CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPPYG00000010464
(
Pongo abelii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPPYG00000010464
T107034_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF548
M07691_2.00
Homo sapiens
CCTGCHGVCVCCBBSVYYBBG
CVVRRBSVVGGBGBCDGCAGG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF548.RCADE.OriginalMapping
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPPYP00000011726
C2H2 ZF
200
222
YKCSECGKTFTCSYSFVEHQKIH
ENSPPYP00000011726
C2H2 ZF
228
250
YECNKCGKFFKYSANFMKHQTVH
ENSPPYP00000011726
C2H2 ZF
256
278
YECRECGKSFMYNYRLMRHKRVH
ENSPPYP00000011726
C2H2 ZF
284
306
YECNTCGKFFRYSSTFVRHQRVH
ENSPPYP00000011726
C2H2 ZF
312
334
YECRECGKFFMDSSTLIKHQRVH
ENSPPYP00000011726
C2H2 ZF
340
362
YKCNDCGKFFRYISTLIRHQRIH
ENSPPYP00000011726
C2H2 ZF
368
390
YECSVCGELFRYNSSLVKHWRNH
ENSPPYP00000011726
C2H2 ZF
396
418
YKCSECGKSFRYHCRLIRHQRVH
ENSPPYP00000011726
C2H2 ZF
424
446
YECSECGKFFRYNSNLIKHWRNH
ENSPPYP00000011726
C2H2 ZF
452
474
YECRECGKAFSHKHILVEHQKIH
ENSPPYP00000011726
C2H2 ZF
480
502
YECSECQKAFIRKSHLVHHQKIH
Links
Other
C2H2 ZF
family TFs
Other
Pongo abelii
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GA24777
Drosophila pseudoobscura
FBgn0246163
I
GD10717
Drosophila simulans
FBgn0182481
I
GE19341
Drosophila yakuba
FBgn0236687
I
gem
Drosophila melanogaster
FBgn0050011
D
GF12780
Drosophila ananassae
FBgn0089814
I
GG24145
Drosophila erecta
FBgn0116278
I
GH21767
Drosophila grimshawi
FBgn0129228
I
GI19314
Drosophila mojavensis
FBgn0142052
I
GJ22192
Drosophila virilis
FBgn0209305
I
GL11578
Drosophila persimilis
FBgn0149187
I
GM21189
Drosophila sechellia
FBgn0176070
I
LCUP002159
Lucilia cuprina
LCUP002159
N
MDOA006741
Musca domestica
MDOA006741
I