ZBTB18 (Tursiops truncatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTTRG00000000615 T112937_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB18
M02916_2.00 		Homo sapiens
VMACATCTGGAWN
NWTCCAGATGTKB		 SELEX
Jolma et al.(2013)
ZNF238_1 		0.827 1.000
ZBTB18
M02917_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Jolma et al.(2013)
ZNF238_2 		0.827 1.000
ZBTB18
M04585_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_HT-SELEX 		0.827 1.000
ZBTB18
M08350_2.00 		Homo sapiens
MRCAKCTGG
CCAGMTGYK		 ChIP-seq
Schmitges et al.(2016)
Q99592_2-4.RCADE 		0.827 1.000
ZBTB18
M08257_2.00 		Homo sapiens
NMGCAGCTGCKB
VMGCAGCTGCKN		 ChIP-seq
Najafabadi et al.(2015b)
ZNF238 		0.827 1.000
ZBTB18
M08928_2.00 		Homo sapiens
VMRCAKCTGGV
BCCAGMTGYKB		 Misc
Kulakovskiy et al.(2013)
ZBT18_HUMAN.H11MO.0.C 		0.827 1.000
ZBTB18
M10282_2.00 		Homo sapiens
NNMACATCTGGM
KCCAGATGTKNN		 Transfac
Matys et al.(2006)
V$RP58_01 		0.827 1.000
ZBTB18
M10283_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RP58_Q3 		0.827 1.000
ZBTB18
M04586_2.00 		Homo sapiens
NMACATCTGBHNN
NNDVCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_Methyl-HT-SELEX 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTTRP00000000578 C2H2 ZF 379 401
ENSTTRP00000000578 C2H2 ZF 420 441
ENSTTRP00000000578 C2H2 ZF 447 469
ENSTTRP00000000578 C2H2 ZF 475 498

Links

Other C2H2 ZF family TFs
Other Tursiops truncatus TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo1g014710 Brassica oleracea Bo1g014710 I 0.000
Bo3g175850 Brassica oleracea Bo3g175850 I 0.000
Bostr.7867s0841 Boechera stricta Bostr.7867s0841 I 0.000
Bra010310 Brassica rapa Bra010310 I 0.000
Bra011153 Brassica rapa Bra011153 I 0.000
Cagra.0268s0009 Capsella grandiflora Cagra.0268s0009 I 0.000
Carubv10004175m.g Capsella rubella Carubv10004175m.g I 0.000
cassava27173.m1 Manihot esculenta cassava27173.m1 I 0.000
Ca_08838 Cicer arietinum Ca_08838 I 0.000
chr4.CM0244.10.nd Lotus japonicus chr4.CM0244.10.nd I 0.000
Cla019142 Citrullus lanatus Cla019142 N 0.000
Cucsa.081360 Cucumis sativus Cucsa.081360 N 0.000
Eucgr.C00114 Eucalyptus grandis Eucgr.C00114 I 0.000
gene17249-v1.0-hybrid Fragaria vesca gene17249-v1.0-hybrid I 0.000
GLYMA09G06730 Glycine max GLYMA09G06730 I 0.000
GLYMA13G00540 Glycine max GLYMA13G00540 I 0.000
GLYMA15G17956 Glycine max GLYMA15G17956 I 0.000
GLYMA17G06690 Glycine max GLYMA17G06690 I 0.000
Gorai.009G002500 Gossypium raimondii Gorai.009G002500 I 0.000
GSMUA_Achr8G23890_001 Musa acuminata GSMUA_Achr8G23890_001 N 0.000
LPERR02G03280 Leersia perrieri LPERR02G03280 N 0.000
Lus10015536.g Linum usitatissimum Lus10015536.g N 0.000
mgf003961m Mimulus guttatus mgf003961m I 0.000
MTR_2g038000 Medicago truncatula MTR_2g038000 D 0.000
PGSC0003DMG400028740 Solanum tuberosum PGSC0003DMG400028740 I 0.000
Pm008905 Prunus mume Pm008905 I 0.000
POPTR_0006s07520 Populus trichocarpa POPTR_0006s07520 N 0.000
POPTR_0018s13920 Populus trichocarpa POPTR_0018s13920 N 0.000
PRHA Arabidopsis lyrata scaffold_701235.1 I 0.000
PRUPE_ppa023964mg Prunus persica PRUPE_ppa023964mg I 0.000
SapurV1A.0140s0170 Salix purpurea SapurV1A.0140s0170 N 0.000
Solyc07g008730.1 Solanum lycopersicum Solyc07g008730.1 I 0.000
Thhalv10024489m.g Eutrema salsugineum Thhalv10024489m.g I 0.000