CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OB01G45570
(
Oryza brachyantha
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
OB01G45570
T275205_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB3R5
M07116_2.00
Arabidopsis thaliana
NWWWWNTDRCCGTTR
YAACGGYHANWWWWN
Dap-seq
OMalley et al.(2016)
MYB3R5_col_a
0.705
0.850
PK12011.1
M01279_2.00
Cannabis sativa
HAACGGHHNN
NNDDCCGTTD
PBM
Lambert et al.(2019)
pTH11423
0.694
0.779
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OB01G45570.1
Myb
65
111
KGGWTPEEDETLRKAVEVYNARNWKKIAECFPYRTEVQCLHRWQKVL
OB01G45570.1
Myb
117
163
KGPWTPEEDDQIINLVKEYGPTKWSVIAKALPGRIGKQCRERWHNHL
OB01G45570.1
Myb
169
214
KDAWTAEEEVALINAHKMYGNKWAEIAKVLPGRTDNSIKNHWNSSL
Links
Other
Myb/SANT
family TFs
Other
Oryza brachyantha
TFs
98 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA01G0306500
Oryza glaberrima
ORGLA01G0306500
I
0.790
MYB3R-2
Oryza sativa
OS01G0841500
I
0.790
OGLUM01G40780
Oryza glumaepatula
OGLUM01G40780
I
0.790
LPERR01G31650
Leersia perrieri
LPERR01G31650
I
0.770
TRIUR3_29290
Triticum urartu
TRIUR3_29290
I
0.752
BRADI2G54640
Brachypodium distachyon
BRADI2G54640
I
0.748
Traes_1BL_C25B5DDB4
Triticum aestivum
Traes_1BL_C25B5DDB4
I
0.746
Traes_1DL_B26A733D4
Triticum aestivum
Traes_1DL_B26A733D4
I
0.743
Lus10024394.g
Linum usitatissimum
Lus10024394.g
I
0.742
Lus10025351.g
Linum usitatissimum
Lus10025351.g
I
0.742
Pavir.Eb03676
Panicum virgatum
Pavir.Eb03676
I
0.739
Si000842m.g
Setaria italica
Si000842m.g
I
0.739
Pavir.Ea03349
Panicum virgatum
Pavir.Ea03349
I
0.739
Eucgr.K03133
Eucalyptus grandis
Eucgr.K03133
I
0.739
OLONG_011208
Oryza longistaminata
OLONG_011208
I
0.735
Sb03g039470
Sorghum bicolor
Sb03g039470
I
0.733
GRMZM2G081919
Zea mays
GRMZM2G081919
I
0.728
OB05G26770
Oryza brachyantha
OB05G26770
N
0.728
GSMUA_Achr10G26610_001
Musa acuminata
GSMUA_Achr10G26610_001
I
0.725
SapurV1A.0001s1810
Salix purpurea
SapurV1A.0001s1810
I
0.725
TRAES3BF104600030CFD_g
Triticum aestivum
TRAES3BF104600030CFD_g
I
0.724
Traes_3DL_6BBC889A1
Triticum aestivum
Traes_3DL_6BBC889A1
I
0.724
Traes_3AL_386795528
Triticum aestivum
Traes_3AL_386795528
I
0.724
POPTR_0006s08570
Populus trichocarpa
POPTR_0006s08570
I
0.723
gene18416-v1.0-hybrid
Fragaria vesca
gene18416-v1.0-hybrid
I
0.723
Cucsa.175460
Cucumis sativus
Cucsa.175460
I
0.721
evm.TU.supercontig_228.17
Carica papaya
evm.TU.supercontig_228.17
I
0.719
Bostr.6251s0040
Boechera stricta
Bostr.6251s0040
I
0.719
orange1.1g009402m.g
Citrus sinensis
orange1.1g009402m.g
I
0.717
Ciclev10011452m.g
Citrus clementina
Ciclev10011452m.g
I
0.717
Bra029762
Brassica rapa
Bra029762
I
0.711
VIT_08s0007g00360
Vitis vinifera
VIT_08s0007g00360
I
0.711
Thhalv10020579m.g
Eutrema salsugineum
Thhalv10020579m.g
I
0.706
Bo5g139340
Brassica oleracea
Bo5g139340
I
0.706
29846.m000184
Ricinus communis
29846.m000184
I
0.705
Gorai.001G249400
Gossypium raimondii
Gorai.001G249400
I
0.705
Pm002704
Prunus mume
Pm002704
I
0.705
TCM_021936
Theobroma cacao
TCM_021936
I
0.705
PRUPE_ppa003208mg
Prunus persica
PRUPE_ppa003208mg
I
0.705
MYB3R5
Arabidopsis thaliana
AT5G02320
D
0.705
ATMYB3R5
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_6000124
I
0.705
Bo1g144510
Brassica oleracea
Bo1g144510
I
0.702
Bra034067
Brassica rapa
Bra034067
I
0.702
Cla018173
Citrullus lanatus
Cla018173
I
0.699
GLYMA07G15820
Glycine max
GLYMA07G15820
I
0.699
Carubv10000643m.g
Capsella rubella
Carubv10000643m.g
I
0.699
Cagra.0487s0012
Capsella grandiflora
Cagra.0487s0012
I
0.699
OPUNC05G16800
Oryza punctata
OPUNC05G16800
I
0.699
Gorai.006G172800
Gossypium raimondii
Gorai.006G172800
I
0.697
Thhalv10013211m.g
Eutrema salsugineum
Thhalv10013211m.g
I
0.696
MDP0000219581
Malus domestica
MDP0000219581
I
0.695
Aquca_003_00045
Aquilegia coerulea
Aquca_003_00045
I
0.695
fgenesh1_pg.C_scaffold_3000839
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_3000839
I
0.694
Solyc09g010820.2
Solanum lycopersicum
Solyc09g010820.2
I
0.694
MYB3R-3
Arabidopsis thaliana
AT3G09370
I
0.694
PGSC0003DMG400008908
Solanum tuberosum
PGSC0003DMG400008908
I
0.694
PK12011.1
Cannabis sativa
PK12011.1
D
0.694
MDP0000295807
Malus domestica
MDP0000295807
I
0.694
MDP0000179225
Malus domestica
MDP0000179225
I
0.687
chr1.CM0147.520.nd
Lotus japonicus
chr1.CM0147.520.nd
I
0.685
GSMUA_Achr7G10520_001
Musa acuminata
GSMUA_Achr7G10520_001
I
0.684
ORUFI05G20390
Oryza rufipogon
ORUFI05G20390
I
0.684
BGIOSGA017917
Oryza indica
BGIOSGA017917
I
0.684
OBART05G19200
Oryza barthii
OBART05G19200
I
0.684
ONIVA05G20060
Oryza nivara
ONIVA05G20060
I
0.684
cassava12645.valid.m1
Manihot esculenta
cassava12645.valid.m1
I
0.683
GLYMA18G39740
Glycine max
GLYMA18G39740
I
0.682
mgf019610m
Mimulus guttatus
mgf019610m
I
0.682
PRUPE_ppa000676mg
Prunus persica
PRUPE_ppa000676mg
I
0.681
MTR_1g026870
Medicago truncatula
MTR_1g026870
I
0.680
TRAES3BF049800070CFD_g
Triticum aestivum
TRAES3BF049800070CFD_g
I
0.679
MTR_7g461410
Medicago truncatula
MTR_7g461410
I
0.679
MTR_7g061330
Medicago truncatula
MTR_7g061330
I
0.679
Traes_3AS_09025DA2E
Triticum aestivum
Traes_3AS_09025DA2E
I
0.679
GLYMA03G19470
Glycine max
GLYMA03G19470
I
0.677
Bra009597
Brassica rapa
Bra009597
I
0.677
GSMUA_Achr6G05030_001
Musa acuminata
GSMUA_Achr6G05030_001
I
0.676
GLYMA06G08660
Glycine max
GLYMA06G08660
I
0.672
GLYMA04G08550
Glycine max
GLYMA04G08550
I
0.672
Bostr.22252s0130
Boechera stricta
Bostr.22252s0130
I
0.672
OPUNC01G07980
Oryza punctata
OPUNC01G07980
I
0.669
OPUNC01G08000
Oryza punctata
OPUNC01G08000
I
0.669
ORGLA05G0166300
Oryza glaberrima
ORGLA05G0166300
I
0.666
OS05G0459000
Oryza sativa
OS05G0459000
I
0.666
ONIVA01G10670
Oryza nivara
ONIVA01G10670
I
0.665
OB12G16480
Oryza brachyantha
OB12G16480
I
0.665
ORGLA12G0066300
Oryza glaberrima
ORGLA12G0066300
I
0.665
OS12G0238000
Oryza sativa
OS12G0238000
I
0.665
Traes_1AL_51EBF8930
Triticum aestivum
Traes_1AL_51EBF8930
N
0.665
OBART01G08110
Oryza barthii
OBART01G08110
I
0.665
OGLUM01G09290
Oryza glumaepatula
OGLUM01G09290
I
0.665
OLONG_011886
Oryza longistaminata
OLONG_011886
I
0.665
Ca_14925
Cicer arietinum
Ca_14925
I
0.663
mgf008601m
Mimulus guttatus
mgf008601m
I
0.663
Carubv10013377m.g
Capsella rubella
Carubv10013377m.g
I
0.662
Cagra.2515s0028
Capsella grandiflora
Cagra.2515s0028
I
0.662
Bo9g184660
Brassica oleracea
Bo9g184660
I
0.662
TRIUR3_24658
Triticum urartu
TRIUR3_24658
I
0.661