ENSLACG00000006007 (Latimeria chalumnae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLACG00000006007 T097006_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB12
M08269_2.00 		Homo sapiens
NNRDTCTAGAACVYNNN
NNNRBGTTCTAGAHYNN		 ChIP-seq
Najafabadi et al.(2015b)
ZBTB12 		0.811 0.942
Zbtb12
M00146_2.00 		Mus musculus
NGTTCTARRN
NYYTAGAACN		 PBM
Badis et al.(2009)
Zbtb12_2932 		0.811 0.942
ZBTB12
M04633_2.00 		Homo sapiens
RGCTGRRCCGCGYN
NRCGCGGYYCAGCY		 SELEX
Yin et al.(2017)
ZBTB12_eDBD_HT-SELEX_1 		0.811 0.942
ZBTB12
M04634_2.00 		Homo sapiens
AVGACGGCAGGCCB
VGGCCTGCCGTCBT		 SELEX
Yin et al.(2017)
ZBTB12_eDBD_HT-SELEX_2 		0.811 0.942
ZBTB12
M08389_2.00 		Homo sapiens
CTAGAACMB
VKGTTCTAG		 ChIP-seq
Schmitges et al.(2016)
Q9Y330_1-3.RCADE 		0.811 0.942
ZBTB12
M04635_2.00 		Homo sapiens
AGCTGRRCCGCGYN
NRCGCGGYYCAGCT		 SELEX
Yin et al.(2017)
ZBTB12_eDBD_Methyl-HT-SELEX_1 		0.811 0.942
ZBTB12
M04636_2.00 		Homo sapiens
RMGACGDCAGGCCW
WGGCCTGHCGTCKY		 SELEX
Yin et al.(2017)
ZBTB12_eDBD_Methyl-HT-SELEX_2 		0.811 0.942
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000006769 C2H2 ZF 372 394
ENSLACP00000006769 C2H2 ZF 400 422
ENSLACP00000006769 C2H2 ZF 428 451

Links

Other C2H2 ZF family TFs
Other Latimeria chalumnae TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG007024.1 Alligator sinensis Alligator_sinensis_CCG007024.1 I 0.807
ENSAMEG00000012921 Ailuropoda melanoleuca ENSAMEG00000012921 I 0.811
ENSGGOG00000015638 Gorilla gorilla ENSGGOG00000015638 I 0.811
ENSMODG00000015096 Monodelphis domestica ENSMODG00000015096 I 0.811
ENSMPUG00000018357 Mustela putorius furo ENSMPUG00000018357 I 0.811
ENSPANG00000003484 Papio anubis ENSPANG00000003484 I 0.811
ENSSHAG00000008383 Sarcophilus harrisii ENSSHAG00000008383 I 0.811
ENSSTOG00000027411 Ictidomys tridecemlineatus ENSSTOG00000027411 I 0.811
Myotis_brandtii_ZBTB12_10007235 Myotis brandtii Myotis_brandtii_ZBTB12_10007235 I 0.811
Ogr11440 Ophisaurus gracilis Ogr11440 I 0.814
Pvit_00817 Pogona vitticeps Pvit_00817 I 0.814
XP_002943018 Xenopus tropicalis XP_002943018 I 0.811
Zbtb12 Rattus norvegicus ENSRNOG00000000418 I 0.811
ZBTB12 Bos taurus ENSBTAG00000032031 I 0.811
ZBTB12 Sus scrofa ENSSSCG00000001421 I 0.811
ZBTB12 Homo sapiens ENSG00000204366 D 0.811
ZBTB12 Pteropus vampyrus ENSPVAG00000005130 I 0.811
ZBTB12 Pan troglodytes ENSPTRG00000017993 I 0.811
ZBTB12 Anolis carolinensis ENSACAG00000011189 I 0.814
ZBTB12 Otolemur garnettii ENSOGAG00000031042 I 0.811
Zbtb12 Mus musculus ENSMUSG00000049823 D 0.811
ZBTB12 Canis familiaris ENSCAFG00000000674 I 0.811
ZBTB12 Felis catus ENSFCAG00000031296 I 0.811
ZBTB12 Macaca mulatta ENSMMUG00000011683 I 0.811
ZBTB12 Microcebus murinus ENSMICG00000003600 I 0.811
zbtb12.L Xenopus laevis XB-GENE-865454 I 0.811