ZNF454 (Canis familiaris)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCAFG00000031168 T088620_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF454
M04571_2.00 		Homo sapiens
WRGCGCCWGGCGCYW
WRGCGCCWGGCGCYW		 SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_1 		0.825 0.982
ZNF454
M04572_2.00 		Homo sapiens
TRGCGCCGGCGCYN
NRGCGCCGGCGCYA		 SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_2 		0.825 0.982
ZNF454
M08346_2.00 		Homo sapiens
KVVRNCHNYMRGGGCCNDGDGCCWTTB
VAAWGGCHCHNGGCCCYKRNDGNYBBM		 ChIP-seq
Schmitges et al.(2016)
Q8N9F8_4-12.RCADE 		0.825 0.982
ZNF454
M08256_2.00 		Homo sapiens
GWGCYTT
AARGCWC		 ChIP-seq
Najafabadi et al.(2015b)
ZNF454 		0.825 0.982
ZNF454
M07651_2.00 		Homo sapiens
CRKVVRHCCVYCRGGVCCBVGAGCCNKYB
VRMNGGCTCBVGGBCCYGRBRGDYBBMYG		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF454.MEME.OriginalMapping 		0.825 0.982
ZNF454
M04573_2.00 		Homo sapiens
WRGCGCCWGGCGCYW
WRGCGCCWGGCGCYW		 SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_1 		0.825 0.982
ZNF454
M04574_2.00 		Homo sapiens
TRGCGCCGGCGCYN
NRGCGCCGGCGCYA		 SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_2 		0.825 0.982
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000036135 C2H2 ZF 164 186
ENSCAFP00000036135 C2H2 ZF 203 225
ENSCAFP00000036135 C2H2 ZF 231 253
ENSCAFP00000036135 C2H2 ZF 259 281
ENSCAFP00000036135 C2H2 ZF 287 309
ENSCAFP00000036135 C2H2 ZF 315 337
ENSCAFP00000036135 C2H2 ZF 343 365
ENSCAFP00000036135 C2H2 ZF 371 393
ENSCAFP00000036135 C2H2 ZF 399 421
ENSCAFP00000036135 C2H2 ZF 427 449
ENSCAFP00000036135 C2H2 ZF 455 477
ENSCAFP00000036135 C2H2 ZF 483 505

Links

Other C2H2 ZF family TFs
Other Canis familiaris TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA037646 Oryza indica BGIOSGA037646 N 0.000
BRADI4G03867 Brachypodium distachyon BRADI4G03867 N 0.000
F775_32974 Aegilops tauschii F775_32974 N 0.000
GRMZM2G159475 Zea mays GRMZM2G159475 N 0.000
GRMZM2G179325 Zea mays GRMZM2G179325 N 0.000
MLOC_21297 Hordeum vulgare MLOC_21297 N 0.000
OB12G23410 Oryza brachyantha OB12G23410 N 0.000
OBART12G16530 Oryza barthii OBART12G16530 N 0.000
OGLUM12G18120 Oryza glumaepatula OGLUM12G18120 N 0.000
OMERI12G11530 Oryza meridionalis OMERI12G11530 N 0.000
ONIVA12G14900 Oryza nivara ONIVA12G14900 N 0.000
OPUNC12G15050 Oryza punctata OPUNC12G15050 N 0.000
ORGLA12G0145700 Oryza glaberrima ORGLA12G0145700 N 0.000
ORGLA12G0207400 Oryza glaberrima ORGLA12G0207400 N 0.000
ORUFI12G18360 Oryza rufipogon ORUFI12G18360 N 0.000
OS12G0573200 Oryza sativa OS12G0573200 N 0.000
Pavir.J08330 Panicum virgatum Pavir.J08330 N 0.000
Pavir.J28748 Panicum virgatum Pavir.J28748 N 0.000
Pavir.J38998 Panicum virgatum Pavir.J38998 N 0.000
Sb08g018940 Sorghum bicolor Sb08g018940 N 0.000
Traes_5BS_ED54C58C5 Triticum aestivum Traes_5BS_ED54C58C5 N 0.000
TRIUR3_22881 Triticum urartu TRIUR3_22881 N 0.000