GLYMA18G39740 (Glycine max)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GLYMA18G39740 T271744_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB3R5
M07116_2.00 		Arabidopsis thaliana
NWWWWNTDRCCGTTR
YAACGGYHANWWWWN		 Dap-seq
OMalley et al.(2016)
MYB3R5_col_a 		0.755 0.864
Q948S5_TOBAC
M11074_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA2_01 		0.677 0.764
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA18G39740.1 Myb 63 109
GLYMA18G39740.1 Myb 115 161
GLYMA18G39740.1 Myb 167 212

Links

Other Myb/SANT family TFs
Other Glycine max TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA07G15820 Glycine max GLYMA07G15820 I 0.893
chr1.CM0147.520.nd Lotus japonicus chr1.CM0147.520.nd I 0.849
PRUPE_ppa003208mg Prunus persica PRUPE_ppa003208mg I 0.846
Pm002704 Prunus mume Pm002704 I 0.846
Gorai.006G172800 Gossypium raimondii Gorai.006G172800 I 0.841
Ciclev10011452m.g Citrus clementina Ciclev10011452m.g I 0.833
orange1.1g009402m.g Citrus sinensis orange1.1g009402m.g I 0.833
POPTR_0006s08570 Populus trichocarpa POPTR_0006s08570 I 0.829
29846.m000184 Ricinus communis 29846.m000184 I 0.827
SapurV1A.0001s1810 Salix purpurea SapurV1A.0001s1810 I 0.827
TCM_021936 Theobroma cacao TCM_021936 I 0.826
Gorai.001G249400 Gossypium raimondii Gorai.001G249400 I 0.815
MTR_7g061330 Medicago truncatula MTR_7g061330 I 0.814
MTR_7g461410 Medicago truncatula MTR_7g461410 I 0.814
Cagra.2515s0028 Capsella grandiflora Cagra.2515s0028 I 0.809
Carubv10013377m.g Capsella rubella Carubv10013377m.g I 0.809
VIT_08s0007g00360 Vitis vinifera VIT_08s0007g00360 I 0.807
Eucgr.K03133 Eucalyptus grandis Eucgr.K03133 I 0.807
MDP0000219581 Malus domestica MDP0000219581 I 0.807
Bostr.22252s0130 Boechera stricta Bostr.22252s0130 I 0.803
fgenesh1_pg.C_scaffold_3000839 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000839 I 0.793
Cagra.0487s0012 Capsella grandiflora Cagra.0487s0012 I 0.793
Carubv10000643m.g Capsella rubella Carubv10000643m.g I 0.793
evm.TU.supercontig_228.17 Carica papaya evm.TU.supercontig_228.17 I 0.793
Thhalv10020579m.g Eutrema salsugineum Thhalv10020579m.g I 0.793
PK11664.1 Cannabis sativa PK11664.1 I 0.791
Aquca_003_00045 Aquilegia coerulea Aquca_003_00045 I 0.790
Lus10024394.g Linum usitatissimum Lus10024394.g I 0.789
Lus10025351.g Linum usitatissimum Lus10025351.g I 0.789
cassava12645.valid.m1 Manihot esculenta cassava12645.valid.m1 I 0.788
Thhalv10013211m.g Eutrema salsugineum Thhalv10013211m.g I 0.788
Traes_3AL_386795528 Triticum aestivum Traes_3AL_386795528 I 0.785
TRAES3BF104600030CFD_g Triticum aestivum TRAES3BF104600030CFD_g I 0.785
Traes_3DL_6BBC889A1 Triticum aestivum Traes_3DL_6BBC889A1 I 0.785
Bo1g144510 Brassica oleracea Bo1g144510 I 0.784
Bra034067 Brassica rapa Bra034067 I 0.784
MYB3R-3 Arabidopsis thaliana AT3G09370 I 0.776
mgf019610m Mimulus guttatus mgf019610m I 0.776
GSMUA_Achr10G26610_001 Musa acuminata GSMUA_Achr10G26610_001 I 0.773
Bostr.6251s0040 Boechera stricta Bostr.6251s0040 I 0.773
Cucsa.175460 Cucumis sativus Cucsa.175460 I 0.772
PGSC0003DMG400008908 Solanum tuberosum PGSC0003DMG400008908 I 0.768
Solyc09g010820.2 Solanum lycopersicum Solyc09g010820.2 I 0.768
Cla018173 Citrullus lanatus Cla018173 I 0.766
LPERR01G31650 Leersia perrieri LPERR01G31650 I 0.762
BRADI2G54640 Brachypodium distachyon BRADI2G54640 I 0.758
gene18416-v1.0-hybrid Fragaria vesca gene18416-v1.0-hybrid I 0.758
MYB3R5 Arabidopsis thaliana AT5G02320 D 0.755
ATMYB3R5 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6000124 I 0.755
Pavir.Ea03349 Panicum virgatum Pavir.Ea03349 I 0.748
Bo5g139340 Brassica oleracea Bo5g139340 I 0.744
OGLUM01G40780 Oryza glumaepatula OGLUM01G40780 I 0.744
ORGLA01G0306500 Oryza glaberrima ORGLA01G0306500 I 0.744
MYB3R-2 Oryza sativa OS01G0841500 I 0.744
Bra029762 Brassica rapa Bra029762 I 0.743
GRMZM2G081919 Zea mays GRMZM2G081919 I 0.737
Si000842m.g Setaria italica Si000842m.g I 0.737
Pavir.Eb03676 Panicum virgatum Pavir.Eb03676 I 0.737
Sb03g039470 Sorghum bicolor Sb03g039470 I 0.731
GLYMA03G19470 Glycine max GLYMA03G19470 I 0.730
Bra009597 Brassica rapa Bra009597 I 0.721
GSMUA_Achr7G10520_001 Musa acuminata GSMUA_Achr7G10520_001 I 0.713
Bo9g184660 Brassica oleracea Bo9g184660 I 0.712
GSMUA_Achr6G05030_001 Musa acuminata GSMUA_Achr6G05030_001 I 0.707
Traes_1BL_C25B5DDB4 Triticum aestivum Traes_1BL_C25B5DDB4 I 0.707
Ca_21127 Cicer arietinum Ca_21127 I 0.706
TRIUR3_29290 Triticum urartu TRIUR3_29290 I 0.702
MTR_1g026870 Medicago truncatula MTR_1g026870 I 0.695
Ca_14925 Cicer arietinum Ca_14925 I 0.694
Traes_1DL_B26A733D4 Triticum aestivum Traes_1DL_B26A733D4 I 0.693
AMTR_s00012p00208260 Amborella trichopoda AMTR_s00012p00208260 I 0.692
Bo3g062020 Brassica oleracea Bo3g062020 N 0.685
VIT_11s0016g03750 Vitis vinifera VIT_11s0016g03750 I 0.684
Cla022565 Citrullus lanatus Cla022565 I 0.683
Cucsa.161430 Cucumis sativus Cucsa.161430 I 0.683
Eucgr.C02893 Eucalyptus grandis Eucgr.C02893 I 0.683
SapurV1A.0283s0180 Salix purpurea SapurV1A.0283s0180 I 0.683
OB01G45570 Oryza brachyantha OB01G45570 I 0.682
OPUNC05G16800 Oryza punctata OPUNC05G16800 I 0.682
POPTR_0006s25840 Populus trichocarpa POPTR_0006s25840 I 0.681
TCM_047091 Theobroma cacao TCM_047091 I 0.681
evm.TU.supercontig_78.76 Carica papaya evm.TU.supercontig_78.76 I 0.681
Gorai.009G051000 Gossypium raimondii Gorai.009G051000 I 0.681
OLONG_011208 Oryza longistaminata OLONG_011208 I 0.677
Solyc08g068320.2 Solanum lycopersicum Solyc08g068320.2 I 0.677
Q948S5_TOBAC Nicotiana tabacum Q948S5_TOBAC D 0.677
gene08793-v1.0-hybrid Fragaria vesca gene08793-v1.0-hybrid I 0.677
POPTR_0018s00710 Populus trichocarpa POPTR_0018s00710 I 0.675
Ciclev10007316m.g Citrus clementina Ciclev10007316m.g I 0.670
BGIOSGA017917 Oryza indica BGIOSGA017917 I 0.668
Bo1g010040 Brassica oleracea Bo1g010040 I 0.668
OBART05G19200 Oryza barthii OBART05G19200 I 0.668
ONIVA05G20060 Oryza nivara ONIVA05G20060 I 0.668
ORUFI05G20390 Oryza rufipogon ORUFI05G20390 I 0.668
29794.m003447 Ricinus communis 29794.m003447 I 0.668
Bo7g115810 Brassica oleracea Bo7g115810 I 0.667
Cla023357 Citrullus lanatus Cla023357 I 0.667
Cucsa.311420 Cucumis sativus Cucsa.311420 I 0.667
MTR_3g110028 Medicago truncatula MTR_3g110028 I 0.666
Gorai.010G110000 Gossypium raimondii Gorai.010G110000 I 0.666
Traes_1BS_403DBC53C Triticum aestivum Traes_1BS_403DBC53C I 0.665
PDK_20s1314361g001 Phoenix dactylifera PDK_20s1314361g001 N 0.664
Bra011376 Brassica rapa Bra011376 I 0.663
Si021484m.g Setaria italica Si021484m.g I 0.663
GSMUA_Achr10G14840_001 Musa acuminata GSMUA_Achr10G14840_001 I 0.661
GSMUA_Achr2G19890_001 Musa acuminata GSMUA_Achr2G19890_001 I 0.661
MDP0000179225 Malus domestica MDP0000179225 I 0.661