ENSPCAG00000000615 (Procavia capensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPCAG00000000615 T105648_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF135
M05851_2.00 		Homo sapiens
RGCTYRACCTCARDD
HHYTGAGGTYRAGCY		 SMiLE-seq
Isakova et al.(2017)
ZNF135 		0.813 0.967
ZNF135
M07647_2.00 		Homo sapiens
TCGACCTCC
GGAGGTCGA		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF135.RCADE.ReprocessedData 		0.813 0.967
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000000573 C2H2 ZF 151 173
ENSPCAP00000000573 C2H2 ZF 179 201
ENSPCAP00000000573 C2H2 ZF 207 229
ENSPCAP00000000573 C2H2 ZF 235 257
ENSPCAP00000000573 C2H2 ZF 263 285
ENSPCAP00000000573 C2H2 ZF 291 313
ENSPCAP00000000573 C2H2 ZF 319 341
ENSPCAP00000000573 C2H2 ZF 347 369
ENSPCAP00000000573 C2H2 ZF 375 397
ENSPCAP00000000573 C2H2 ZF 403 425
ENSPCAP00000000573 C2H2 ZF 431 453
ENSPCAP00000000573 C2H2 ZF 459 481
ENSPCAP00000000573 C2H2 ZF 487 509
ENSPCAP00000000573 C2H2 ZF 515 537
ENSPCAP00000000573 C2H2 ZF 543 565
ENSPCAP00000000573 C2H2 ZF 571 593

Links

Other C2H2 ZF family TFs
Other Procavia capensis TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29661.m000923 Ricinus communis 29661.m000923 N
Aquca_060_00005 Aquilegia coerulea Aquca_060_00005 N
cassava32963.m1 Manihot esculenta cassava32963.m1 N
cassava7505.valid.m1 Manihot esculenta cassava7505.valid.m1 N
Ca_02226 Cicer arietinum Ca_02226 N
Ca_09352 Cicer arietinum Ca_09352 N
chr2.CM0168.260.nc Lotus japonicus chr2.CM0168.260.nc N
Ciclev10025470m.g Citrus clementina Ciclev10025470m.g N
Cla014238 Citrullus lanatus Cla014238 N
Cucsa.103160 Cucumis sativus Cucsa.103160 N
Eucgr.I00704 Eucalyptus grandis Eucgr.I00704 N
evm.TU.supercontig_6.17 Carica papaya evm.TU.supercontig_6.17 N
gene05757-v1.0-hybrid Fragaria vesca gene05757-v1.0-hybrid N
GLYMA01G40180 Glycine max GLYMA01G40180 N
GLYMA05G22460 Glycine max GLYMA05G22460 N
GLYMA11G05110 Glycine max GLYMA11G05110 N
GLYMA17G17400 Glycine max GLYMA17G17400 N
Gorai.003G030400 Gossypium raimondii Gorai.003G030400 N
Gorai.007G223500 Gossypium raimondii Gorai.007G223500 N
Gorai.008G083500 Gossypium raimondii Gorai.008G083500 N
MDP0000171602 Malus domestica MDP0000171602 N
MDP0000687763 Malus domestica MDP0000687763 N
MDP0000822651 Malus domestica MDP0000822651 N
MDP0000840369 Malus domestica MDP0000840369 N
mgf023910m Mimulus guttatus mgf023910m N
MTR_4g097080 Medicago truncatula MTR_4g097080 N
MTR_5g015490 Medicago truncatula MTR_5g015490 N
orange1.1g035867m.g Citrus sinensis orange1.1g035867m.g N
PGSC0003DMG400021444 Solanum tuberosum PGSC0003DMG400021444 N
PK04147.1 Cannabis sativa PK04147.1 N
PK11022.1 Cannabis sativa PK11022.1 N
Pm002381 Prunus mume Pm002381 N
PRUPE_ppa004454mg Prunus persica PRUPE_ppa004454mg N
SapurV1A.0461s0030 Salix purpurea SapurV1A.0461s0030 N
SapurV1A.0865s0070 Salix purpurea SapurV1A.0865s0070 N
SHR Vitis vinifera VIT_07s0129g00030 N
SHR Populus trichocarpa POPTR_0012s06430 N
Solyc02g092370.1 Solanum lycopersicum Solyc02g092370.1 N
TCM_000801 Theobroma cacao TCM_000801 N