea03349 I 0.712
Pavir.Eb03676 Panicum virgatum Pavir.Eb03676 I 0.712
Cla018173 Citrullus lanatus Cla018173 I 0.708
GSMUA_Achr10G26610_001 Musa acuminata GSMUA_Achr10G26610_001 I 0.706
OPUNC01G07980 Oryza punctata OPUNC01G07980 I 0.704
OPUNC01G08000 Oryza punctata OPUNC01G08000 I 0.704
Aquca_003_00045 Aquilegia coerulea Aquca_003_00045 I 0.704
F775_05724 Aegilops tauschii F775_05724 I 0.703
Traes_1AS_61D017632 Triticum aestivum Traes_1AS_61D017632 I 0.701
TRAES3BF104600030CFD_g Triticum aestivum TRAES3BF104600030CFD_g I 0.701
OB12G16480 Oryza brachyantha OB12G16480 I 0.698
OBART01G08110 Oryza barthii OBART01G08110 I 0.698
OGLUM01G09290 Oryza glumaepatula OGLUM01G09290 I 0.698
OLONG_011886 Oryza longistaminata OLONG_011886 I 0.698
ONIVA01G10670 Oryza nivara ONIVA01G10670 I 0.698
ORGLA12G0066300 Oryza glaberrima ORGLA12G0066300 I 0.698
OS12G0238000 Oryza sativa OS12G0238000 I 0.698
PRUPE_ppa003208mg Prunus persica PRUPE_ppa003208mg I 0.698
Pm002704 Prunus mume Pm002704 I 0.698
Gorai.001G249400 Gossypium raimondii Gorai.001G249400 I 0.698
Lus10024394.g Linum usitatissimum Lus10024394.g I 0.698
Lus10025351.g Linum usitatissimum Lus10025351.g I 0.698
LPERR01G31650 Leersia perrieri LPERR01G31650 I 0.697
chr1.CM0147.520.nd Lotus japonicus chr1.CM0147.520.nd I 0.695
TRIUR3_24658 Triticum urartu TRIUR3_24658 I 0.694
Pavir.Ea00087 Panicum virgatum Pavir.Ea00087 I 0.692
Pavir.Eb00149 Panicum virgatum Pavir.Eb00149 I 0.692
OMERI01G08160 Oryza meridionalis OMERI01G08160 I 0.691
evm.TU.supercontig_228.17 Carica papaya evm.TU.supercontig_228.17 I 0.691
Traes_3AL_386795528 Triticum aestivum Traes_3AL_386795528 I 0.690
Traes_3DL_6BBC889A1 Triticum aestivum Traes_3DL_6BBC889A1 I 0.690
BRADI2G54640 Brachypodium distachyon BRADI2G54640 I 0.689
ORGLA01G0073200 Oryza glaberrima ORGLA01G0073200 I 0.689
Ciclev10011452m.g Citrus clementina Ciclev10011452m.g I 0.689
orange1.1g009402m.g Citrus sinensis orange1.1g009402m.g I 0.689
OB01G18340 Oryza brachyantha OB01G18340 I 0.687
Traes_1BS_403DBC53C Triticum aestivum Traes_1BS_403DBC53C I 0.685
SapurV1A.0001s1810 Salix purpurea SapurV1A.0001s1810 I 0.685
GSMUA_Achr2G19890_001 Musa acuminata GSMUA_Achr2G19890_001 I 0.684
GSMUA_Achr7G10520_001 Musa acuminata GSMUA_Achr7G10520_001 I 0.684
LPERR05G15070 Leersia perrieri LPERR05G15070 N 0.684
Thhalv10020579m.g Eutrema salsugineum Thhalv10020579m.g I 0.684
Bo1g144510 Brassica oleracea Bo1g144510 I 0.683
Bra034067 Brassica rapa Bra034067 I 0.683
MTR_7g061330 Medicago truncatula MTR_7g061330 I 0.683
MTR_7g461410 Medicago truncatula MTR_7g461410 I 0.683
POPTR_0006s08570 Populus trichocarpa POPTR_0006s08570 I 0.683
VIT_08s0007g00360 Vitis vinifera VIT_08s0007g00360 I 0.683
gene18416-v1.0-hybrid Fragaria vesca gene18416-v1.0-hybrid I 0.682
Lus10022136.g Linum usitatissimum Lus10022136.g I 0.682
MDP0000219581 Malus domestica MDP0000219581 I 0.679
Thhalv10013211m.g Eutrema salsugineum Thhalv10013211m.g I 0.679
TCM_021936 Theobroma cacao TCM_021936 I 0.678
Bostr.6251s0040 Boechera stricta Bostr.6251s0040 I 0.677
Cagra.0487s0012 Capsella grandiflora Cagra.0487s0012 I 0.677
Carubv10000643m.g Capsella rubella Carubv10000643m.g I 0.677
Pavir.J07395 Panicum virgatum Pavir.J07395 I 0.677
MLOC_10556 Hordeum vulgare MLOC_10556 I 0.676
PRUPE_ppa000676mg Prunus persica PRUPE_ppa000676mg I 0.675
VIT_11s0016g03750 Vitis vinifera VIT_11s0016g03750 I 0.673
gene08793-v1.0-hybrid Fragaria vesca gene08793-v1.0-hybrid I 0.673
Bo7g115810 Brassica oleracea Bo7g115810 I 0.672
GLYMA04G08550 Glycine max GLYMA04G08550 I 0.672
GLYMA06G08660 Glycine max GLYMA06G08660 I 0.672
Aquca_001_00435 Aquilegia coerulea Aquca_001_00435 I 0.672
MDP0000295807 Malus domestica MDP0000295807 I 0.672
cassava12645.valid.m1 Manihot esculenta cassava12645.valid.m1 I 0.671
Eucgr.K03133 Eucalyptus grandis Eucgr.K03133 I 0.671
MYB3R5 Arabidopsis thaliana AT5G02320 D 0.670
POPTR_0006s25840 Populus trichocarpa POPTR_0006s25840 I 0.670
POPTR_0018s00710 Populus trichocarpa POPTR_0018s00710 I 0.670
Ciclev10007316m.g Citrus clementina Ciclev10007316m.g I 0.670
evm.TU.supercontig_78.76 Carica papaya evm.TU.supercontig_78.76 I 0.670
Bostr.22252s0130 Boechera stricta Bostr.22252s0130 I 0.669
Gorai.006G172800 Gossypium raimondii Gorai.006G172800 I 0.669
fgenesh1_pg.C_scaffold_3000839 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000839 I 0.668
Cla022565 Citrullus lanatus Cla022565 I 0.668
Cucsa.161430 Cucumis sativus Cucsa.161430 I 0.668
Eucgr.C02893 Eucalyptus grandis Eucgr.C02893 I 0.668
SapurV1A.0283s0180 Salix purpurea SapurV1A.0283s0180 I 0.668
LjT22I05.60.nd Lotus japonicus LjT22I05.60.nd I 0.668
Cla023357 Citrullus lanatus Cla023357 I 0.667
29794.m003447 Ricinus communis 29794.m003447 I 0.667
Cucsa.311420 Cucumis sativus Cucsa.311420 I 0.667
Thhalv10024320m.g Eutrema salsugineum Thhalv10024320m.g I 0.667
PC-MYB1 Arabidopsis thaliana AT4G32730 D 0.666
Bo9g184660 Brassica oleracea Bo9g184660 I 0.666
Bra009597 Brassica rapa Bra009597 I 0.666
BRADI2G31887 Brachypodium distachyon BRADI2G31887 I 0.666
PC-MYB1 Arabidopsis lyrata fgenesh2_kg.7__866__AT4G32730.2 I 0.666
OGLUM05G20280 Oryza glumaepatula OGLUM05G20280 N 0.666
Pm005124 Prunus mume Pm005124 I 0.666
Bostr.7867s1124 Boechera stricta Bostr.7867s1124 I 0.666
MDP0000179225 Malus domestica MDP0000179225 I 0.665
MYB3R-3 Arabidopsis thaliana AT3G09370 I 0.663
GLYMA07G15820 Glycine max GLYMA07G15820 I 0.663
GLYMA18G39740 Glycine max GLYMA18G39740 I 0.663
MTR_1g026870 Medicago truncatula MTR_1g026870 I 0.662
OLONG_011208 Oryza longistaminata OLONG_011208 I 0.662
GSMUA_Achr6G05030_001 Musa acuminata GSMUA_Achr6G05030_001 I 0.661