Zfp384 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000017066 T109045_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF384
M04451_2.00 		Homo sapiens
TTTTBNNNNNNNNNNNNVAAAA
TTTTBNNNNNNNNNNNNVAAAA		 SELEX
Yin et al.(2017)
ZNF384_eDBD_HT-SELEX 		0.810 0.995
ZNF384
M08306_2.00 		Homo sapiens
CTTTTTTTT
AAAAAAAAG		 ChIP-seq
Schmitges et al.(2016)
Q8TF68_1-3.RCADE 		0.810 0.995
ZNF384
M08090_2.00 		Homo sapiens
WTTTTTTTNHNN
NNDNAAAAAAAW		 ChIP-seq
Mathelier et al.(2014)
MA1125.1 		0.810 0.995
ZNF384
M08888_2.00 		Homo sapiens
BVNNBTTTTTSC
GSAAAAAVNNBV		 Misc
Kulakovskiy et al.(2013)
ZN384_HUMAN.H11MO.0.C 		0.810 0.995
ZNF384
M10209_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CIZ_01 		0.810 0.995
ZNF384
M04452_2.00 		Homo sapiens
KTTTYHNNNNNNNNNNDRAAAV
BTTTYHNNNNNNNNNNDRAAAM		 SELEX
Yin et al.(2017)
ZNF384_eDBD_Methyl-HT-SELEX 		0.810 0.995
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000023192 C2H2 ZF 229 251
ENSRNOP00000023192 C2H2 ZF 257 279
ENSRNOP00000023192 C2H2 ZF 285 307
ENSRNOP00000023192 C2H2 ZF 318 340
ENSRNOP00000023192 C2H2 ZF 346 368
ENSRNOP00000023192 C2H2 ZF 374 398
ENSRNOP00000023192 C2H2 ZF 404 426
ENSRNOP00000023192 C2H2 ZF 434 456
ENSRNOP00000023242 C2H2 ZF 229 251
ENSRNOP00000023242 C2H2 ZF 257 279
ENSRNOP00000023242 C2H2 ZF 285 307
ENSRNOP00000023242 C2H2 ZF 313 337
ENSRNOP00000023242 C2H2 ZF 343 365
ENSRNOP00000023242 C2H2 ZF 373 395
ENSRNOP00000037592 C2H2 ZF 213 235
ENSRNOP00000037592 C2H2 ZF 241 263
ENSRNOP00000037592 C2H2 ZF 269 291
ENSRNOP00000037592 C2H2 ZF 302 324
ENSRNOP00000037592 C2H2 ZF 330 352
ENSRNOP00000037592 C2H2 ZF 358 382
ENSRNOP00000037592 C2H2 ZF 388 410
ENSRNOP00000037592 C2H2 ZF 418 440
ENSRNOP00000052839 C2H2 ZF 229 251
ENSRNOP00000052839 C2H2 ZF 257 279
ENSRNOP00000052839 C2H2 ZF 285 307
ENSRNOP00000052839 C2H2 ZF 318 340
ENSRNOP00000052839 C2H2 ZF 346 368
ENSRNOP00000052839 C2H2 ZF 374 398
ENSRNOP00000052839 C2H2 ZF 404 426
ENSRNOP00000052839 C2H2 ZF 434 456
ENSRNOP00000072846 C2H2 ZF 229 251
ENSRNOP00000072846 C2H2 ZF 257 279
ENSRNOP00000072846 C2H2 ZF 285 307
ENSRNOP00000072846 C2H2 ZF 318 340
ENSRNOP00000072846 C2H2 ZF 346 368
ENSRNOP00000072846 C2H2 ZF 374 398
ENSRNOP00000072846 C2H2 ZF 404 426
ENSRNOP00000072846 C2H2 ZF 434 456
ENSRNOP00000074298 C2H2 ZF 262 282
ENSRNOP00000074298 C2H2 ZF 288 310
ENSRNOP00000074298 C2H2 ZF 316 338
ENSRNOP00000074298 C2H2 ZF 349 371
ENSRNOP00000074298 C2H2 ZF 377 397

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28779.m000140 Ricinus communis 28779.m000140 I 0.000
Aquca_027_00443 Aquilegia coerulea Aquca_027_00443 I 0.000
AT1G19490 Arabidopsis thaliana AT1G19490 D 0.000
Bo5g027510 Brassica oleracea Bo5g027510 I 0.000
Bostr.7128s0552 Boechera stricta Bostr.7128s0552 I 0.000
Bra025743 Brassica rapa Bra025743 I 0.000
Cagra.1961s0053 Capsella grandiflora Cagra.1961s0053 I 0.000
Carubv10011417m.g Capsella rubella Carubv10011417m.g I 0.000
cassava31755.valid.m1 Manihot esculenta cassava31755.valid.m1 I 0.000
Ca_00780 Cicer arietinum Ca_00780 I 0.000
Ciclev10013541m.g Citrus clementina Ciclev10013541m.g I 0.000
Cla017983 Citrullus lanatus Cla017983 I 0.000
Cucsa.240980 Cucumis sativus Cucsa.240980 I 0.000
evm.TU.supercontig_5.51 Carica papaya evm.TU.supercontig_5.51 I 0.000
gene30252-v1.0-hybrid Fragaria vesca gene30252-v1.0-hybrid I 0.000
GLYMA03G35101 Glycine max GLYMA03G35101 I 0.000
GLYMA19G37801 Glycine max GLYMA19G37801 I 0.000
Gorai.009G405400 Gossypium raimondii Gorai.009G405400 I 0.000
GSMUA_Achr5G17460_001 Musa acuminata GSMUA_Achr5G17460_001 N 0.000
Lus10035597.g Linum usitatissimum Lus10035597.g I 0.000
MDP0000121603 Malus domestica MDP0000121603 N 0.000
MDP0000147745 Malus domestica MDP0000147745 I 0.000
MDP0000203904 Malus domestica MDP0000203904 I 0.000
MDP0000374836 Malus domestica MDP0000374836 N 0.000
MTR_7g104190 Medicago truncatula MTR_7g104190 I 0.000
orange1.1g011345m.g Citrus sinensis orange1.1g011345m.g I 0.000
PK09783.1 Cannabis sativa PK09783.1 I 0.000
POPTR_0006s11550 Populus trichocarpa POPTR_0006s11550 I 0.000
PRUPE_ppa003901mg Prunus persica PRUPE_ppa003901mg I 0.000
SapurV1A.0208s0130 Salix purpurea SapurV1A.0208s0130 I 0.000
Solyc09g009760.1 Solanum lycopersicum Solyc09g009760.1 I 0.000
TCM_022516 Theobroma cacao TCM_022516 I 0.000
Thhalv10009681m.g Eutrema salsugineum Thhalv10009681m.g I 0.000
VIT_08s0007g03640 Vitis vinifera VIT_08s0007g03640 I 0.000