ZNF140 (Canis familiaris)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCAFG00000030275 T088575_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF140
M04621_2.00 		Homo sapiens
DRCAATTCCGCTCN
NGAGCGGAATTGYH		 SELEX
Yin et al.(2017)
ZNF140_eDBD_HT-SELEX 		0.802 0.947
ZNF140
M08372_2.00 		Homo sapiens
CAATTCYGCYCHNNNNNNNNNNNB
VNNNNNNNNNNNDGRGCRGAATTG		 ChIP-seq
Schmitges et al.(2016)
P52738_3-10.RCADE 		0.802 0.947
ZNF140
M08945_2.00 		Homo sapiens
NNNDNYBYWGCAATTCYRCTCCHN
NDGGAGYRGAATTGCWRVRNHNNN		 Misc
Kulakovskiy et al.(2013)
ZN140_HUMAN.H11MO.0.C 		0.802 0.947
ZNF140
M04622_2.00 		Homo sapiens
NRCAATTCCGCTCV
BGAGCGGAATTGYN		 SELEX
Yin et al.(2017)
ZNF140_eDBD_Methyl-HT-SELEX 		0.802 0.947
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000041220 C2H2 ZF 127 147
ENSCAFP00000041220 C2H2 ZF 153 175
ENSCAFP00000041220 C2H2 ZF 181 203
ENSCAFP00000041220 C2H2 ZF 209 231
ENSCAFP00000041220 C2H2 ZF 237 259
ENSCAFP00000041220 C2H2 ZF 265 287
ENSCAFP00000041220 C2H2 ZF 293 315
ENSCAFP00000041220 C2H2 ZF 321 343
ENSCAFP00000041220 C2H2 ZF 349 371
ENSCAFP00000041220 C2H2 ZF 377 399

Links

Other C2H2 ZF family TFs
Other Canis familiaris TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAI26006 Xenopus laevis AAI26006 I 0.000
Aan_R001655 Calypte anna Aan_R001655 I 0.000
AAO72733 Xenopus laevis AAO72733 I 0.000
ABF71072 Xenopus laevis ABF71072 I 0.000
Afo_R010338 Aptenodytes forsteri Afo_R010338 I 0.000
Alligator_sinensis_CCG014229.1 Alligator sinensis Alligator_sinensis_CCG014229.1 I 0.000
Brh_R012268 Buceros rhinoceros Brh_R012268 I 0.000
Cmyd_10008490 Chelonia mydas Cmyd_10008490 I 0.000
ENSAMXG00000019342 Astyanax mexicanus ENSAMXG00000019342 I 0.000
ENSAPLG00000002715 Anas platyrhynchos ENSAPLG00000002715 I 0.000
ENSFALG00000003396 Ficedula albicollis ENSFALG00000003396 I 0.000
ENSLOCG00000010146 Lepisosteus oculatus ENSLOCG00000010146 I 0.000
ENSORLG00000015698 Oryzias latipes ENSORLG00000015698 I 0.000
ENSPSIG00000010467 Pelodiscus sinensis ENSPSIG00000010467 I 0.000
ENSSHAG00000012129 Sarcophilus harrisii ENSSHAG00000012129 I 0.000
ENSTNIG00000019821 Tetraodon nigroviridis ENSTNIG00000019821 I 0.000
e_gw.35.150.1 Branchiostoma floridae e_gw.35.150.1 I 0.000
e_gw.35.42.1 Branchiostoma floridae e_gw.35.42.1 I 0.000
Gfo_R006824 Geospiza fortis Gfo_R006824 I 0.000
hif1a Xenopus tropicalis XB-GENE-946622 I 0.000
HIF1A Anolis carolinensis ENSACAG00000016205 I 0.000
HIF1A Gallus gallus ENSGALG00000011870 I 0.000
HIF1A Meleagris gallopavo ENSMGAG00000013552 I 0.000
HIF1A Monodelphis domestica ENSMODG00000008760 I 0.000
Hif1a Mus musculus ENSMUSG00000021109 D 0.000
HIF1A Taeniopygia guttata ENSTGUG00000012978 I 0.000
Ogr06281 Ophisaurus gracilis Ogr06281 I 0.000
Tal_R011146 Tyto alba Tal_R011146 I 0.000